RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 CWH43Q9H720 699 aa15.69■□□□□ 0.1
CCHCR1-211ENST00000467553 NGRNQ9NPE2 291 aaKnown RBP15.69■□□□□ 0.1
CCHCR1-211ENST00000467553 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
CCHCR1-211ENST00000467553 PPME1Q9Y570 386 aa15.69■□□□□ 0.1
CCHCR1-211ENST00000467553 PCDHB6Q9Y5E3 794 aa15.69■□□□□ 0.1
CCHCR1-211ENST00000467553 A0A087WWV3 80 aa15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 A0A0U1RQF3 1178 aa15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 FSCN2O14926 492 aa15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 MAFO75444 373 aaPredicted RBP15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 SKIP12755 728 aa15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 IBSPP21815 317 aaPredicted RBP15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 IRS1P35568 1242 aa15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 NRIP1P48552 1158 aa15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 GATMP50440 423 aa15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 PTGDRQ13258 359 aa15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 DRP2Q13474 957 aa15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 BMS1Q14692 1282 aaKnown RBP15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 HERC4Q5GLZ8 1057 aaPredicted RBP15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 TMEM184AQ6ZMB5 413 aa15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 ZNF410Q86VK4 478 aa15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 ECHDC2Q86YB7 292 aa15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 C4orf32Q8N8J7 132 aa15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 MRPS27Q92552 414 aaKnown RBP15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 CASD1Q96PB1 797 aa15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 CEP89Q96ST8 783 aa15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 HSD17B14Q9BPX1 270 aa15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 MRPL9Q9BYD2 267 aaKnown RBP15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 GCOM2Q9BZD3 368 aaPredicted RBP15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 BMP2KQ9NSY1 1161 aaPredicted RBP15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 CLEC1BQ9P126 229 aa15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 SUCLA2Q9P2R7 463 aaPredicted RBP15.68■□□□□ 0.1
CCHCR1-211ENST00000467553 IGKV6-21A0A0C4DH24 114 aa15.67■□□□□ 0.1
CCHCR1-211ENST00000467553 K7ELQ4 463 aaPredicted RBP15.67■□□□□ 0.1
CCHCR1-211ENST00000467553 LINC01565O15544 149 aa15.67■□□□□ 0.1
CCHCR1-211ENST00000467553 ATF7P17544 494 aaPredicted RBP15.67■□□□□ 0.1
CCHCR1-211ENST00000467553 GTF2F1P35269 517 aaKnown RBP eCLIP15.67■□□□□ 0.1
CCHCR1-211ENST00000467553 POLGP54098 1239 aaPredicted RBP15.67■□□□□ 0.1
CCHCR1-211ENST00000467553 DUSP6Q16828 381 aa15.67■□□□□ 0.1
CCHCR1-211ENST00000467553 ADGRD2Q7Z7M1 963 aa15.67■□□□□ 0.1
CCHCR1-211ENST00000467553 NLRP7Q8WX94 980 aa15.67■□□□□ 0.1
CCHCR1-211ENST00000467553 ZNF558Q96NG5 402 aa15.67■□□□□ 0.1
CCHCR1-211ENST00000467553 TRIOO75962 3097 aa15.66■□□□□ 0.1
CCHCR1-211ENST00000467553 VPS37CA5D8V6 355 aaPredicted RBP15.66■□□□□ 0.1
CCHCR1-211ENST00000467553 FAM86C2PA6NEL3 165 aa15.66■□□□□ 0.1
CCHCR1-211ENST00000467553 FGFR1P11362 822 aa15.66■□□□□ 0.1
CCHCR1-211ENST00000467553 SFPQP23246 707 aaKnown RBP eCLIP15.66■□□□□ 0.1
CCHCR1-211ENST00000467553 CLUL1Q15846 466 aa15.66■□□□□ 0.1
CCHCR1-211ENST00000467553 RILPL1Q5EBL4 403 aa15.66■□□□□ 0.1
CCHCR1-211ENST00000467553 KCNT2Q6UVM3 1135 aa15.66■□□□□ 0.1
CCHCR1-211ENST00000467553 RHPN2Q8IUC4 686 aa15.66■□□□□ 0.1
CCHCR1-211ENST00000467553 PIGOQ8TEQ8 1089 aa15.66■□□□□ 0.1
CCHCR1-211ENST00000467553 SLC7A3Q8WY07 619 aa15.66■□□□□ 0.1
CCHCR1-211ENST00000467553 CCDC43Q96MW1 224 aaKnown RBP15.66■□□□□ 0.1
CCHCR1-211ENST00000467553 STK39Q9UEW8 545 aa15.66■□□□□ 0.1
CCHCR1-211ENST00000467553 A0A087WZ62 844 aa15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 MED24O75448 989 aa15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 CSDE1O75534 798 aaKnown RBP15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 SPATA31C1P0DKV0 1188 aa15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 HOXB8P17481 243 aaPredicted RBP15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 PDCP20941 246 aa15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 HOXD11P31277 338 aaPredicted RBP15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 RFC5P40937 340 aa15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 CBX2Q14781 532 aaPredicted RBP15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 RBM23Q86U06 439 aaKnown RBP15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 ZNF598Q86UK7 904 aaKnown RBP15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 CATSPER3Q86XQ3 398 aa15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 RNF135Q8IUD6 432 aa15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 KSR1Q8IVT5 923 aa15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 ERMNQ8TAM6 284 aa15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 TMEM143Q96AN5 459 aa15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 MFSD14AQ96MC6 490 aa15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 FDXACB1Q9BRP7 624 aaPredicted RBP15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 PHF7Q9BWX1 381 aaPredicted RBP15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 TUFT1Q9NNX1 390 aa15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 ANKEF1Q9NU02 776 aa15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 RNF19AQ9NV58 838 aa15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 SPG21Q9NZD8 308 aa15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 LRWD1Q9UFC0 647 aa15.65■□□□□ 0.1
CCHCR1-211ENST00000467553 LOC730098B7Z3J9 87 aa15.64■□□□□ 0.09
CCHCR1-211ENST00000467553 GAS2O43903 313 aaKnown RBP15.64■□□□□ 0.09
CCHCR1-211ENST00000467553 LYPLA2O95372 231 aa15.64■□□□□ 0.09
CCHCR1-211ENST00000467553 GLP2RO95838 553 aa15.64■□□□□ 0.09
CCHCR1-211ENST00000467553 FGFR4P22455 802 aa15.64■□□□□ 0.09
CCHCR1-211ENST00000467553 ERVFC1P60507 584 aa15.64■□□□□ 0.09
CCHCR1-211ENST00000467553 DTHD1Q6ZMT9 781 aa15.64■□□□□ 0.09
CCHCR1-211ENST00000467553 LRRC55Q6ZSA7 311 aa15.64■□□□□ 0.09
CCHCR1-211ENST00000467553 FERMT3Q86UX7 667 aa15.64■□□□□ 0.09
CCHCR1-211ENST00000467553 PRPF31Q8WWY3 499 aaKnown RBP15.64■□□□□ 0.09
CCHCR1-211ENST00000467553 EDAQ92838 391 aa15.64■□□□□ 0.09
CCHCR1-211ENST00000467553 SNX21Q969T3 373 aa15.64■□□□□ 0.09
CCHCR1-211ENST00000467553 INTS4Q96HW7 963 aaKnown RBP15.64■□□□□ 0.09
CCHCR1-211ENST00000467553 POLR3CQ9BUI4 534 aaPredicted RBP15.64■□□□□ 0.09
CCHCR1-211ENST00000467553 DHX33Q9H6R0 707 aaKnown RBP15.64■□□□□ 0.09
CCHCR1-211ENST00000467553 ENTPD7Q9NQZ7 604 aa15.64■□□□□ 0.09
CCHCR1-211ENST00000467553 LAD1O00515 517 aa15.63■□□□□ 0.09
CCHCR1-211ENST00000467553 ZNF623O75123 536 aa15.63■□□□□ 0.09
CCHCR1-211ENST00000467553 CSPG5O95196 566 aa15.63■□□□□ 0.09
CCHCR1-211ENST00000467553 SRGAP2CP0DJJ0 459 aa15.63■□□□□ 0.09
CCHCR1-211ENST00000467553 XRCC6P12956 609 aaKnown RBP eCLIP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms