RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 TMEM134Q9H6X4 195 aa9.28□□□□□ -0.92
GAPVD1-213ENST00000469498 PDLIM7Q9NR12 457 aa9.28□□□□□ -0.92
GAPVD1-213ENST00000469498 TRMT13Q9NUP7 481 aaKnown RBP9.28□□□□□ -0.92
GAPVD1-213ENST00000469498 MAN1B1Q9UKM7 699 aa9.28□□□□□ -0.92
GAPVD1-213ENST00000469498 TDRD15B5MCY1 1934 aaKnown RBP9.28□□□□□ -0.92
GAPVD1-213ENST00000469498 PTPRSQ13332 1948 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 IGKV6-21A0A0C4DH24 114 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 MBLAC1A4D2B0 266 aaPredicted RBP9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 LRRIQ4A6NIV6 560 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 K7ENM7 598 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 ARVCFO00192 962 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 MAGEB2O15479 319 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 GAS2O43903 313 aaKnown RBP9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 VTNP04004 478 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 GNAT1P11488 350 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 GAP43P17677 238 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 PEX3P56589 373 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 ADAM17P78536 824 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 TMEM62Q0P6H9 643 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 PTGISQ16647 500 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 FAM26FQ5R3K3 315 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 ODR4Q5SWX8 454 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 CNNM4Q6P4Q7 775 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 RBM43Q6ZSC3 357 aaKnown RBP9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 LAPTM4BQ86VI4 370 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 SESTD1Q86VW0 696 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 RHPN2Q8IUC4 686 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 KSR1Q8IVT5 923 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 SMYD4Q8IYR2 804 aaPredicted RBP9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 LINC01465Q8N7H1 131 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 ANKLE1Q8NAG6 615 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 TCP11Q8WWU5 503 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 PSPC1Q8WXF1 523 aaKnown RBP9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 KIFAP3Q92845 792 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 WNT8BQ93098 351 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 PAWRQ96IZ0 340 aaKnown RBP9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 NLRP4Q96MN2 994 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 SCLT1Q96NL6 688 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 MAP7D2Q96T17 732 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 JPH2Q9BR39 696 aaPredicted RBP9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 KIFC3Q9BVG8 833 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 TIPINQ9BVW5 301 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 FGFBP2Q9BYJ0 223 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 PARVGQ9HBI0 331 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 SUCLA2Q9P2R7 463 aaPredicted RBP9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 NOD1Q9Y239 953 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 AKT3Q9Y243 479 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 GDAQ9Y2T3 454 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 PCDHA2Q9Y5H9 948 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 COL4A3BPQ9Y5P4 624 aa9.27□□□□□ -0.93
GAPVD1-213ENST00000469498 PVALEFA0A1B0GWK0 134 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 FRMD3A2A2Y4 597 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 CCDC169A6NNP5 214 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 RBAK-RBAKDNI3L0D1 243 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 SLC16A4O15374 487 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 B4GALT4O60513 344 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 PQBP1O60828 265 aaKnown RBP9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 RHOBTB3O94955 611 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 CTSHP09668 335 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 COL6A1P12109 1028 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 PLS3P13797 630 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 EN2P19622 333 aaPredicted RBP9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 GLRA2P23416 452 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 TMOD1P28289 359 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 NMT1P30419 496 aaKnown RBP9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 ARL2P36404 184 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 SARSP49591 514 aaKnown RBP9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 DNM2P50570 870 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 CASP5P51878 434 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 ZNF131P52739 623 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 PTPN11Q06124 597 aaPredicted RBP9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 LAMTOR4Q0VGL1 99 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 DMP1Q13316 513 aaPredicted RBP9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 CAPSQ13938 189 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 TRIM60Q495X7 471 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 HERC4Q5GLZ8 1057 aaPredicted RBP9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 IER5Q5VY09 327 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 SASS6Q6UVJ0 657 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 EXOC8Q8IYI6 725 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 SLC43A3Q8NBI5 491 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 GLIS3Q8NEA6 775 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 SPATA20Q8TB22 786 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 DNAJB3Q8WWF6 145 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 ABHD8Q96I13 439 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 IFT74Q96LB3 600 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 GSDMAQ96QA5 445 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 CTAGE1Q96RT6 745 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 TRPV6Q9H1D0 765 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 C11orf49Q9H6J7 331 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 MRPL44Q9H9J2 332 aaKnown RBP9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 SLC39A2Q9NP94 309 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 KMT5AQ9NQR1 393 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 RMND1Q9NWS8 449 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 ADGRA3Q8IWK6 1321 aa9.26□□□□□ -0.93
GAPVD1-213ENST00000469498 SMIM35A0A1B0GVV1 85 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 GCNT3O95395 438 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 SRGAP2CP0DJJ0 459 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 MYBP10242 640 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 NAMPTP43490 491 aa9.25□□□□□ -0.93
GAPVD1-213ENST00000469498 NPTX2P47972 431 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms