RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 ZNF277Q9NRM2 450 aaPredicted RBP6.34□□□□□ -1.39
VPS8-219ENST00000469479 ADARB2Q9NS39 739 aaKnown RBP6.34□□□□□ -1.39
VPS8-219ENST00000469479 SLC4A7Q9Y6M7 1214 aa6.34□□□□□ -1.39
VPS8-219ENST00000469479 ARFGEF2Q9Y6D5 1785 aa6.34□□□□□ -1.4
VPS8-219ENST00000469479 A0A0C4DFX4 3053 aa6.33□□□□□ -1.4
VPS8-219ENST00000469479 H7BY64 318 aa6.33□□□□□ -1.4
VPS8-219ENST00000469479 CELF2O95319 508 aaKnown RBP6.33□□□□□ -1.4
VPS8-219ENST00000469479 COL6A1P12109 1028 aa6.33□□□□□ -1.4
VPS8-219ENST00000469479 EIF5P55010 431 aaKnown RBP6.33□□□□□ -1.4
VPS8-219ENST00000469479 EIF4A2Q14240 407 aaKnown RBP6.33□□□□□ -1.4
VPS8-219ENST00000469479 USP39Q53GS9 565 aaKnown RBP6.33□□□□□ -1.4
VPS8-219ENST00000469479 TRIM59Q8IWR1 403 aa6.33□□□□□ -1.4
VPS8-219ENST00000469479 NUDT10Q8NFP7 164 aa6.33□□□□□ -1.4
VPS8-219ENST00000469479 PHOSPHO1Q8TCT1 267 aa6.33□□□□□ -1.4
VPS8-219ENST00000469479 NUDT11Q96G61 164 aa6.33□□□□□ -1.4
VPS8-219ENST00000469479 IKZF4Q9H2S9 585 aa6.33□□□□□ -1.4
VPS8-219ENST00000469479 SLC52A2Q9HAB3 445 aa6.33□□□□□ -1.4
VPS8-219ENST00000469479 GINM1Q9NU53 330 aa6.33□□□□□ -1.4
VPS8-219ENST00000469479 ZFR2Q9UPR6 939 aaKnown RBP6.33□□□□□ -1.4
VPS8-219ENST00000469479 ZBTB1Q9Y2K1 713 aa6.33□□□□□ -1.4
VPS8-219ENST00000469479 TNFRSF18Q9Y5U5 241 aa6.33□□□□□ -1.4
VPS8-219ENST00000469479 KIF20BQ96Q89 1820 aa6.33□□□□□ -1.4
VPS8-219ENST00000469479 KLRG2A4D1S0 409 aaPredicted RBP6.32□□□□□ -1.4
VPS8-219ENST00000469479 NARSO43776 548 aaKnown RBP6.32□□□□□ -1.4
VPS8-219ENST00000469479 MAFKO60675 156 aa6.32□□□□□ -1.4
VPS8-219ENST00000469479 KLHL18O94889 574 aa6.32□□□□□ -1.4
VPS8-219ENST00000469479 COMTP21964 271 aa6.32□□□□□ -1.4
VPS8-219ENST00000469479 IL6STP40189 918 aaPredicted RBP6.32□□□□□ -1.4
VPS8-219ENST00000469479 SOX9P48436 509 aa6.32□□□□□ -1.4
VPS8-219ENST00000469479 INHBCP55103 352 aa6.32□□□□□ -1.4
VPS8-219ENST00000469479 PPP2R5EQ16537 467 aa6.32□□□□□ -1.4
VPS8-219ENST00000469479 ZNF394Q53GI3 561 aa6.32□□□□□ -1.4
VPS8-219ENST00000469479 LDLRAD1Q5T700 205 aa6.32□□□□□ -1.4
VPS8-219ENST00000469479 TBC1D9BQ66K14 1250 aa6.32□□□□□ -1.4
VPS8-219ENST00000469479 CLEC4GQ6UXB4 293 aa6.32□□□□□ -1.4
VPS8-219ENST00000469479 TMC5Q6UXY8 1006 aa6.32□□□□□ -1.4
VPS8-219ENST00000469479 NAF1Q96HR8 494 aaKnown RBP6.32□□□□□ -1.4
VPS8-219ENST00000469479 AJUBAQ96IF1 538 aa6.32□□□□□ -1.4
VPS8-219ENST00000469479 VPS33BQ9H267 617 aa6.32□□□□□ -1.4
VPS8-219ENST00000469479 METTL5Q9NRN9 209 aaKnown RBP6.32□□□□□ -1.4
VPS8-219ENST00000469479 PGAP2Q9UHJ9 254 aa6.32□□□□□ -1.4
VPS8-219ENST00000469479 WASF3Q9UPY6 502 aa6.32□□□□□ -1.4
VPS8-219ENST00000469479 COL11A2P13942 1736 aaPredicted RBP6.31□□□□□ -1.4
VPS8-219ENST00000469479 TRPM7Q96QT4 1865 aa6.31□□□□□ -1.4
VPS8-219ENST00000469479 SCN7AQ01118 1682 aa6.31□□□□□ -1.4
VPS8-219ENST00000469479 MRC1P22897 1456 aa6.31□□□□□ -1.4
VPS8-219ENST00000469479 TRAF5O00463 557 aa6.31□□□□□ -1.4
VPS8-219ENST00000469479 DGKIO75912 1065 aa6.31□□□□□ -1.4
VPS8-219ENST00000469479 CANXP27824 592 aaKnown RBP6.31□□□□□ -1.4
VPS8-219ENST00000469479 CASP7P55210 303 aa6.31□□□□□ -1.4
VPS8-219ENST00000469479 HUNKP57058 714 aa6.31□□□□□ -1.4
VPS8-219ENST00000469479 PTH1RQ03431 593 aa6.31□□□□□ -1.4
VPS8-219ENST00000469479 SMAD2Q15796 467 aaKnown RBP6.31□□□□□ -1.4
VPS8-219ENST00000469479 LSM12Q3MHD2 195 aaKnown RBP6.31□□□□□ -1.4
VPS8-219ENST00000469479 IGFL4Q6B9Z1 124 aa6.31□□□□□ -1.4
VPS8-219ENST00000469479 VHLLQ6RSH7 139 aa6.31□□□□□ -1.4
VPS8-219ENST00000469479 NBPF5PQ86XG9 351 aaPredicted RBP6.31□□□□□ -1.4
VPS8-219ENST00000469479 TTC5Q8N0Z6 440 aa6.31□□□□□ -1.4
VPS8-219ENST00000469479 SYNE4Q8N205 404 aa6.31□□□□□ -1.4
VPS8-219ENST00000469479 MRGPRX3Q96LB0 322 aa6.31□□□□□ -1.4
VPS8-219ENST00000469479 LRRC37BQ96QE4 947 aa6.31□□□□□ -1.4
VPS8-219ENST00000469479 SMOC1Q9H4F8 434 aa6.31□□□□□ -1.4
VPS8-219ENST00000469479 GPRC5DQ9NZD1 345 aa6.31□□□□□ -1.4
VPS8-219ENST00000469479 POLKQ9UBT6 870 aa6.31□□□□□ -1.4
VPS8-219ENST00000469479 PCDHGB7Q9Y5F8 929 aa6.31□□□□□ -1.4
VPS8-219ENST00000469479 BCORQ6W2J9 1755 aa6.31□□□□□ -1.4
VPS8-219ENST00000469479 ANKRD31Q8N7Z5 1873 aa6.3□□□□□ -1.4
VPS8-219ENST00000469479 MEFVO15553 781 aaPredicted RBP6.3□□□□□ -1.4
VPS8-219ENST00000469479 HOXC12P31275 282 aa6.3□□□□□ -1.4
VPS8-219ENST00000469479 EPS15P42566 896 aa6.3□□□□□ -1.4
VPS8-219ENST00000469479 FXR1P51114 621 aaKnown RBP eCLIP6.3□□□□□ -1.4
VPS8-219ENST00000469479 LSAMPQ13449 338 aa6.3□□□□□ -1.4
VPS8-219ENST00000469479 AGBL4Q5VU57 503 aa6.3□□□□□ -1.4
VPS8-219ENST00000469479 RGMBQ6NW40 437 aa6.3□□□□□ -1.4
VPS8-219ENST00000469479 CCDC103Q8IW40 242 aa6.3□□□□□ -1.4
VPS8-219ENST00000469479 TRIM48Q8IWZ4 208 aa6.3□□□□□ -1.4
VPS8-219ENST00000469479 NIM1KQ8IY84 436 aa6.3□□□□□ -1.4
VPS8-219ENST00000469479 C2orf69Q8N8R5 385 aa6.3□□□□□ -1.4
VPS8-219ENST00000469479 TMX4Q9H1E5 349 aaPredicted RBP6.3□□□□□ -1.4
VPS8-219ENST00000469479 EPB41L1Q9H4G0 881 aa6.3□□□□□ -1.4
VPS8-219ENST00000469479 DLL4Q9NR61 685 aa6.3□□□□□ -1.4
VPS8-219ENST00000469479 MYOTQ9UBF9 498 aa6.3□□□□□ -1.4
VPS8-219ENST00000469479 EFR3BQ9Y2G0 817 aa6.3□□□□□ -1.4
VPS8-219ENST00000469479 SLX4Q8IY92 1834 aa6.29□□□□□ -1.4
VPS8-219ENST00000469479 CASP8AP2Q9UKL3 1982 aa6.29□□□□□ -1.4
VPS8-219ENST00000469479 A0A087X1B8 175 aa6.29□□□□□ -1.4
VPS8-219ENST00000469479 PPFIA2O75334 1257 aa6.29□□□□□ -1.4
VPS8-219ENST00000469479 NANOS3P60323 173 aaKnown RBP6.29□□□□□ -1.4
VPS8-219ENST00000469479 FANCCQ00597 558 aa6.29□□□□□ -1.4
VPS8-219ENST00000469479 CYP4F3Q08477 520 aa6.29□□□□□ -1.4
VPS8-219ENST00000469479 TESK1Q15569 626 aa6.29□□□□□ -1.4
VPS8-219ENST00000469479 ACBD5Q5T8D3 534 aaPredicted RBP6.29□□□□□ -1.4
VPS8-219ENST00000469479 VASNQ6EMK4 673 aa6.29□□□□□ -1.4
VPS8-219ENST00000469479 FBXO46Q6PJ61 603 aaPredicted RBP6.29□□□□□ -1.4
VPS8-219ENST00000469479 TAX1BP1Q86VP1 789 aa6.29□□□□□ -1.4
VPS8-219ENST00000469479 REXO1L1PQ8IX06 675 aa6.29□□□□□ -1.4
VPS8-219ENST00000469479 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.29□□□□□ -1.4
VPS8-219ENST00000469479 EXTL1Q92935 676 aa6.29□□□□□ -1.4
VPS8-219ENST00000469479 ZNF408Q9H9D4 720 aa6.29□□□□□ -1.4
VPS8-219ENST00000469479 RNF186Q9NXI6 227 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms