RNA–Protein interactions for RNA: ENST00000467722.2

SPECC1-208, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 2

Gene SPECC1, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-208ENST00000467722 CHMP2AO43633 222 aa27.05■■□□□ 1.92
SPECC1-208ENST00000467722 PI15O43692 258 aa27.05■■□□□ 1.92
SPECC1-208ENST00000467722 B4GALT3O60512 393 aa27.05■■□□□ 1.92
SPECC1-208ENST00000467722 GAS7O60861 476 aa27.05■■□□□ 1.92
SPECC1-208ENST00000467722 SKIP12755 728 aa27.05■■□□□ 1.92
SPECC1-208ENST00000467722 SFPQP23246 707 aaKnown RBP eCLIP27.05■■□□□ 1.92
SPECC1-208ENST00000467722 TDGQ13569 410 aa27.05■■□□□ 1.92
SPECC1-208ENST00000467722 LONRF3Q496Y0 759 aa27.05■■□□□ 1.92
SPECC1-208ENST00000467722 OTOP3Q7RTS5 596 aa27.05■■□□□ 1.92
SPECC1-208ENST00000467722 CCDC105Q8IYK2 499 aa27.05■■□□□ 1.92
SPECC1-208ENST00000467722 YTHDC1Q96MU7 727 aaKnown RBP27.05■■□□□ 1.92
SPECC1-208ENST00000467722 FDXACB1Q9BRP7 624 aaPredicted RBP27.05■■□□□ 1.92
SPECC1-208ENST00000467722 NIFKQ9BYG3 293 aaKnown RBP27.05■■□□□ 1.92
SPECC1-208ENST00000467722 FAM105AQ9NUU6 356 aa27.05■■□□□ 1.92
SPECC1-208ENST00000467722 PIN4Q9Y237 131 aaKnown RBP27.05■■□□□ 1.92
SPECC1-208ENST00000467722 ZNF623O75123 536 aa27.04■■□□□ 1.92
SPECC1-208ENST00000467722 STBD1O95210 358 aa27.04■■□□□ 1.92
SPECC1-208ENST00000467722 SLC11A1P49279 550 aa27.04■■□□□ 1.92
SPECC1-208ENST00000467722 CLCN4P51793 760 aa27.04■■□□□ 1.92
SPECC1-208ENST00000467722 ADSSL1Q8N142 457 aa27.04■■□□□ 1.92
SPECC1-208ENST00000467722 SEPT9Q9UHD8 586 aaPredicted RBP27.04■■□□□ 1.92
SPECC1-208ENST00000467722 INPP5FQ9Y2H2 1132 aa27.04■■□□□ 1.92
SPECC1-208ENST00000467722 PRPF3O43395 683 aaKnown RBP27.03■■□□□ 1.92
SPECC1-208ENST00000467722 OFD1O75665 1012 aa27.03■■□□□ 1.92
SPECC1-208ENST00000467722 RAB27AP51159 221 aa27.03■■□□□ 1.92
SPECC1-208ENST00000467722 RNASELQ05823 741 aaKnown RBP27.03■■□□□ 1.92
SPECC1-208ENST00000467722 MTERF2Q49AM1 385 aa27.03■■□□□ 1.92
SPECC1-208ENST00000467722 LRCH2Q5VUJ6 765 aa27.03■■□□□ 1.92
SPECC1-208ENST00000467722 ZNF410Q86VK4 478 aa27.03■■□□□ 1.92
SPECC1-208ENST00000467722 BICD2Q8TD16 824 aa27.03■■□□□ 1.92
SPECC1-208ENST00000467722 CCDC136Q96JN2 1154 aa27.03■■□□□ 1.92
SPECC1-208ENST00000467722 TEKT3Q9BXF9 490 aa27.03■■□□□ 1.92
SPECC1-208ENST00000467722 KCNK12Q9HB15 430 aa27.03■■□□□ 1.92
SPECC1-208ENST00000467722 NAP1L2Q9ULW6 460 aaPredicted RBP27.03■■□□□ 1.92
SPECC1-208ENST00000467722 TMEM150BA6NC51 233 aa27.02■■□□□ 1.92
SPECC1-208ENST00000467722 KRT32Q14532 448 aa27.02■■□□□ 1.92
SPECC1-208ENST00000467722 XKR3Q5GH77 459 aa27.02■■□□□ 1.92
SPECC1-208ENST00000467722 C15orf39Q6ZRI6 1047 aa27.02■■□□□ 1.92
SPECC1-208ENST00000467722 RDM1Q8NG50 284 aa27.02■■□□□ 1.92
SPECC1-208ENST00000467722 GJA10Q969M2 543 aa27.02■■□□□ 1.92
SPECC1-208ENST00000467722 KLHL5Q96PQ7 755 aa27.02■■□□□ 1.92
SPECC1-208ENST00000467722 INO80BQ9C086 356 aaPredicted RBP27.02■■□□□ 1.92
SPECC1-208ENST00000467722 GBP3Q9H0R5 595 aa27.02■■□□□ 1.92
SPECC1-208ENST00000467722 STK39Q9UEW8 545 aa27.02■■□□□ 1.92
SPECC1-208ENST00000467722 LILRB3O75022 631 aa27.01■■□□□ 1.91
SPECC1-208ENST00000467722 PSMD10O75832 226 aa27.01■■□□□ 1.91
SPECC1-208ENST00000467722 CNPP09543 421 aaKnown RBP27.01■■□□□ 1.91
SPECC1-208ENST00000467722 DNM2P50570 870 aa27.01■■□□□ 1.91
SPECC1-208ENST00000467722 USP11P51784 963 aa27.01■■□□□ 1.91
SPECC1-208ENST00000467722 ANGPT1Q15389 498 aa27.01■■□□□ 1.91
SPECC1-208ENST00000467722 LETM2Q2VYF4 491 aa27.01■■□□□ 1.91
SPECC1-208ENST00000467722 B3GNT9Q6UX72 402 aa27.01■■□□□ 1.91
SPECC1-208ENST00000467722 ZNF280BQ86YH2 543 aa27.01■■□□□ 1.91
SPECC1-208ENST00000467722 RTP3Q9BQQ7 232 aa27.01■■□□□ 1.91
SPECC1-208ENST00000467722 EMILIN2Q9BXX0 1053 aa27.01■■□□□ 1.91
SPECC1-208ENST00000467722 FANCMQ8IYD8 2048 aa27■■□□□ 1.91
SPECC1-208ENST00000467722 MTCL1Q9Y4B5 1905 aaKnown RBP27■■□□□ 1.91
SPECC1-208ENST00000467722 HMGB1P09429 215 aaKnown RBP27■■□□□ 1.91
SPECC1-208ENST00000467722 ID4P47928 161 aa27■■□□□ 1.91
SPECC1-208ENST00000467722 SIX5Q8N196 739 aa27■■□□□ 1.91
SPECC1-208ENST00000467722 DTWD2Q8NBA8 298 aa27■■□□□ 1.91
SPECC1-208ENST00000467722 CCDC148Q8NFR7 591 aa27■■□□□ 1.91
SPECC1-208ENST00000467722 PHKBQ93100 1093 aa27■■□□□ 1.91
SPECC1-208ENST00000467722 SH2D3AQ9BRG2 576 aa27■■□□□ 1.91
SPECC1-208ENST00000467722 KLRC2P26717 231 aa26.99■■□□□ 1.91
SPECC1-208ENST00000467722 AGMOQ6ZNB7 445 aa26.99■■□□□ 1.91
SPECC1-208ENST00000467722 CATSPER4Q7RTX7 472 aa26.99■■□□□ 1.91
SPECC1-208ENST00000467722 MIER3Q7Z3K6 550 aa26.99■■□□□ 1.91
SPECC1-208ENST00000467722 RHPN2Q8IUC4 686 aa26.99■■□□□ 1.91
SPECC1-208ENST00000467722 IGSF9Q9P2J2 1179 aa26.99■■□□□ 1.91
SPECC1-208ENST00000467722 SUCLA2Q9P2R7 463 aaPredicted RBP26.99■■□□□ 1.91
SPECC1-208ENST00000467722 FBXL21Q9UKT6 434 aa26.99■■□□□ 1.91
SPECC1-208ENST00000467722 OTOGLQ3ZCN5 2332 aa26.98■■□□□ 1.91
SPECC1-208ENST00000467722 SPDYE4A6NLX3 237 aa26.98■■□□□ 1.91
SPECC1-208ENST00000467722 N4BP1O75113 896 aaKnown RBP26.98■■□□□ 1.91
SPECC1-208ENST00000467722 MAFO75444 373 aaPredicted RBP26.98■■□□□ 1.91
SPECC1-208ENST00000467722 DDHD2O94830 711 aa26.98■■□□□ 1.91
SPECC1-208ENST00000467722 NTRK3Q16288 839 aa26.98■■□□□ 1.91
SPECC1-208ENST00000467722 KSR1Q8IVT5 923 aa26.98■■□□□ 1.91
SPECC1-208ENST00000467722 CMASQ8NFW8 434 aaPredicted RBP26.98■■□□□ 1.91
SPECC1-208ENST00000467722 PGBD4Q96DM1 585 aa26.98■■□□□ 1.91
SPECC1-208ENST00000467722 AGPAT5Q9NUQ2 364 aa26.98■■□□□ 1.91
SPECC1-208ENST00000467722 PCDHB2Q9Y5E7 798 aa26.98■■□□□ 1.91
SPECC1-208ENST00000467722 TDRD15B5MCY1 1934 aaKnown RBP26.98■■□□□ 1.91
SPECC1-208ENST00000467722 CEP250Q9BV73 2442 aa26.97■■□□□ 1.91
SPECC1-208ENST00000467722 NARSO43776 548 aaKnown RBP26.97■■□□□ 1.91
SPECC1-208ENST00000467722 SSBP05455 408 aaKnown RBP eCLIP26.97■■□□□ 1.91
SPECC1-208ENST00000467722 CPA1P15085 419 aa26.97■■□□□ 1.91
SPECC1-208ENST00000467722 AFF1P51825 1210 aaKnown RBP26.97■■□□□ 1.91
SPECC1-208ENST00000467722 FGD1P98174 961 aa26.97■■□□□ 1.91
SPECC1-208ENST00000467722 Q4G0T1 1027 aa26.97■■□□□ 1.91
SPECC1-208ENST00000467722 BMP2KLQ5H9B9 411 aa26.97■■□□□ 1.91
SPECC1-208ENST00000467722 URGCPQ8TCY9 931 aa26.97■■□□□ 1.91
SPECC1-208ENST00000467722 BRF1Q92994 677 aa26.97■■□□□ 1.91
SPECC1-208ENST00000467722 NLRP4Q96MN2 994 aa26.97■■□□□ 1.91
SPECC1-208ENST00000467722 TMEM175Q9BSA9 504 aa26.97■■□□□ 1.91
SPECC1-208ENST00000467722 RNF26Q9BY78 433 aaPredicted RBP26.97■■□□□ 1.91
SPECC1-208ENST00000467722 IFT122Q9HBG6 1241 aa26.97■■□□□ 1.91
SPECC1-208ENST00000467722 MRPL17Q9NRX2 175 aaKnown RBP26.97■■□□□ 1.91
SPECC1-208ENST00000467722 VPS54Q9P1Q0 977 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms