RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 HELQQ8TDG4 1101 aa13.43□□□□□ -0.26
VPS26A-204ENST00000467852 AMNQ9BXJ7 453 aa13.43□□□□□ -0.26
VPS26A-204ENST00000467852 VAT1LQ9HCJ6 419 aa13.43□□□□□ -0.26
VPS26A-204ENST00000467852 MRPL17Q9NRX2 175 aaKnown RBP13.43□□□□□ -0.26
VPS26A-204ENST00000467852 RTEL1Q9NZ71 1219 aa13.43□□□□□ -0.26
VPS26A-204ENST00000467852 MSRB2Q9Y3D2 182 aa13.43□□□□□ -0.26
VPS26A-204ENST00000467852 F5P12259 2224 aa13.42□□□□□ -0.26
VPS26A-204ENST00000467852 OPLAHO14841 1288 aa13.42□□□□□ -0.26
VPS26A-204ENST00000467852 RFPL2O75678 378 aa13.42□□□□□ -0.26
VPS26A-204ENST00000467852 SSBP05455 408 aaKnown RBP eCLIP13.42□□□□□ -0.26
VPS26A-204ENST00000467852 CEACAM1P13688 526 aa13.42□□□□□ -0.26
VPS26A-204ENST00000467852 MRPS9P82933 396 aaKnown RBP13.42□□□□□ -0.26
VPS26A-204ENST00000467852 DSC3Q14574 896 aa13.42□□□□□ -0.26
VPS26A-204ENST00000467852 CLLU1OSQ5K130 101 aa13.42□□□□□ -0.26
VPS26A-204ENST00000467852 SH3PXD2AQ5TCZ1 1133 aa13.42□□□□□ -0.26
VPS26A-204ENST00000467852 DAB2IPQ5VWQ8 1189 aa13.42□□□□□ -0.26
VPS26A-204ENST00000467852 LONP2Q86WA8 852 aa13.42□□□□□ -0.26
VPS26A-204ENST00000467852 TMEM173Q86WV6 379 aaPredicted RBP13.42□□□□□ -0.26
VPS26A-204ENST00000467852 ECHDC2Q86YB7 292 aa13.42□□□□□ -0.26
VPS26A-204ENST00000467852 TMEM40Q8WWA1 233 aa13.42□□□□□ -0.26
VPS26A-204ENST00000467852 LOXL4Q96JB6 756 aa13.42□□□□□ -0.26
VPS26A-204ENST00000467852 CDHR5Q9HBB8 845 aa13.42□□□□□ -0.26
VPS26A-204ENST00000467852 TICRRQ7Z2Z1 1910 aa13.42□□□□□ -0.26
VPS26A-204ENST00000467852 LAMA1P25391 3075 aa13.42□□□□□ -0.26
VPS26A-204ENST00000467852 DOCK6Q96HP0 2047 aa13.42□□□□□ -0.26
VPS26A-204ENST00000467852 GSTTP1A0A1W2PQM5 241 aa13.41□□□□□ -0.26
VPS26A-204ENST00000467852 GCOM1H8Y6P7 765 aaPredicted RBP13.41□□□□□ -0.26
VPS26A-204ENST00000467852 GLUD1P00367 558 aa13.41□□□□□ -0.26
VPS26A-204ENST00000467852 ADH1AP07327 375 aa13.41□□□□□ -0.26
VPS26A-204ENST00000467852 POLR2MP0CAP2 368 aa13.41□□□□□ -0.26
VPS26A-204ENST00000467852 TROAPQ12815 778 aa13.41□□□□□ -0.26
VPS26A-204ENST00000467852 FAM228AQ86W67 206 aa13.41□□□□□ -0.26
VPS26A-204ENST00000467852 TRAPPC12Q8WVT3 735 aa13.41□□□□□ -0.26
VPS26A-204ENST00000467852 ZNF707Q96C28 371 aaPredicted RBP13.41□□□□□ -0.26
VPS26A-204ENST00000467852 SCUBE2Q9NQ36 999 aa13.41□□□□□ -0.26
VPS26A-204ENST00000467852 NDRG2Q9UN36 371 aaKnown RBP13.41□□□□□ -0.26
VPS26A-204ENST00000467852 MAN2B1O00754 1011 aa13.4□□□□□ -0.26
VPS26A-204ENST00000467852 MYBP10242 640 aa13.4□□□□□ -0.26
VPS26A-204ENST00000467852 FSHRP23945 695 aa13.4□□□□□ -0.26
VPS26A-204ENST00000467852 PLCB4Q15147 1175 aa13.4□□□□□ -0.26
VPS26A-204ENST00000467852 MTHFD1LQ6UB35 978 aa13.4□□□□□ -0.26
VPS26A-204ENST00000467852 HDAC7Q8WUI4 952 aa13.4□□□□□ -0.26
VPS26A-204ENST00000467852 HNRNPABQ99729 332 aaKnown RBP13.4□□□□□ -0.26
VPS26A-204ENST00000467852 PHF20Q9BVI0 1012 aa13.4□□□□□ -0.26
VPS26A-204ENST00000467852 NT5C3AQ9H0P0 336 aa13.4□□□□□ -0.26
VPS26A-204ENST00000467852 AZI2Q9H6S1 392 aa13.4□□□□□ -0.26
VPS26A-204ENST00000467852 JMJD4Q9H9V9 463 aa13.4□□□□□ -0.26
VPS26A-204ENST00000467852 ANAPC4Q9UJX5 808 aa13.4□□□□□ -0.26
VPS26A-204ENST00000467852 CDH7Q9ULB5 785 aa13.4□□□□□ -0.26
VPS26A-204ENST00000467852 SSX2IPQ9Y2D8 614 aa13.4□□□□□ -0.26
VPS26A-204ENST00000467852 SHROOM3Q8TF72 1996 aa13.4□□□□□ -0.27
VPS26A-204ENST00000467852 USP9XQ93008 2570 aaPredicted RBP13.39□□□□□ -0.27
VPS26A-204ENST00000467852 TENM4Q6N022 2769 aa13.39□□□□□ -0.27
VPS26A-204ENST00000467852 HYAL3O43820 417 aaPredicted RBP13.39□□□□□ -0.27
VPS26A-204ENST00000467852 LILRB3O75022 631 aa13.39□□□□□ -0.27
VPS26A-204ENST00000467852 RAB11FIP3O75154 756 aa13.39□□□□□ -0.27
VPS26A-204ENST00000467852 EPN2O95208 641 aa13.39□□□□□ -0.27
VPS26A-204ENST00000467852 GALTP07902 379 aa13.39□□□□□ -0.27
VPS26A-204ENST00000467852 FGRP09769 529 aa13.39□□□□□ -0.27
VPS26A-204ENST00000467852 CRYBB1P53674 252 aaPredicted RBP13.39□□□□□ -0.27
VPS26A-204ENST00000467852 SATB1Q01826 763 aa13.39□□□□□ -0.27
VPS26A-204ENST00000467852 LARP1BQ659C4 914 aaKnown RBP13.39□□□□□ -0.27
VPS26A-204ENST00000467852 KIAA1211LQ6NV74 962 aa13.39□□□□□ -0.27
VPS26A-204ENST00000467852 NLRX1Q86UT6 975 aa13.39□□□□□ -0.27
VPS26A-204ENST00000467852 RSPH1Q8WYR4 309 aa13.39□□□□□ -0.27
VPS26A-204ENST00000467852 MKNK1Q9BUB5 465 aa13.39□□□□□ -0.27
VPS26A-204ENST00000467852 ADAMTS10Q9H324 1103 aa13.39□□□□□ -0.27
VPS26A-204ENST00000467852 PLEKHA4Q9H4M7 779 aa13.39□□□□□ -0.27
VPS26A-204ENST00000467852 LMAN1LQ9HAT1 526 aa13.39□□□□□ -0.27
VPS26A-204ENST00000467852 HEBP1Q9NRV9 189 aa13.39□□□□□ -0.27
VPS26A-204ENST00000467852 FREM2Q5SZK8 3169 aa13.39□□□□□ -0.27
VPS26A-204ENST00000467852 ZNF316A6NFI3 1004 aaPredicted RBP13.38□□□□□ -0.27
VPS26A-204ENST00000467852 C4orf47A7E2U8 309 aa13.38□□□□□ -0.27
VPS26A-204ENST00000467852 CSRP1P21291 193 aaKnown RBP13.38□□□□□ -0.27
VPS26A-204ENST00000467852 AK2P54819 239 aa13.38□□□□□ -0.27
VPS26A-204ENST00000467852 ASPRV1Q53RT3 343 aa13.38□□□□□ -0.27
VPS26A-204ENST00000467852 ZKSCAN2Q63HK3 967 aa13.38□□□□□ -0.27
VPS26A-204ENST00000467852 HEATR6Q6AI08 1181 aaKnown RBP13.38□□□□□ -0.27
VPS26A-204ENST00000467852 ITPRIPQ8IWB1 547 aa13.38□□□□□ -0.27
VPS26A-204ENST00000467852 BCL7CQ8WUZ0 217 aaPredicted RBP13.38□□□□□ -0.27
VPS26A-204ENST00000467852 SEC62Q99442 399 aaKnown RBP13.38□□□□□ -0.27
VPS26A-204ENST00000467852 OSMRQ99650 979 aa13.38□□□□□ -0.27
VPS26A-204ENST00000467852 EDEM2Q9BV94 578 aa13.38□□□□□ -0.27
VPS26A-204ENST00000467852 PRKD2Q9BZL6 878 aa13.38□□□□□ -0.27
VPS26A-204ENST00000467852 VPS45Q9NRW7 570 aa13.38□□□□□ -0.27
VPS26A-204ENST00000467852 ZDHHC7Q9NXF8 308 aa13.38□□□□□ -0.27
VPS26A-204ENST00000467852 TRIM6-TRIM34B2RNG4 842 aa13.37□□□□□ -0.27
VPS26A-204ENST00000467852 C2CD2LO14523 706 aa13.37□□□□□ -0.27
VPS26A-204ENST00000467852 PAPLNO95428 1278 aa13.37□□□□□ -0.27
VPS26A-204ENST00000467852 KLRC1P26715 233 aa13.37□□□□□ -0.27
VPS26A-204ENST00000467852 RNASELQ05823 741 aaKnown RBP13.37□□□□□ -0.27
VPS26A-204ENST00000467852 KIZQ2M2Z5 673 aa13.37□□□□□ -0.27
VPS26A-204ENST00000467852 PLA2G2CQ5R387 149 aa13.37□□□□□ -0.27
VPS26A-204ENST00000467852 ZNF605Q86T29 641 aa13.37□□□□□ -0.27
VPS26A-204ENST00000467852 KIAA0319LQ8IZA0 1049 aa13.37□□□□□ -0.27
VPS26A-204ENST00000467852 KXD1Q9BQD3 176 aa13.37□□□□□ -0.27
VPS26A-204ENST00000467852 VN1R3Q9BXE9 311 aa13.37□□□□□ -0.27
VPS26A-204ENST00000467852 SMOC1Q9H4F8 434 aa13.37□□□□□ -0.27
VPS26A-204ENST00000467852 NRDE2Q9H7Z3 1164 aa13.37□□□□□ -0.27
VPS26A-204ENST00000467852 KLK13Q9UKR3 277 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms