RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 SLC39A2Q9NP94 309 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 KMT5AQ9NQR1 393 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 NOD1Q9Y239 953 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 ATP11BQ9Y2G3 1177 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 TRPV2Q9Y5S1 764 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 UBE4BO95155 1302 aa12.29□□□□□ -0.44
VCP-204ENST00000466100 SYCE3A1L190 88 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 CCDC169A6NNP5 214 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 DCDC2CA8MYV0 355 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 EIF3DO15371 548 aaKnown RBP eCLIP12.28□□□□□ -0.44
VCP-204ENST00000466100 LETM1O95202 739 aaPredicted RBP12.28□□□□□ -0.44
VCP-204ENST00000466100 EDN1P05305 212 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 IQCF3P0C7M6 154 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 DARSP14868 501 aaKnown RBP12.28□□□□□ -0.44
VCP-204ENST00000466100 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
VCP-204ENST00000466100 SCP2P22307 547 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 THPOP40225 353 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 PHKA2P46019 1235 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 CRYBB1P53674 252 aaPredicted RBP12.28□□□□□ -0.44
VCP-204ENST00000466100 NLRP12P59046 1061 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 MBTD1Q05BQ5 628 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 ALCAMQ13740 583 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 TFDP1Q14186 410 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 MBTPS1Q14703 1052 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 AMHR2Q16671 573 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 DPCR1Q3MIW9 517 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 ZC2HC1CQ53FD0 456 aaPredicted RBP12.28□□□□□ -0.44
VCP-204ENST00000466100 ZNF618Q5T7W0 954 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 ISM2Q6H9L7 571 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 HAUS6Q7Z4H7 955 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 RSPH3Q86UC2 560 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 SLC17A8Q8NDX2 589 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 HVCN1Q96D96 273 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 OSMRQ99650 979 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 CELF4Q9BZC1 486 aaKnown RBP12.28□□□□□ -0.44
VCP-204ENST00000466100 GTPBP4Q9BZE4 634 aaKnown RBP12.28□□□□□ -0.44
VCP-204ENST00000466100 OSBPL7Q9BZF2 842 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 C2orf40Q9H1Z8 148 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 TMEM134Q9H6X4 195 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 KCNG1Q9UIX4 513 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 CDY2AQ9Y6F7 541 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 PHLPP2Q6ZVD8 1323 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 MICAL3Q7RTP6 2002 aa12.28□□□□□ -0.44
VCP-204ENST00000466100 DENND3A2RUS2 1198 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 PPP1R3GB7ZBB8 358 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 H0YCG3 227 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 RBAK-RBAKDNI3L0D1 243 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 GCNT3O95395 438 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 CLTBP09497 229 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 CTSHP09668 335 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 PRCPP42785 496 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 EFNA5P52803 228 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 SMTNP53814 917 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 TYRO3Q06418 890 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 KCNA1Q09470 495 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 BFSP2Q13515 415 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 FAM187BQ17R55 369 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 L1TD1Q5T7N2 865 aaKnown RBP12.27□□□□□ -0.45
VCP-204ENST00000466100 PPP4R3CPQ6ZMV5 832 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 SRGAP1Q7Z6B7 1085 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 MAP4K3Q8IVH8 894 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 ADSSL1Q8N142 457 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 GUF1Q8N442 669 aaKnown RBP12.27□□□□□ -0.45
VCP-204ENST00000466100 DEPTORQ8TB45 409 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 ZNF507Q8TCN5 953 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 NLRP7Q8WX94 980 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 WNT8AQ9H1J5 351 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 FZD8Q9H461 694 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 TBX20Q9UMR3 447 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 UMODL1Q5DID0 1318 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 ANK1P16157 1881 aa12.27□□□□□ -0.45
VCP-204ENST00000466100 CCDC85CA6NKD9 419 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 TTLL13PA6NNM8 815 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 KIAA0355O15063 1070 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 PRPF6O94906 941 aaKnown RBP12.26□□□□□ -0.45
VCP-204ENST00000466100 PIGRP01833 764 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 SELPP16109 830 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 EIF4BP23588 611 aaKnown RBP12.26□□□□□ -0.45
VCP-204ENST00000466100 ABCD1P33897 745 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 ZNF445P59923 1031 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 GPNMBQ14956 572 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 STX1AQ16623 288 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 ZCWPW2Q504Y3 356 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 FBXO47Q5MNV8 452 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 LRRC8DQ7L1W4 858 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 FAM228AQ86W67 206 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 ZBTB8OSQ8IWT0 167 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 MYOCDQ8IZQ8 938 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 CCDC155Q8N6L0 562 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 MLKLQ8NB16 471 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 GCOM2Q9BZD3 368 aaPredicted RBP12.26□□□□□ -0.45
VCP-204ENST00000466100 GZF1Q9H116 711 aaPredicted RBP12.26□□□□□ -0.45
VCP-204ENST00000466100 IKZF4Q9H2S9 585 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 HIPK3Q9H422 1215 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 PCDHB13Q9Y5F0 798 aa12.26□□□□□ -0.45
VCP-204ENST00000466100 RALGAPA2Q2PPJ7 1873 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 TRIP11Q15643 1979 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 CITO14578 2027 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 TRIM43BA6NCK2 446 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 INO80B-WBP1J3KQ70 363 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms