RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 EGFL8Q99944 293 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 LBHD1Q9BQE6 289 aaPredicted RBP9.29□□□□□ -0.92
HPS4-209ENST00000466781 KIAA1586Q9HCI6 787 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 GTSE1Q9NYZ3 720 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 SH2B2O14492 632 aaPredicted RBP9.29□□□□□ -0.92
HPS4-209ENST00000466781 NMT2O60551 498 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 E2F6O75461 281 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 ARL4DP49703 201 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 RWDD2BP57060 319 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 FOXO4P98177 505 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 RAD51Q06609 339 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 SLC39A14Q15043 492 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 PDIK1LQ8N165 341 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 MTBPQ96DY7 904 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 MTIF3Q9H2K0 278 aaKnown RBP9.29□□□□□ -0.92
HPS4-209ENST00000466781 CNOT10Q9H9A5 744 aaKnown RBP9.29□□□□□ -0.92
HPS4-209ENST00000466781 AFF4Q9UHB7 1163 aaKnown RBP9.29□□□□□ -0.92
HPS4-209ENST00000466781 PCDHA6Q9UN73 950 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 PCDHA8Q9Y5H6 950 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 UBE4BO95155 1302 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 ABCB11O95342 1321 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 NEDD4P46934 1319 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 USP42Q9H9J4 1324 aaKnown RBP9.29□□□□□ -0.92
HPS4-209ENST00000466781 CCDC151A5D8V7 595 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 KPNA7A9QM74 516 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 RPS12P25398 132 aaKnown RBP9.29□□□□□ -0.92
HPS4-209ENST00000466781 KCNJ6P48051 423 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 LLGL1Q15334 1064 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 ANO4Q32M45 955 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 ZNF34Q8IZ26 560 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 TBC1D19Q8N5T2 526 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 PPP1R13BQ96KQ4 1090 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 GCOM2Q9BZD3 368 aaPredicted RBP9.29□□□□□ -0.92
HPS4-209ENST00000466781 TRPV6Q9H1D0 765 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 NHEJ1Q9H9Q4 299 aaPredicted RBP9.29□□□□□ -0.92
HPS4-209ENST00000466781 CHCHD3Q9NX63 227 aaKnown RBP9.29□□□□□ -0.92
HPS4-209ENST00000466781 PCDHA13Q9Y5I0 950 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 DNAJC6O75061 913 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 GMPSP49915 693 aaPredicted RBP9.29□□□□□ -0.92
HPS4-209ENST00000466781 VCPP55072 806 aaKnown RBP9.29□□□□□ -0.92
HPS4-209ENST00000466781 ZBTB17Q13105 803 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 SNAPC2Q13487 334 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 GTF2H3Q13889 308 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 ACAD11Q709F0 780 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 PIP4K2CQ8TBX8 421 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 MRFAP1L1Q96HT8 127 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 TSSK1BQ9BXA7 367 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 NDFIP2Q9NV92 336 aa9.29□□□□□ -0.92
HPS4-209ENST00000466781 NBPF26B4DH59 902 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 PRDX5P30044 214 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 NT5C2P49902 561 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 NBPF10Q6P3W6 841 aaKnown RBP9.28□□□□□ -0.92
HPS4-209ENST00000466781 RHPN2Q8IUC4 686 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 NBPF15Q8N660 670 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 MCPH1Q8NEM0 835 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 RBM41Q96IZ5 413 aaKnown RBP9.28□□□□□ -0.92
HPS4-209ENST00000466781 CENPKQ9BS16 269 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 SLIT1O75093 1534 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 CYBBP04839 570 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 FCER1AP12319 257 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 MAP2K2P36507 400 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 CYP27A1Q02318 531 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 PTPN21Q16825 1174 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 C9orf131Q5VYM1 1079 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 TAS2R42Q7RTR8 314 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 FBXO18Q8NFZ0 1043 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 MAP4K1Q92918 833 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 RMDN3Q96TC7 470 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 SH3GLB2Q9NR46 395 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 CFAP69A5D8W1 941 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 USP17L15C9J2P7 530 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 USP17L13C9JLJ4 530 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 USP17L11C9JVI0 530 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 USP17L18D6R9N7 530 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 USP17L22D6RA61 530 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 USP17L17D6RBQ6 530 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 USP17L19D6RCP7 530 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 USP17L20D6RJB6 530 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 M0QYV0 167 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 SLCO1A2P46721 670 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 USP17L24Q0WX57 530 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 THEMIS2Q5TEJ8 643 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 TRIM62Q9BVG3 475 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 PLA2G12BQ9BX93 195 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 CASS4Q9NQ75 786 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 TSR3Q9UJK0 312 aaKnown RBP9.28□□□□□ -0.92
HPS4-209ENST00000466781 DOLKQ9UPQ8 538 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 DIS3Q9Y2L1 958 aaKnown RBP9.28□□□□□ -0.92
HPS4-209ENST00000466781 C3P01024 1663 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 UTYO14607 1347 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 CALB1P05937 261 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 DHX9Q08211 1270 aaKnown RBP9.28□□□□□ -0.92
HPS4-209ENST00000466781 FLOT2Q14254 428 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 PDXDC1Q6P996 788 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 MORC4Q8TE76 937 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 TRIM54Q9BYV2 358 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 CDC23Q9UJX2 597 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 STAP1Q9ULZ2 295 aa9.28□□□□□ -0.92
HPS4-209ENST00000466781 GTPBP10A4D1E9 387 aaKnown RBP9.28□□□□□ -0.92
HPS4-209ENST00000466781 KBTBD13C9JR72 458 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms