RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 INPP5FQ9Y2H2 1132 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 USP20Q9Y2K6 914 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 A0A0U1RQF3 1178 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 TSPAN1O60635 241 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 XRCC6P12956 609 aaKnown RBP eCLIP11.29□□□□□ -0.6
CD40-204ENST00000466205 CYP11B2P19099 503 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 MARCKSP29966 332 aaPredicted RBP11.29□□□□□ -0.6
CD40-204ENST00000466205 PRPHP41219 470 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 PTENP60484 403 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 FAM189BP81408 668 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 MBTD1Q05BQ5 628 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 RAD51AP2Q09MP3 1159 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 DHX8Q14562 1220 aaKnown RBP11.29□□□□□ -0.6
CD40-204ENST00000466205 FOXD4L6Q3SYB3 417 aaPredicted RBP11.29□□□□□ -0.6
CD40-204ENST00000466205 SPECC1Q5M775 1068 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 UBXN11Q5T124 520 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 FOXD4L3Q6VB84 417 aaPredicted RBP11.29□□□□□ -0.6
CD40-204ENST00000466205 LRRC55Q6ZSA7 311 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 CABP7Q86V35 215 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 CLP1Q92989 425 aaKnown RBP11.29□□□□□ -0.6
CD40-204ENST00000466205 SNX21Q969T3 373 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 INTS4Q96HW7 963 aaKnown RBP11.29□□□□□ -0.6
CD40-204ENST00000466205 CDK5RAP3Q96JB5 506 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 PNMA5Q96PV4 448 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 C11orf84Q9BUA3 381 aaPredicted RBP11.29□□□□□ -0.6
CD40-204ENST00000466205 APOL6Q9BWW8 343 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 EIF2AQ9BY44 585 aaKnown RBP11.29□□□□□ -0.6
CD40-204ENST00000466205 CWH43Q9H720 699 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 CHST12Q9NRB3 414 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 THEGQ9P2T0 379 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 PCDHGC5Q9Y5F6 944 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 RALGAPA2Q2PPJ7 1873 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 CHD9Q3L8U1 2897 aa11.29□□□□□ -0.6
CD40-204ENST00000466205 FNDC1Q4ZHG4 1894 aaPredicted RBP11.28□□□□□ -0.6
CD40-204ENST00000466205 NT5C1B-RDH14C9J2C7 533 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 C5orf67F2Z3F1 127 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 STX6O43752 255 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 ITGB1P05556 798 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 POU3F3P20264 500 aaPredicted RBP11.28□□□□□ -0.6
CD40-204ENST00000466205 DNAJB1P25685 340 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 HOXA11P31270 313 aaPredicted RBP11.28□□□□□ -0.6
CD40-204ENST00000466205 IRS1P35568 1242 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 CACNB1Q02641 598 aaPredicted RBP11.28□□□□□ -0.6
CD40-204ENST00000466205 PTPROQ16827 1216 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 TMEM132AQ24JP5 1023 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 TCEAL5Q5H9L2 206 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 ZNF598Q86UK7 904 aaKnown RBP11.28□□□□□ -0.6
CD40-204ENST00000466205 THNSL1Q8IYQ7 743 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 COLGALT1Q8NBJ5 622 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 MCPH1Q8NEM0 835 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 RASSF8Q8NHQ8 419 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 POF1BQ8WVV4 589 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 MRPL38Q96DV4 380 aaKnown RBP11.28□□□□□ -0.6
CD40-204ENST00000466205 RUSC1Q9BVN2 902 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 TMEM117Q9H0C3 514 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 GBP3Q9H0R5 595 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 RNF216Q9NWF9 866 aaPredicted RBP11.28□□□□□ -0.6
CD40-204ENST00000466205 PLAGL2Q9UPG8 496 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 DNM3Q9UQ16 869 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 RWDD3Q9Y3V2 267 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 HES2Q9Y543 173 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 PCDHB2Q9Y5E7 798 aa11.28□□□□□ -0.6
CD40-204ENST00000466205 NPHP3-ACAD11A0A0J9YXS1 232 aa11.27□□□□□ -0.61
CD40-204ENST00000466205 TTLL13PA6NNM8 815 aa11.27□□□□□ -0.61
CD40-204ENST00000466205 SFI1A8K8P3 1242 aa11.27□□□□□ -0.61
CD40-204ENST00000466205 HOXA2O43364 376 aa11.27□□□□□ -0.61
CD40-204ENST00000466205 HIP1RO75146 1068 aa11.27□□□□□ -0.61
CD40-204ENST00000466205 EYA4O95677 639 aa11.27□□□□□ -0.61
CD40-204ENST00000466205 RB1P06400 928 aa11.27□□□□□ -0.61
CD40-204ENST00000466205 ARF4P18085 180 aaPredicted RBP11.27□□□□□ -0.61
CD40-204ENST00000466205 MUTP22033 750 aa11.27□□□□□ -0.61
CD40-204ENST00000466205 AFF1P51825 1210 aaKnown RBP11.27□□□□□ -0.61
CD40-204ENST00000466205 KARSQ15046 597 aaKnown RBP11.27□□□□□ -0.61
CD40-204ENST00000466205 AMHR2Q16671 573 aa11.27□□□□□ -0.61
CD40-204ENST00000466205 ZBTB8OSQ8IWT0 167 aa11.27□□□□□ -0.61
CD40-204ENST00000466205 LRRC43Q8N309 656 aa11.27□□□□□ -0.61
CD40-204ENST00000466205 DEPTORQ8TB45 409 aa11.27□□□□□ -0.61
CD40-204ENST00000466205 RNF39Q9H2S5 420 aa11.27□□□□□ -0.61
CD40-204ENST00000466205 IGFLR1Q9H665 355 aa11.27□□□□□ -0.61
CD40-204ENST00000466205 PCDHB12Q9Y5F1 795 aa11.27□□□□□ -0.61
CD40-204ENST00000466205 STK24Q9Y6E0 443 aa11.27□□□□□ -0.61
CD40-204ENST00000466205 CHD7Q9P2D1 2997 aa11.27□□□□□ -0.61
CD40-204ENST00000466205 UNC80Q8N2C7 3258 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 PLXNA4Q9HCM2 1894 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 CCDC169A6NNP5 214 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 DLL1O00548 723 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 ZC3H11AO75152 810 aaKnown RBP eCLIP11.26□□□□□ -0.61
CD40-204ENST00000466205 OFD1O75665 1012 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 FGF18O76093 207 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 NPTXRO95502 500 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 EOMESO95936 686 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 POMCP01189 267 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 EDN1P05305 212 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 LAG3P18627 525 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 AKAP5P24588 427 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 CA8P35219 290 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 GTF2F1P35269 517 aaKnown RBP eCLIP11.26□□□□□ -0.61
CD40-204ENST00000466205 UBA7P41226 1012 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 KCNQ1P51787 676 aa11.26□□□□□ -0.61
CD40-204ENST00000466205 PEX3P56589 373 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms