RNA–Protein interactions for RNA: ENST00000465743.2

COL2A1-203, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 4

Gene COL2A1, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-203ENST00000465743 HOXA2O43364 376 aa22.45■■□□□ 1.18
COL2A1-203ENST00000465743 USO1O60763 962 aaKnown RBP22.45■■□□□ 1.18
COL2A1-203ENST00000465743 TBX10O75333 385 aa22.45■■□□□ 1.18
COL2A1-203ENST00000465743 LAG3P18627 525 aa22.45■■□□□ 1.18
COL2A1-203ENST00000465743 RARRES1P49788 294 aa22.45■■□□□ 1.18
COL2A1-203ENST00000465743 NAALADL2Q58DX5 795 aa22.45■■□□□ 1.18
COL2A1-203ENST00000465743 PTCRAQ6ISU1 281 aaPredicted RBP22.45■■□□□ 1.18
COL2A1-203ENST00000465743 POTEGQ6S5H5 508 aa22.45■■□□□ 1.18
COL2A1-203ENST00000465743 CCDC43Q96MW1 224 aaKnown RBP22.45■■□□□ 1.18
COL2A1-203ENST00000465743 TOB1P50616 345 aaPredicted RBP22.44■■□□□ 1.18
COL2A1-203ENST00000465743 CAPSQ13938 189 aa22.44■■□□□ 1.18
COL2A1-203ENST00000465743 CTC1Q2NKJ3 1217 aa22.44■■□□□ 1.18
COL2A1-203ENST00000465743 RBM23Q86U06 439 aaKnown RBP22.44■■□□□ 1.18
COL2A1-203ENST00000465743 CATSPER3Q86XQ3 398 aa22.44■■□□□ 1.18
COL2A1-203ENST00000465743 TCP11Q8WWU5 503 aa22.44■■□□□ 1.18
COL2A1-203ENST00000465743 INO80BQ9C086 356 aaPredicted RBP22.44■■□□□ 1.18
COL2A1-203ENST00000465743 CD320Q9NPF0 282 aa22.44■■□□□ 1.18
COL2A1-203ENST00000465743 GPRC5CQ9NQ84 441 aa22.44■■□□□ 1.18
COL2A1-203ENST00000465743 CHST12Q9NRB3 414 aa22.44■■□□□ 1.18
COL2A1-203ENST00000465743 AAASQ9NRG9 546 aa22.44■■□□□ 1.18
COL2A1-203ENST00000465743 ANKEF1Q9NU02 776 aa22.44■■□□□ 1.18
COL2A1-203ENST00000465743 FAM105AQ9NUU6 356 aa22.44■■□□□ 1.18
COL2A1-203ENST00000465743 GAS2O43903 313 aaKnown RBP22.43■■□□□ 1.18
COL2A1-203ENST00000465743 NRIP1P48552 1158 aa22.43■■□□□ 1.18
COL2A1-203ENST00000465743 ERVFC1P60507 584 aa22.43■■□□□ 1.18
COL2A1-203ENST00000465743 RBM10P98175 930 aaKnown RBP22.43■■□□□ 1.18
COL2A1-203ENST00000465743 KCNT2Q6UVM3 1135 aa22.43■■□□□ 1.18
COL2A1-203ENST00000465743 MAEAQ7L5Y9 396 aa22.43■■□□□ 1.18
COL2A1-203ENST00000465743 EXOC8Q8IYI6 725 aa22.43■■□□□ 1.18
COL2A1-203ENST00000465743 C4orf32Q8N8J7 132 aa22.43■■□□□ 1.18
COL2A1-203ENST00000465743 POLR3FQ9H1D9 316 aaPredicted RBP22.43■■□□□ 1.18
COL2A1-203ENST00000465743 INPP5FQ9Y2H2 1132 aa22.43■■□□□ 1.18
COL2A1-203ENST00000465743 EOMESO95936 686 aa22.42■■□□□ 1.18
COL2A1-203ENST00000465743 PDCP20941 246 aa22.42■■□□□ 1.18
COL2A1-203ENST00000465743 U2AF2P26368 475 aaKnown RBP eCLIP22.42■■□□□ 1.18
COL2A1-203ENST00000465743 HOXA11P31270 313 aaPredicted RBP22.42■■□□□ 1.18
COL2A1-203ENST00000465743 UBXN11Q5T124 520 aa22.42■■□□□ 1.18
COL2A1-203ENST00000465743 LARP1BQ659C4 914 aaKnown RBP22.42■■□□□ 1.18
COL2A1-203ENST00000465743 SRGAP1Q7Z6B7 1085 aa22.42■■□□□ 1.18
COL2A1-203ENST00000465743 ZNF558Q96NG5 402 aa22.42■■□□□ 1.18
COL2A1-203ENST00000465743 TRAIPQ9BWF2 469 aa22.42■■□□□ 1.18
COL2A1-203ENST00000465743 TLR9Q9NR96 1032 aa22.42■■□□□ 1.18
COL2A1-203ENST00000465743 NOL7Q9UMY1 257 aaKnown RBP22.42■■□□□ 1.18
COL2A1-203ENST00000465743 PCDHB6Q9Y5E3 794 aa22.42■■□□□ 1.18
COL2A1-203ENST00000465743 NT5C1B-RDH14C9J2C7 533 aa22.41■■□□□ 1.18
COL2A1-203ENST00000465743 B4GALT3O60512 393 aa22.41■■□□□ 1.18
COL2A1-203ENST00000465743 TSPAN1O60635 241 aa22.41■■□□□ 1.18
COL2A1-203ENST00000465743 DGAT1O75907 488 aa22.41■■□□□ 1.18
COL2A1-203ENST00000465743 HSP90AA1P07900 732 aaKnown RBP22.41■■□□□ 1.18
COL2A1-203ENST00000465743 GLRA2P23416 452 aa22.41■■□□□ 1.18
COL2A1-203ENST00000465743 PLPP4Q5VZY2 271 aa22.41■■□□□ 1.18
COL2A1-203ENST00000465743 TMEM173Q86WV6 379 aaPredicted RBP22.41■■□□□ 1.18
COL2A1-203ENST00000465743 KHSRPQ92945 711 aaKnown RBP eCLIP22.41■■□□□ 1.18
COL2A1-203ENST00000465743 CPB2Q96IY4 423 aa22.41■■□□□ 1.18
COL2A1-203ENST00000465743 TUFT1Q9NNX1 390 aa22.41■■□□□ 1.18
COL2A1-203ENST00000465743 PCDHB2Q9Y5E7 798 aa22.41■■□□□ 1.18
COL2A1-203ENST00000465743 GRXCR2A6NFK2 248 aa22.4■■□□□ 1.18
COL2A1-203ENST00000465743 PER2O15055 1255 aa22.4■■□□□ 1.18
COL2A1-203ENST00000465743 GLP2RO95838 553 aa22.4■■□□□ 1.18
COL2A1-203ENST00000465743 ARL2P36404 184 aa22.4■■□□□ 1.18
COL2A1-203ENST00000465743 TRAPPC10P48553 1259 aa22.4■■□□□ 1.18
COL2A1-203ENST00000465743 AFF1P51825 1210 aaKnown RBP22.4■■□□□ 1.18
COL2A1-203ENST00000465743 PTENP60484 403 aa22.4■■□□□ 1.18
COL2A1-203ENST00000465743 MBTD1Q05BQ5 628 aa22.4■■□□□ 1.18
COL2A1-203ENST00000465743 ORC2Q13416 577 aaPredicted RBP22.4■■□□□ 1.18
COL2A1-203ENST00000465743 ECM1Q16610 540 aa22.4■■□□□ 1.18
COL2A1-203ENST00000465743 MCTP1Q6DN14 999 aa22.4■■□□□ 1.18
COL2A1-203ENST00000465743 MICAL1Q8TDZ2 1067 aa22.4■■□□□ 1.18
COL2A1-203ENST00000465743 POLR3CQ9BUI4 534 aaPredicted RBP22.4■■□□□ 1.18
COL2A1-203ENST00000465743 PP2D1A8MPX8 630 aa22.39■■□□□ 1.17
COL2A1-203ENST00000465743 INO80B-WBP1J3KQ70 363 aa22.39■■□□□ 1.17
COL2A1-203ENST00000465743 FSCN2O14926 492 aa22.39■■□□□ 1.17
COL2A1-203ENST00000465743 ZC3H11AO75152 810 aaKnown RBP eCLIP22.39■■□□□ 1.17
COL2A1-203ENST00000465743 NDUFV1P49821 464 aa22.39■■□□□ 1.17
COL2A1-203ENST00000465743 RAB27AP51159 221 aa22.39■■□□□ 1.17
COL2A1-203ENST00000465743 UBE3AQ05086 875 aa22.39■■□□□ 1.17
COL2A1-203ENST00000465743 MXD4Q14582 209 aaPredicted RBP22.39■■□□□ 1.17
COL2A1-203ENST00000465743 AGMOQ6ZNB7 445 aa22.39■■□□□ 1.17
COL2A1-203ENST00000465743 SLC39A11Q8N1S5 342 aa22.39■■□□□ 1.17
COL2A1-203ENST00000465743 VN1R2Q8NFZ6 395 aa22.39■■□□□ 1.17
COL2A1-203ENST00000465743 BCL7CQ8WUZ0 217 aaPredicted RBP22.39■■□□□ 1.17
COL2A1-203ENST00000465743 MRPS27Q92552 414 aaKnown RBP22.39■■□□□ 1.17
COL2A1-203ENST00000465743 EIF2AQ9BY44 585 aaKnown RBP22.39■■□□□ 1.17
COL2A1-203ENST00000465743 GBP3Q9H0R5 595 aa22.39■■□□□ 1.17
COL2A1-203ENST00000465743 FOXD4L1Q9NU39 408 aa22.39■■□□□ 1.17
COL2A1-203ENST00000465743 TBC1D13Q9NVG8 400 aa22.39■■□□□ 1.17
COL2A1-203ENST00000465743 BARX2Q9UMQ3 279 aaPredicted RBP22.39■■□□□ 1.17
COL2A1-203ENST00000465743 ASAP2O43150 1006 aa22.38■■□□□ 1.17
COL2A1-203ENST00000465743 B4GALT5O43286 388 aa22.38■■□□□ 1.17
COL2A1-203ENST00000465743 ERLIN2O94905 339 aa22.38■■□□□ 1.17
COL2A1-203ENST00000465743 BCAR1P56945 870 aa22.38■■□□□ 1.17
COL2A1-203ENST00000465743 PTGDRQ13258 359 aa22.38■■□□□ 1.17
COL2A1-203ENST00000465743 ADAM15Q13444 863 aa22.38■■□□□ 1.17
COL2A1-203ENST00000465743 AMHR2Q16671 573 aa22.38■■□□□ 1.17
COL2A1-203ENST00000465743 CSPP1Q1MSJ5 1256 aa22.38■■□□□ 1.17
COL2A1-203ENST00000465743 NOMO2Q5JPE7 1267 aa22.38■■□□□ 1.17
COL2A1-203ENST00000465743 GLB1LQ6UWU2 654 aa22.38■■□□□ 1.17
COL2A1-203ENST00000465743 CDR2LQ86X02 465 aaPredicted RBP22.38■■□□□ 1.17
COL2A1-203ENST00000465743 FAM178BQ8IXR5 827 aa22.38■■□□□ 1.17
COL2A1-203ENST00000465743 BSNDQ8WZ55 320 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms