RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 ERLIN2O94905 339 aa10.78□□□□□ -0.68
SRRT-208ENST00000469602 EOMESO95936 686 aa10.78□□□□□ -0.68
SRRT-208ENST00000469602 LINC00271P0C7V0 271 aa10.78□□□□□ -0.68
SRRT-208ENST00000469602 ZSCAN22P10073 491 aaPredicted RBP10.78□□□□□ -0.68
SRRT-208ENST00000469602 FGFR1P11362 822 aa10.78□□□□□ -0.68
SRRT-208ENST00000469602 SKIP12755 728 aa10.78□□□□□ -0.68
SRRT-208ENST00000469602 HOXA11P31270 313 aaPredicted RBP10.78□□□□□ -0.68
SRRT-208ENST00000469602 UBA7P41226 1012 aa10.78□□□□□ -0.68
SRRT-208ENST00000469602 GATMP50440 423 aa10.78□□□□□ -0.68
SRRT-208ENST00000469602 CEBPZQ03701 1054 aaKnown RBP10.78□□□□□ -0.68
SRRT-208ENST00000469602 GRIN1Q05586 938 aa10.78□□□□□ -0.68
SRRT-208ENST00000469602 TMEM119Q4V9L6 283 aa10.78□□□□□ -0.68
SRRT-208ENST00000469602 PAN2Q504Q3 1202 aaKnown RBP10.78□□□□□ -0.68
SRRT-208ENST00000469602 CDCA2Q69YH5 1023 aaPredicted RBP10.78□□□□□ -0.68
SRRT-208ENST00000469602 ZNF598Q86UK7 904 aaKnown RBP10.78□□□□□ -0.68
SRRT-208ENST00000469602 CABP7Q86V35 215 aa10.78□□□□□ -0.68
SRRT-208ENST00000469602 RNF169Q8NCN4 708 aa10.78□□□□□ -0.68
SRRT-208ENST00000469602 KIFAP3Q92845 792 aa10.78□□□□□ -0.68
SRRT-208ENST00000469602 CDK5RAP3Q96JB5 506 aa10.78□□□□□ -0.68
SRRT-208ENST00000469602 PLIN2Q99541 437 aa10.78□□□□□ -0.68
SRRT-208ENST00000469602 MTCH2Q9Y6C9 303 aa10.78□□□□□ -0.68
SRRT-208ENST00000469602 MRPL42Q9Y6G3 142 aaKnown RBP10.78□□□□□ -0.68
SRRT-208ENST00000469602 MORC2Q9Y6X9 1032 aaPredicted RBP10.78□□□□□ -0.68
SRRT-208ENST00000469602 ATG2AQ2TAZ0 1938 aa10.78□□□□□ -0.68
SRRT-208ENST00000469602 LRRIQ4A6NIV6 560 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 TBKBP1A7MCY6 615 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 C5orf67F2Z3F1 127 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 H3BNC9 293 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 TSPAN1O60635 241 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 RB1P06400 928 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 ATF7P17544 494 aaPredicted RBP10.77□□□□□ -0.69
SRRT-208ENST00000469602 MARCKSP29966 332 aaPredicted RBP10.77□□□□□ -0.69
SRRT-208ENST00000469602 AXLP30530 894 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 CTNNB1P35222 781 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 BMPR1AP36894 532 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 NAMPTP43490 491 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 NASPP49321 788 aaPredicted RBP10.77□□□□□ -0.69
SRRT-208ENST00000469602 RAB27AP51159 221 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 NCBP1Q09161 790 aaKnown RBP10.77□□□□□ -0.69
SRRT-208ENST00000469602 SLC39A14Q15043 492 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 PPP2R5AQ15172 486 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 AMHR2Q16671 573 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 CLLU1OSQ5K130 101 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 RINT1Q6NUQ1 792 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 C1orf186Q6ZWK4 172 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 ZBTB8OSQ8IWT0 167 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 BSNDQ8WZ55 320 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 CALML4Q96GE6 196 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 USP28Q96RU2 1077 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 RUSC1Q9BVN2 902 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 PLVAPQ9BX97 442 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 TMEM117Q9H0C3 514 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 FAM105AQ9NUU6 356 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 RNF19AQ9NV58 838 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 LMCD1Q9NZU5 365 aa10.77□□□□□ -0.69
SRRT-208ENST00000469602 FBXO2Q9UK22 296 aaPredicted RBP10.77□□□□□ -0.69
SRRT-208ENST00000469602 SRPRBQ9Y5M8 271 aaKnown RBP10.77□□□□□ -0.69
SRRT-208ENST00000469602 PLXNA4Q9HCM2 1894 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 ZNF623O75123 536 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 F13A1P00488 732 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 SSBP05455 408 aaKnown RBP eCLIP10.76□□□□□ -0.69
SRRT-208ENST00000469602 PLA2G4BP0C869 781 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 GUCY2CP25092 1073 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 SLC12A3P55017 1021 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 GPM6BQ13491 265 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 PKP1Q13835 747 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 UBXN11Q5T124 520 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 FOXD4L5Q5VV16 416 aaPredicted RBP10.76□□□□□ -0.69
SRRT-208ENST00000469602 NOTUMQ6P988 496 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 ABI1Q8IZP0 508 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 SYT2Q8N9I0 419 aaPredicted RBP10.76□□□□□ -0.69
SRRT-208ENST00000469602 RASSF8Q8NHQ8 419 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 DEPTORQ8TB45 409 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 FOXD4L4Q8WXT5 416 aaPredicted RBP10.76□□□□□ -0.69
SRRT-208ENST00000469602 CCDC51Q96ER9 411 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 IFT74Q96LB3 600 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 PRIMPOLQ96LW4 560 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 DRC1Q96MC2 740 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 ZNF396Q96N95 335 aaPredicted RBP10.76□□□□□ -0.69
SRRT-208ENST00000469602 CASD1Q96PB1 797 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 C11orf84Q9BUA3 381 aaPredicted RBP10.76□□□□□ -0.69
SRRT-208ENST00000469602 TIPINQ9BVW5 301 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 CCSER1Q9C0I3 900 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 CSRNP2Q9H175 543 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 C2orf40Q9H1Z8 148 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 POLD4Q9HCU8 107 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 PRMT7Q9NVM4 692 aaPredicted RBP10.76□□□□□ -0.69
SRRT-208ENST00000469602 KCND2Q9NZV8 630 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 PCDHB2Q9Y5E7 798 aa10.76□□□□□ -0.69
SRRT-208ENST00000469602 BDP1A6H8Y1 2624 aa10.75□□□□□ -0.69
SRRT-208ENST00000469602 TTC28Q96AY4 2481 aa10.75□□□□□ -0.69
SRRT-208ENST00000469602 B4GALT5O43286 388 aa10.75□□□□□ -0.69
SRRT-208ENST00000469602 HIP1RO75146 1068 aa10.75□□□□□ -0.69
SRRT-208ENST00000469602 ARF4P18085 180 aaPredicted RBP10.75□□□□□ -0.69
SRRT-208ENST00000469602 PLCG1P19174 1290 aa10.75□□□□□ -0.69
SRRT-208ENST00000469602 EFNA5P52803 228 aa10.75□□□□□ -0.69
SRRT-208ENST00000469602 KARSQ15046 597 aaKnown RBP10.75□□□□□ -0.69
SRRT-208ENST00000469602 STK38Q15208 465 aa10.75□□□□□ -0.69
SRRT-208ENST00000469602 CCDC85BQ15834 202 aaPredicted RBP10.75□□□□□ -0.69
SRRT-208ENST00000469602 MAPK6Q16659 721 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms