RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 CALCRLQ16602 461 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 SBK1Q52WX2 424 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 SYDE2Q5VT97 1194 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 RRAGBQ5VZM2 374 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 ATG4CQ96DT6 458 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 TMEM60Q9H2L4 133 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 CARD8Q9Y2G2 431 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 KLRG2A4D1S0 409 aaPredicted RBP10.7□□□□□ -0.7
NUP50-214ENST00000469163 HIP1RO75146 1068 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 HSPA8P11142 646 aaKnown RBP10.7□□□□□ -0.7
NUP50-214ENST00000469163 PHEXP78562 749 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 PTK7Q13308 1070 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 TUBB2AQ13885 445 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 MAP7Q14244 749 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 NELFCDQ8IXH7 590 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 SNX29Q8TEQ0 813 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 DPF2Q92785 391 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 HAUS1Q96CS2 278 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 CCDC17Q96LX7 622 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 TUBB2BQ9BVA1 445 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 PLAAQ9Y263 795 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 SSX2IPQ9Y2D8 614 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 CNTNAP5Q8WYK1 1306 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 A0A0U1RQJ8 604 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 TARSL2A2RTX5 802 aaKnown RBP10.69□□□□□ -0.7
NUP50-214ENST00000469163 EPHX2P34913 555 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 MDH1P40925 334 aaKnown RBP10.69□□□□□ -0.7
NUP50-214ENST00000469163 USP11P51784 963 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 ZNF543Q08ER8 600 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 LRRC41Q15345 812 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 SLC2A7Q6PXP3 512 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 NEK10Q6ZWH5 1172 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 DAAM2Q86T65 1068 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 SLC10A4Q96EP9 437 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 CCDC68Q9H2F9 335 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 LRWD1Q9UFC0 647 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 GGA2Q9UJY4 613 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 PRR12Q9ULL5 1215 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 MYO5AQ9Y4I1 1855 aaKnown RBP10.69□□□□□ -0.7
NUP50-214ENST00000469163 N4BP2Q86UW6 1770 aaPredicted RBP10.69□□□□□ -0.7
NUP50-214ENST00000469163 ABCB11O95342 1321 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 PRPF3O43395 683 aaKnown RBP10.69□□□□□ -0.7
NUP50-214ENST00000469163 KIF11P52732 1056 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 ATP11AP98196 1134 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 PFKFB3Q16875 520 aaPredicted RBP10.69□□□□□ -0.7
NUP50-214ENST00000469163 SNRNP48Q6IEG0 339 aaKnown RBP10.69□□□□□ -0.7
NUP50-214ENST00000469163 PIGOQ8TEQ8 1089 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 FBF1Q8TES7 1133 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 AMNQ9BXJ7 453 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 PPME1Q9Y570 386 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 NHSQ6T4R5 1651 aa10.69□□□□□ -0.7
NUP50-214ENST00000469163 TRIM64CA6NLI5 447 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 STX10O60499 249 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 ETS2P15036 469 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 CCT6AP40227 531 aaKnown RBP10.68□□□□□ -0.7
NUP50-214ENST00000469163 HIRAP54198 1017 aaPredicted RBP10.68□□□□□ -0.7
NUP50-214ENST00000469163 PMS2P54278 862 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 INAQ16352 499 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 ALS2CLQ60I27 953 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 SCUBE1Q8IWY4 988 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 RSPH1Q8WYR4 309 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 INIPQ9NRY2 104 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.68□□□□□ -0.7
NUP50-214ENST00000469163 HEY1Q9Y5J3 304 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 GMNCA6NCL1 334 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 CSPG5O95196 566 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 CELF2O95319 508 aaKnown RBP10.68□□□□□ -0.7
NUP50-214ENST00000469163 CYP2C8P10632 490 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 ENDOUP21128 410 aaKnown RBP10.68□□□□□ -0.7
NUP50-214ENST00000469163 LACTBP83111 547 aaPredicted RBP10.68□□□□□ -0.7
NUP50-214ENST00000469163 ITIH3Q06033 890 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 LBRQ14739 615 aaKnown RBP10.68□□□□□ -0.7
NUP50-214ENST00000469163 TMEM266Q2M3C6 531 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 KIAA1755Q5JYT7 1200 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 DCAF15Q66K64 600 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 RDH13Q8NBN7 331 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 RMND1Q9NWS8 449 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 GPRC5DQ9NZD1 345 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 DDX25Q9UHL0 483 aaKnown RBP10.68□□□□□ -0.7
NUP50-214ENST00000469163 PCDHA4Q9UN74 947 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 POTEFA5A3E0 1075 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 VDRP11473 427 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 RIPK1Q13546 671 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 GRM4Q14833 912 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 QPCTQ16769 361 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 SPDYE2Q495Y8 402 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 EMC10Q5UCC4 262 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 NEK8Q86SG6 692 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 CCT7Q99832 543 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 CEP290O15078 2479 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 RFX7Q2KHR2 1363 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 NUP188Q5SRE5 1749 aa10.68□□□□□ -0.7
NUP50-214ENST00000469163 GAKO14976 1311 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 SLX4Q8IY92 1834 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 SOWAHDA6NJG2 315 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 ZBTB5O15062 677 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 CAP2P40123 477 aa10.67□□□□□ -0.7
NUP50-214ENST00000469163 TOB1P50616 345 aaPredicted RBP10.67□□□□□ -0.7
NUP50-214ENST00000469163 MRPS25P82663 173 aaKnown RBP10.67□□□□□ -0.7
NUP50-214ENST00000469163 HTRA3P83110 453 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms