RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 SH2D3AQ9BRG2 576 aa9.75□□□□□ -0.85
UBA3-208ENST00000465627 NTPCRQ9BSD7 190 aaKnown RBP9.75□□□□□ -0.85
UBA3-208ENST00000465627 C16orf70Q9BSU1 422 aa9.75□□□□□ -0.85
UBA3-208ENST00000465627 ST6GALNAC4Q9H4F1 302 aa9.75□□□□□ -0.85
UBA3-208ENST00000465627 MLXIPQ9HAP2 919 aa9.75□□□□□ -0.85
UBA3-208ENST00000465627 CYP26B1Q9NR63 512 aa9.75□□□□□ -0.85
UBA3-208ENST00000465627 SAMSN1Q9NSI8 373 aaKnown RBP9.75□□□□□ -0.85
UBA3-208ENST00000465627 CTNND2Q9UQB3 1225 aa9.75□□□□□ -0.85
UBA3-208ENST00000465627 MAPK8IP1Q9UQF2 711 aa9.75□□□□□ -0.85
UBA3-208ENST00000465627 NFE2L3Q9Y4A8 694 aa9.75□□□□□ -0.85
UBA3-208ENST00000465627 COL4A3BPQ9Y5P4 624 aa9.75□□□□□ -0.85
UBA3-208ENST00000465627 SYNRGQ9UMZ2 1314 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 LTBP2Q14767 1821 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 ZMYM2Q9UBW7 1377 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 TPRP12270 2363 aaKnown RBP9.74□□□□□ -0.85
UBA3-208ENST00000465627 TRIM49BA6NDI0 452 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 LRRC10BA6NIK2 292 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 A6NJR5 290 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 SFI1A8K8P3 1242 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 EIF3DO15371 548 aaKnown RBP eCLIP9.74□□□□□ -0.85
UBA3-208ENST00000465627 GNRH1P01148 92 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 MAPTP10636 758 aaKnown RBP9.74□□□□□ -0.85
UBA3-208ENST00000465627 FLT3LGP49771 235 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 SLC26A2P50443 739 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 RTP1P59025 263 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 PLCB4Q15147 1175 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 LRRC41Q15345 812 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 CCDC85BQ15834 202 aaPredicted RBP9.74□□□□□ -0.85
UBA3-208ENST00000465627 XKR9Q5GH70 373 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 HERC4Q5GLZ8 1057 aaPredicted RBP9.74□□□□□ -0.85
UBA3-208ENST00000465627 C9orf50Q5SZB4 431 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 ANKRD40Q6AI12 368 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 KLHL10Q6JEL2 608 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 LRRC55Q6ZSA7 311 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 NYAP1Q6ZVC0 841 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 OTUD6AQ7L8S5 288 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 ZNF720Q7Z2F6 126 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 TRIM50Q86XT4 487 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 ATP8B4Q8TF62 1192 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 AFG1LQ8WV93 481 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 CCDC47Q96A33 483 aaKnown RBP9.74□□□□□ -0.85
UBA3-208ENST00000465627 PARVGQ9HBI0 331 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 POLD4Q9HCU8 107 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 INTS13Q9NVM9 706 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 Q9Y3F1 56 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 PPME1Q9Y570 386 aa9.74□□□□□ -0.85
UBA3-208ENST00000465627 ZNF318Q5VUA4 2279 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 BECN2A8MW95 431 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 PSMA7O14818 248 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 USO1O60763 962 aaKnown RBP9.73□□□□□ -0.85
UBA3-208ENST00000465627 PPFIA4O75335 1185 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 MAFO75444 373 aaPredicted RBP9.73□□□□□ -0.85
UBA3-208ENST00000465627 DGAT1O75907 488 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 ADCY5O95622 1261 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 LGALS2P05162 132 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 MYBP10242 640 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 ELNP15502 786 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 ARL2P36404 184 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 ZNF75DP51815 510 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 NCKAP1LP55160 1127 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 STX17P56962 302 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 TNFAIP2Q03169 654 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 PRKCZQ05513 592 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 MAP3K21Q5TCX8 1036 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 FAM160B1Q5W0V3 765 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 MYOCDQ8IZQ8 938 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 LINC01465Q8N7H1 131 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 TMEM174Q8WUU8 243 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 SPIRE2Q8WWL2 714 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 BBXQ8WY36 941 aaPredicted RBP9.73□□□□□ -0.85
UBA3-208ENST00000465627 BSNDQ8WZ55 320 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 FAM167AQ96KS9 214 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 CEP170P1Q96L14 293 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 SMARCAD1Q9H4L7 1026 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 GPRC5CQ9NQ84 441 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 SEPT9Q9UHD8 586 aaPredicted RBP9.73□□□□□ -0.85
UBA3-208ENST00000465627 ZHX1Q9UKY1 873 aaPredicted RBP9.73□□□□□ -0.85
UBA3-208ENST00000465627 TRAF3IP3Q9Y228 551 aa9.73□□□□□ -0.85
UBA3-208ENST00000465627 GOLGA6L19H0YKK7 550 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 TGFB1I1O43294 461 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 TBCAO75347 108 aaKnown RBP9.72□□□□□ -0.85
UBA3-208ENST00000465627 FAM13AO94988 1023 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 INHAP05111 366 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 KRT18P05783 430 aaKnown RBP9.72□□□□□ -0.85
UBA3-208ENST00000465627 MMP3P08254 477 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 PLS3P13797 630 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 CDC25BP30305 580 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 NMT1P30419 496 aaKnown RBP9.72□□□□□ -0.85
UBA3-208ENST00000465627 KCNQ1P51787 676 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 GTF2BQ00403 316 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 FANCCQ00597 558 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 TFF2Q03403 129 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 LRRC63Q05C16 580 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 KCNA1Q09470 495 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 CAMK2BQ13554 666 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 COL9A2Q14055 689 aaPredicted RBP9.72□□□□□ -0.85
UBA3-208ENST00000465627 NFIL3Q16649 462 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 MCPH1Q8NEM0 835 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 MRFAP1L1Q96HT8 127 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 UPF3AQ9H1J1 476 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms