RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 IGSF5Q9NSI5 407 aa4.92□□□□□ -1.62
CPS1-205ENST00000467353 KIAA1522Q9P206 1035 aaPredicted RBP4.92□□□□□ -1.62
CPS1-205ENST00000467353 SEPT9Q9UHD8 586 aaPredicted RBP4.92□□□□□ -1.62
CPS1-205ENST00000467353 DACH1Q9UI36 760 aa4.92□□□□□ -1.62
CPS1-205ENST00000467353 ZNF215Q9UL58 517 aaPredicted RBP4.92□□□□□ -1.62
CPS1-205ENST00000467353 RAB23Q9ULC3 237 aa4.92□□□□□ -1.62
CPS1-205ENST00000467353 ST3GAL5Q9UNP4 418 aa4.92□□□□□ -1.62
CPS1-205ENST00000467353 NOC2LQ9Y3T9 749 aaKnown RBP4.92□□□□□ -1.62
CPS1-205ENST00000467353 TRPV2Q9Y5S1 764 aa4.92□□□□□ -1.62
CPS1-205ENST00000467353 NUMBLQ9Y6R0 609 aa4.92□□□□□ -1.62
CPS1-205ENST00000467353 ABCB11O95342 1321 aa4.92□□□□□ -1.62
CPS1-205ENST00000467353 TTC3P53804 2025 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 CCDC195A0A1B0GUA6 201 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 DENND3A2RUS2 1198 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 RNF113AO15541 343 aaKnown RBP4.91□□□□□ -1.62
CPS1-205ENST00000467353 CT47B1P0C2W7 299 aaPredicted RBP4.91□□□□□ -1.62
CPS1-205ENST00000467353 SNHG28P0DPA3 235 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 MYBP10242 640 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 CTSAP10619 480 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 INSRRP14616 1297 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 GNAT2P19087 354 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 LIMK1P53667 647 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 BCAR1P56945 870 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 MRPS9P82933 396 aaKnown RBP4.91□□□□□ -1.62
CPS1-205ENST00000467353 KRT76Q01546 638 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 SP4Q02446 784 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 FOXC1Q12948 553 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 SRSF5Q13243 272 aaKnown RBP4.91□□□□□ -1.62
CPS1-205ENST00000467353 SIM2Q14190 667 aaPredicted RBP4.91□□□□□ -1.62
CPS1-205ENST00000467353 DSC3Q14574 896 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 MLF2Q15773 248 aaPredicted RBP4.91□□□□□ -1.62
CPS1-205ENST00000467353 CDC37Q16543 378 aaPredicted RBP4.91□□□□□ -1.62
CPS1-205ENST00000467353 QRICH1Q2TAL8 776 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 CLLU1OSQ5K130 101 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 ZBTB41Q5SVQ8 909 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 STPG1Q5TH74 334 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 PSAPL1Q6NUJ1 521 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 C15orf39Q6ZRI6 1047 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 PRR23BQ6ZRT6 265 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 PDZD3Q86UT5 571 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 TMEM173Q86WV6 379 aaPredicted RBP4.91□□□□□ -1.62
CPS1-205ENST00000467353 ADGRF4Q8IZF3 695 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 ADAM32Q8TC27 787 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 BCL7CQ8WUZ0 217 aaPredicted RBP4.91□□□□□ -1.62
CPS1-205ENST00000467353 TRAPPC12Q8WVT3 735 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 TMEM40Q8WWA1 233 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 APPBP2Q92624 585 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 KLHL5Q96PQ7 755 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 SEC62Q99442 399 aaKnown RBP4.91□□□□□ -1.62
CPS1-205ENST00000467353 FAM126AQ9BYI3 521 aaPredicted RBP4.91□□□□□ -1.62
CPS1-205ENST00000467353 ZBP1Q9H171 429 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 ELAC1Q9H777 363 aaKnown RBP4.91□□□□□ -1.62
CPS1-205ENST00000467353 C1orf112Q9NSG2 853 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 TMEM161AQ9NX61 479 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 RTEL1Q9NZ71 1219 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 MRPL11Q9Y3B7 192 aaKnown RBP4.91□□□□□ -1.62
CPS1-205ENST00000467353 PCDHA1Q9Y5I3 950 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 IRAK3Q9Y616 596 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 CCDC171Q6TFL3 1326 aa4.91□□□□□ -1.62
CPS1-205ENST00000467353 SMG1Q96Q15 3661 aaKnown RBP4.91□□□□□ -1.62
CPS1-205ENST00000467353 PLXNA4Q9HCM2 1894 aa4.9□□□□□ -1.62
CPS1-205ENST00000467353 TENM4Q6N022 2769 aa4.9□□□□□ -1.62
CPS1-205ENST00000467353 LOC400499M0QZD8 3231 aa4.9□□□□□ -1.62
CPS1-205ENST00000467353 COL4A3Q01955 1670 aa4.9□□□□□ -1.62
CPS1-205ENST00000467353 BAZ2AQ9UIF9 1905 aaKnown RBP4.9□□□□□ -1.62
CPS1-205ENST00000467353 GSTTP1A0A1W2PQM5 241 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 RRN3P2A6NIE6 340 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 SHISA7A6NL88 538 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 M0QZ92 97 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 FOXP2O15409 715 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 ACTN4O43707 911 aaKnown RBP4.9□□□□□ -1.63
CPS1-205ENST00000467353 ORC4O43929 436 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 PPP1R11O60927 126 aaPredicted RBP4.9□□□□□ -1.63
CPS1-205ENST00000467353 NR1I2O75469 434 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 RPS6KA5O75582 802 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 CNPP09543 421 aaKnown RBP4.9□□□□□ -1.63
CPS1-205ENST00000467353 FGRP09769 529 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 TARSP26639 723 aaKnown RBP4.9□□□□□ -1.63
CPS1-205ENST00000467353 KLRC2P26717 231 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 CCND2P30279 289 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 TCF7P36402 384 aaPredicted RBP4.9□□□□□ -1.63
CPS1-205ENST00000467353 RPS9P46781 194 aaKnown RBP4.9□□□□□ -1.63
CPS1-205ENST00000467353 ALDH7A1P49419 539 aaKnown RBP4.9□□□□□ -1.63
CPS1-205ENST00000467353 METAP2P50579 478 aaKnown RBP eCLIP4.9□□□□□ -1.63
CPS1-205ENST00000467353 CLCN4P51793 760 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 POLGP54098 1239 aaPredicted RBP4.9□□□□□ -1.63
CPS1-205ENST00000467353 NRLP54845 237 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 SEC13P55735 322 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 GHRHRQ02643 423 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 PRKCQQ04759 706 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 NEDD9Q14511 834 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 BMS1Q14692 1282 aaKnown RBP4.9□□□□□ -1.63
CPS1-205ENST00000467353 AASDHQ4L235 1098 aaPredicted RBP4.9□□□□□ -1.63
CPS1-205ENST00000467353 RNF20Q5VTR2 975 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 PDXDC2PQ6P474 469 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 PARM1Q6UWI2 310 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 MAMSTRQ6ZN01 415 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 DDX53Q86TM3 631 aaKnown RBP4.9□□□□□ -1.63
CPS1-205ENST00000467353 PPFIBP1Q86W92 1011 aa4.9□□□□□ -1.63
CPS1-205ENST00000467353 FCHSD1Q86WN1 690 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms