RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 CDK5RAP3Q96JB5 506 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 BHMT2Q9H2M3 363 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 OCEL1Q9H607 264 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 RGS18Q9NS28 235 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 C1orf112Q9NSG2 853 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 HCSTQ9UBK5 93 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 MTMR6Q9Y217 621 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 PPME1Q9Y570 386 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 CLIC4Q9Y696 253 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 TBKBP1A7MCY6 615 aa10.81□□□□□ -0.68
RTFDC1-205ENST00000466260 C9IYK1 514 aa10.81□□□□□ -0.68
RTFDC1-205ENST00000466260 INO80B-WBP1J3KQ70 363 aa10.81□□□□□ -0.68
RTFDC1-205ENST00000466260 GAS2O43903 313 aaKnown RBP10.81□□□□□ -0.68
RTFDC1-205ENST00000466260 DGKIO75912 1065 aa10.81□□□□□ -0.68
RTFDC1-205ENST00000466260 ERLIN2O94905 339 aa10.81□□□□□ -0.68
RTFDC1-205ENST00000466260 PRPHP41219 470 aa10.81□□□□□ -0.68
RTFDC1-205ENST00000466260 PHKA2P46019 1235 aa10.81□□□□□ -0.68
RTFDC1-205ENST00000466260 GRIN1Q05586 938 aa10.81□□□□□ -0.68
RTFDC1-205ENST00000466260 DSC3Q14574 896 aa10.81□□□□□ -0.68
RTFDC1-205ENST00000466260 SKIV2LQ15477 1246 aaKnown RBP10.81□□□□□ -0.68
RTFDC1-205ENST00000466260 PADI6Q6TGC4 694 aa10.81□□□□□ -0.68
RTFDC1-205ENST00000466260 SLC24A5Q71RS6 500 aa10.81□□□□□ -0.68
RTFDC1-205ENST00000466260 CPB2Q96IY4 423 aa10.81□□□□□ -0.68
RTFDC1-205ENST00000466260 INO80BQ9C086 356 aaPredicted RBP10.81□□□□□ -0.68
RTFDC1-205ENST00000466260 MINDY3Q9H8M7 445 aa10.81□□□□□ -0.68
RTFDC1-205ENST00000466260 IFT122Q9HBG6 1241 aa10.81□□□□□ -0.68
RTFDC1-205ENST00000466260 MRPL42Q9Y6G3 142 aaKnown RBP10.81□□□□□ -0.68
RTFDC1-205ENST00000466260 GLRA2P23416 452 aa10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 MARCKSP29966 332 aaPredicted RBP10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 ERVK-21P61565 698 aa10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 CDC42EP1Q00587 391 aa10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 GPM6BQ13491 265 aa10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 TFDP1Q14186 410 aa10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 PDIA5Q14554 519 aa10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 DHX8Q14562 1220 aaKnown RBP10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 TMEM132AQ24JP5 1023 aa10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 EPC2Q52LR7 807 aa10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 SPECC1Q5M775 1068 aa10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 KCNK18Q7Z418 384 aa10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 CABP7Q86V35 215 aa10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 CDR2LQ86X02 465 aaPredicted RBP10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 TMEM192Q8IY95 271 aa10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 ABI1Q8IZP0 508 aa10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 PDCD7Q8N8D1 485 aaKnown RBP10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 SLC39A7Q92504 469 aa10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 LPPQ93052 612 aa10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 ZNF689Q96CS4 500 aaPredicted RBP10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 RC3H2Q9HBD1 1191 aaKnown RBP10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 PRDM6Q9NQX0 595 aa10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 DBR1Q9UK59 544 aaKnown RBP10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 TCHHQ07283 1943 aa10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 PRRC2BQ5JSZ5 2229 aaKnown RBP10.8□□□□□ -0.68
RTFDC1-205ENST00000466260 ASAP2O43150 1006 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 XRCC6P12956 609 aaKnown RBP eCLIP10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 ARL2P36404 184 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 RAD51AP2Q09MP3 1159 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 MXD4Q14582 209 aaPredicted RBP10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 ARL6IP4Q66PJ3 421 aaKnown RBP10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 SRGAP1Q7Z6B7 1085 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 ECHDC2Q86YB7 292 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 CMTR2Q8IYT2 770 aaKnown RBP10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 ZNF710Q8N1W2 664 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 MCPH1Q8NEM0 835 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 HELQQ8TDG4 1101 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 BSNDQ8WZ55 320 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 SAMD11Q96NU1 681 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 PNMA5Q96PV4 448 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 USP28Q96RU2 1077 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 MMTAG2Q9BU76 263 aaKnown RBP10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 KIFC3Q9BVG8 833 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 APOL6Q9BWW8 343 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 AGPAT5Q9NUQ2 364 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 TMEM161AQ9NX61 479 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 DACT1Q9NYF0 836 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 CHMP5Q9NZZ3 219 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 DNM3Q9UQ16 869 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 INPP5FQ9Y2H2 1132 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 MTCH2Q9Y6C9 303 aa10.79□□□□□ -0.68
RTFDC1-205ENST00000466260 TRIP11Q15643 1979 aa10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 TCF20Q9UGU0 1960 aaKnown RBP10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 MEIS3P2A8K0S8 358 aa10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 B4GALT5O43286 388 aa10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 TSPAN1O60635 241 aa10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 LPXNO60711 386 aa10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 EYA4O95677 639 aa10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 BMP15O95972 392 aa10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 MUTP22033 750 aa10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 UBA7P41226 1012 aa10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 PTENP60484 403 aa10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 MBTD1Q05BQ5 628 aa10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 PKP1Q13835 747 aa10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 KARSQ15046 597 aaKnown RBP10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 ZBTB8OSQ8IWT0 167 aa10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 SLC17A8Q8NDX2 589 aa10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 DEPTORQ8TB45 409 aa10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 CALML4Q96GE6 196 aa10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 RUSC1Q9BVN2 902 aa10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 ZSCAN16Q9H4T2 348 aaPredicted RBP10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 ALG13Q9NP73 1137 aaKnown RBP10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 FAM105AQ9NUU6 356 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms