RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 INO80BQ9C086 356 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-216ENST00000468949 NAT10Q9H0A0 1025 aaKnown RBP8.95□□□□□ -0.98
HDAC6-216ENST00000468949 SLC39A2Q9NP94 309 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 PDLIM7Q9NR12 457 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 OLFML3Q9NRN5 406 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 ANO10Q9NW15 660 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 WDR70Q9NW82 654 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 MAN1B1Q9UKM7 699 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 EXOC7Q9UPT5 735 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 SCN10AQ9Y5Y9 1956 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 IGKV6-21A0A0C4DH24 114 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 FRMD3A2A2Y4 597 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 INO80B-WBP1J3KQ70 363 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 PSMA7O14818 248 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 SLC16A4O15374 487 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 CAND2O75155 1236 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 RHOBTB3O94955 611 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 MAPTP10636 758 aaKnown RBP8.94□□□□□ -0.98
HDAC6-216ENST00000468949 SFPQP23246 707 aaKnown RBP eCLIP8.94□□□□□ -0.98
HDAC6-216ENST00000468949 GLRA2P23416 452 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 HOXC8P31273 242 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 BMP8BP34820 402 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 ARL2P36404 184 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 MATR3P43243 847 aaKnown RBP eCLIP8.94□□□□□ -0.98
HDAC6-216ENST00000468949 NPTX2P47972 431 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 ZNF131P52739 623 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 EFNA5P52803 228 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 NLRP11P59045 1033 aaKnown RBP8.94□□□□□ -0.98
HDAC6-216ENST00000468949 MRPS6P82932 125 aaKnown RBP8.94□□□□□ -0.98
HDAC6-216ENST00000468949 MDM2Q00987 491 aaPredicted RBP8.94□□□□□ -0.98
HDAC6-216ENST00000468949 TMEM62Q0P6H9 643 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 MAPK7Q13164 816 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 CAPSQ13938 189 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 KIZQ2M2Z5 673 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 MARCH8Q5T0T0 291 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 ZNF658Q5TYW1 1059 aaPredicted RBP8.94□□□□□ -0.98
HDAC6-216ENST00000468949 ISM2Q6H9L7 571 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 SERINC5Q86VE9 423 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 ASAP3Q8TDY4 903 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 SPIRE2Q8WWL2 714 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 HVCN1Q96D96 273 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 CEP89Q96ST8 783 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 TSG101Q99816 390 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 TRPV6Q9H1D0 765 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 POLD4Q9HCU8 107 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 PRDM5Q9NQX1 630 aaPredicted RBP8.94□□□□□ -0.98
HDAC6-216ENST00000468949 TRPV2Q9Y5S1 764 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 GRIN2DO15399 1336 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 UBE4BO95155 1302 aa8.94□□□□□ -0.98
HDAC6-216ENST00000468949 DENND3A2RUS2 1198 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 EIF3DO15371 548 aaKnown RBP eCLIP8.93□□□□□ -0.98
HDAC6-216ENST00000468949 KLRC4O43908 158 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 SLC34A2O95436 690 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 CLTBP09497 229 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 GPC3P51654 580 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 NCKAP1LP55160 1127 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 NLRP12P59046 1061 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 ADAM17P78536 824 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 TLE2Q04725 743 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 TYRO3Q06418 890 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 DRP2Q13474 957 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 MAPK6Q16659 721 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 TPD52L1Q16890 204 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-216ENST00000468949 NT5DC1Q5TFE4 455 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 ASTLQ6HA08 431 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-216ENST00000468949 KLHL10Q6JEL2 608 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 HS2ST1Q7LGA3 356 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 ANKRD33Q7Z3H0 272 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 HAUS6Q7Z4H7 955 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 APBB1IPQ7Z5R6 666 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-216ENST00000468949 FAM126BQ8IXS8 530 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 KIAA0319LQ8IZA0 1049 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 MYOCDQ8IZQ8 938 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 DAW1Q8N136 415 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 MLKLQ8NB16 471 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 SLC43A3Q8NBI5 491 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 ZNF668Q96K58 619 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-216ENST00000468949 ACCSQ96QU6 501 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 OSMRQ99650 979 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 KIFC3Q9BVG8 833 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 UBE2OQ9C0C9 1292 aaKnown RBP8.93□□□□□ -0.98
HDAC6-216ENST00000468949 HIPK3Q9H422 1215 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 TMEM206Q9H813 350 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 TMEM39AQ9NV64 488 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 GDAQ9Y2T3 454 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 CDY2AQ9Y6F7 541 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 TANC1Q9C0D5 1861 aa8.93□□□□□ -0.98
HDAC6-216ENST00000468949 A0A087WZ62 844 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 BICDL2A1A5D9 508 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 K7ERI5 159 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 HNRNPDLO14979 420 aaKnown RBP8.92□□□□□ -0.98
HDAC6-216ENST00000468949 PRKCBP05771 671 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 MYBP10242 640 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 NMT1P30419 496 aaKnown RBP8.92□□□□□ -0.98
HDAC6-216ENST00000468949 SARSP49591 514 aaKnown RBP8.92□□□□□ -0.98
HDAC6-216ENST00000468949 LIG4P49917 911 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 FXR1P51114 621 aaKnown RBP eCLIP8.92□□□□□ -0.98
HDAC6-216ENST00000468949 CRYBB1P53674 252 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-216ENST00000468949 TPM4P67936 248 aa8.92□□□□□ -0.98
HDAC6-216ENST00000468949 PAK2Q13177 524 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms