RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 GOLGA6BA6NDN3 693 aa5.43□□□□□ -1.54
SMC4-208ENST00000467468 PLIN1O60240 522 aa5.43□□□□□ -1.54
SMC4-208ENST00000467468 KRT18P05783 430 aaKnown RBP5.43□□□□□ -1.54
SMC4-208ENST00000467468 GOLGA6DP0CG33 693 aa5.43□□□□□ -1.54
SMC4-208ENST00000467468 ZSCAN20P17040 1043 aaPredicted RBP5.43□□□□□ -1.54
SMC4-208ENST00000467468 IARSP41252 1262 aaKnown RBP5.43□□□□□ -1.54
SMC4-208ENST00000467468 RGS3P49796 1198 aa5.43□□□□□ -1.54
SMC4-208ENST00000467468 STAT5BP51692 787 aa5.43□□□□□ -1.54
SMC4-208ENST00000467468 KRT85P78386 507 aa5.43□□□□□ -1.54
SMC4-208ENST00000467468 TMEM240Q5SV17 173 aa5.43□□□□□ -1.54
SMC4-208ENST00000467468 KLHDC10Q6PID8 442 aa5.43□□□□□ -1.54
SMC4-208ENST00000467468 LARP4Q71RC2 724 aaKnown RBP eCLIP5.43□□□□□ -1.544e-12■■■■□ 24.2
SMC4-208ENST00000467468 HDGFL2Q7Z4V5 671 aaPredicted RBP5.43□□□□□ -1.54
SMC4-208ENST00000467468 EXOC8Q8IYI6 725 aa5.43□□□□□ -1.54
SMC4-208ENST00000467468 JPH3Q8WXH2 748 aaPredicted RBP5.43□□□□□ -1.54
SMC4-208ENST00000467468 SLC5A5Q92911 643 aa5.43□□□□□ -1.54
SMC4-208ENST00000467468 GFM2Q969S9 779 aaKnown RBP5.43□□□□□ -1.54
SMC4-208ENST00000467468 FUBP3Q96I24 572 aaKnown RBP eCLIP5.43□□□□□ -1.54
SMC4-208ENST00000467468 C12orf65Q9H3J6 166 aaKnown RBP5.43□□□□□ -1.54
SMC4-208ENST00000467468 ARNT2Q9HBZ2 717 aa5.43□□□□□ -1.54
SMC4-208ENST00000467468 VTA1Q9NP79 307 aa5.43□□□□□ -1.54
SMC4-208ENST00000467468 GOLGA6AQ9NYA3 693 aa5.43□□□□□ -1.54
SMC4-208ENST00000467468 TCAF1Q9Y4C2 921 aa5.43□□□□□ -1.54
SMC4-208ENST00000467468 ST20-MTHFSA0A0A6YYL1 179 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 GPR42O15529 346 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 PRPF3O43395 683 aaKnown RBP5.42□□□□□ -1.54
SMC4-208ENST00000467468 TGM5O43548 720 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 APOL3O95236 402 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 MYL1P05976 194 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 U2AF1L5P0DN76 240 aaPredicted RBP5.42□□□□□ -1.54
SMC4-208ENST00000467468 MYBL2P10244 700 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 CR2P20023 1033 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 SELENOPP49908 381 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 ADAM17P78536 824 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 U2AF1Q01081 240 aaKnown RBP eCLIP5.42□□□□□ -1.54
SMC4-208ENST00000467468 ADCY2Q08462 1091 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 LRRC32Q14392 662 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 DDB1Q16531 1140 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 RNF151Q2KHN1 245 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 GFOD2Q3B7J2 385 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 GPR158Q5T848 1215 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 ESRP1Q6NXG1 681 aaKnown RBP5.42□□□□□ -1.54
SMC4-208ENST00000467468 BMP8AQ7Z5Y6 402 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 DVL3Q92997 716 aaPredicted RBP5.42□□□□□ -1.54
SMC4-208ENST00000467468 C8orf49Q96NF6 230 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 CDK5RAP1Q96SZ6 601 aaKnown RBP5.42□□□□□ -1.54
SMC4-208ENST00000467468 GPR20Q99678 358 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 SSBP3Q9BWW4 388 aaPredicted RBP5.42□□□□□ -1.54
SMC4-208ENST00000467468 SEMA4AQ9H3S1 761 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 DEF6Q9H4E7 631 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 POLR3BQ9NW08 1133 aaPredicted RBP5.42□□□□□ -1.54
SMC4-208ENST00000467468 H2AFY2Q9P0M6 372 aaPredicted RBP5.42□□□□□ -1.54
SMC4-208ENST00000467468 IP6K2Q9UHH9 426 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 NOB1Q9ULX3 412 aaKnown RBP5.42□□□□□ -1.54
SMC4-208ENST00000467468 LUC7L2Q9Y383 392 aaKnown RBP5.42□□□□□ -1.54
SMC4-208ENST00000467468 WASHC2AQ641Q2 1341 aa5.42□□□□□ -1.54
SMC4-208ENST00000467468 CDC14BO60729 498 aa5.41□□□□□ -1.54
SMC4-208ENST00000467468 EIF3JO75822 258 aaKnown RBP5.41□□□□□ -1.54
SMC4-208ENST00000467468 SNUPNO95149 360 aaKnown RBP5.41□□□□□ -1.54
SMC4-208ENST00000467468 MT-CO1P00395 513 aa5.41□□□□□ -1.54
SMC4-208ENST00000467468 RBP3P10745 1247 aa5.41□□□□□ -1.54
SMC4-208ENST00000467468 LSP1P33241 339 aa5.41□□□□□ -1.54
SMC4-208ENST00000467468 RPS19P39019 145 aaKnown RBP5.41□□□□□ -1.54
SMC4-208ENST00000467468 RECQLP46063 649 aaPredicted RBP5.41□□□□□ -1.54
SMC4-208ENST00000467468 PHC1P78364 1004 aa5.41□□□□□ -1.54
SMC4-208ENST00000467468 NOLC1Q14978 699 aaKnown RBP eCLIP5.41□□□□□ -1.544e-16■■■■■ 30.2
SMC4-208ENST00000467468 KIAA1841Q6NSI8 718 aa5.41□□□□□ -1.54
SMC4-208ENST00000467468 ESPNLQ6ZVH7 1005 aa5.41□□□□□ -1.54
SMC4-208ENST00000467468 TAX1BP1Q86VP1 789 aa5.41□□□□□ -1.54
SMC4-208ENST00000467468 C1orf162Q8NEQ5 155 aaPredicted RBP5.41□□□□□ -1.54
SMC4-208ENST00000467468 DNERQ8NFT8 737 aa5.41□□□□□ -1.54
SMC4-208ENST00000467468 RTF1Q92541 710 aaKnown RBP5.41□□□□□ -1.54
SMC4-208ENST00000467468 FERMT2Q96AC1 680 aa5.41□□□□□ -1.54
SMC4-208ENST00000467468 DYDC2Q96IM9 177 aa5.41□□□□□ -1.54
SMC4-208ENST00000467468 RPS6KC1Q96S38 1066 aa5.41□□□□□ -1.54
SMC4-208ENST00000467468 PTPN18Q99952 460 aa5.41□□□□□ -1.54
SMC4-208ENST00000467468 ZMAT4Q9H898 229 aa5.41□□□□□ -1.54
SMC4-208ENST00000467468 DENND2AQ9ULE3 1009 aa5.41□□□□□ -1.54
SMC4-208ENST00000467468 PNMA8BQ9ULN7 279 aaPredicted RBP5.41□□□□□ -1.54
SMC4-208ENST00000467468 PMS2P1A4D2B8 440 aa5.4□□□□□ -1.54
SMC4-208ENST00000467468 PATE3B3GLJ2 98 aa5.4□□□□□ -1.54
SMC4-208ENST00000467468 PRPF6O94906 941 aaKnown RBP5.4□□□□□ -1.54
SMC4-208ENST00000467468 CFBP00751 764 aa5.4□□□□□ -1.54
SMC4-208ENST00000467468 SMAD3P84022 425 aaKnown RBP5.4□□□□□ -1.54
SMC4-208ENST00000467468 BIRC2Q13490 618 aa5.4□□□□□ -1.54
SMC4-208ENST00000467468 HDAC1Q13547 482 aaPredicted RBP5.4□□□□□ -1.54
SMC4-208ENST00000467468 ICAM4Q14773 271 aa5.4□□□□□ -1.54
SMC4-208ENST00000467468 MYBPC3Q14896 1274 aa5.4□□□□□ -1.54
SMC4-208ENST00000467468 TERF2Q15554 542 aa5.4□□□□□ -1.54
SMC4-208ENST00000467468 BROXQ5VW32 411 aa5.4□□□□□ -1.54
SMC4-208ENST00000467468 DBX2Q6ZNG2 339 aa5.4□□□□□ -1.54
SMC4-208ENST00000467468 RASSF3Q86WH2 238 aa5.4□□□□□ -1.54
SMC4-208ENST00000467468 DGKHQ86XP1 1220 aa5.4□□□□□ -1.54
SMC4-208ENST00000467468 SMC5Q8IY18 1101 aa5.4□□□□□ -1.54
SMC4-208ENST00000467468 CPA6Q8N4T0 437 aa5.4□□□□□ -1.54
SMC4-208ENST00000467468 ZNF610Q8N9Z0 462 aa5.4□□□□□ -1.54
SMC4-208ENST00000467468 OR14K1Q8NGZ2 314 aa5.4□□□□□ -1.54
SMC4-208ENST00000467468 GCDHQ92947 438 aaPredicted RBP5.4□□□□□ -1.54
SMC4-208ENST00000467468 SLC7A6OSQ96CW6 309 aaPredicted RBP5.4□□□□□ -1.54
SMC4-208ENST00000467468 SLC39A13Q96H72 371 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms