RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 INTS7Q9NVH2 962 aaKnown RBP7.55□□□□□ -1.2
SMC4-205ENST00000465563 IFT57Q9NWB7 429 aa7.55□□□□□ -1.2
SMC4-205ENST00000465563 TMEM260Q9NX78 707 aa7.55□□□□□ -1.2
SMC4-205ENST00000465563 MTSS1O43312 755 aa7.54□□□□□ -1.2
SMC4-205ENST00000465563 RAMP2O60895 175 aa7.54□□□□□ -1.2
SMC4-205ENST00000465563 RPS6KA4O75676 772 aa7.54□□□□□ -1.2
SMC4-205ENST00000465563 FSBPO95073 299 aa7.54□□□□□ -1.2
SMC4-205ENST00000465563 ATP2A2P16615 1042 aaKnown RBP7.54□□□□□ -1.2
SMC4-205ENST00000465563 PTGS2P35354 604 aa7.54□□□□□ -1.2
SMC4-205ENST00000465563 RABL3Q5HYI8 236 aa7.54□□□□□ -1.2
SMC4-205ENST00000465563 UNQ6494/PRO21346Q6UXR6 183 aa7.54□□□□□ -1.2
SMC4-205ENST00000465563 HTR3DQ70Z44 454 aa7.54□□□□□ -1.2
SMC4-205ENST00000465563 KIF18BQ86Y91 864 aa7.54□□□□□ -1.2
SMC4-205ENST00000465563 SYNPOQ8N3V7 929 aa7.54□□□□□ -1.2
SMC4-205ENST00000465563 MB21D1Q8N884 522 aa7.54□□□□□ -1.2
SMC4-205ENST00000465563 MDGA1Q8NFP4 955 aa7.54□□□□□ -1.2
SMC4-205ENST00000465563 PGBD4Q96DM1 585 aa7.54□□□□□ -1.2
SMC4-205ENST00000465563 HIST1H2AHQ96KK5 128 aa7.54□□□□□ -1.2
SMC4-205ENST00000465563 HIST1H2AJQ99878 128 aa7.54□□□□□ -1.2
SMC4-205ENST00000465563 A0A0A6YYK5 440 aaPredicted RBP7.53□□□□□ -1.2
SMC4-205ENST00000465563 GAS7O60861 476 aa7.53□□□□□ -1.2
SMC4-205ENST00000465563 FAM20BO75063 409 aa7.53□□□□□ -1.2
SMC4-205ENST00000465563 GNAT2P19087 354 aa7.53□□□□□ -1.2
SMC4-205ENST00000465563 SLC25A43Q8WUT9 341 aaPredicted RBP7.53□□□□□ -1.2
SMC4-205ENST00000465563 HAS1Q92839 578 aa7.53□□□□□ -1.2
SMC4-205ENST00000465563 SOX7Q9BT81 388 aa7.53□□□□□ -1.2
SMC4-205ENST00000465563 TTPALQ9BTX7 342 aa7.53□□□□□ -1.2
SMC4-205ENST00000465563 ZMAT4Q9H898 229 aa7.53□□□□□ -1.2
SMC4-205ENST00000465563 H2AFY2Q9P0M6 372 aaPredicted RBP7.53□□□□□ -1.2
SMC4-205ENST00000465563 DMRT1Q9Y5R6 373 aa7.53□□□□□ -1.2
SMC4-205ENST00000465563 TMEM191CA6NGB0 347 aa7.52□□□□□ -1.21
SMC4-205ENST00000465563 KRT4P19013 534 aa7.52□□□□□ -1.21
SMC4-205ENST00000465563 CD40P25942 277 aa7.52□□□□□ -1.21
SMC4-205ENST00000465563 C1QL3Q5VWW1 255 aa7.52□□□□□ -1.21
SMC4-205ENST00000465563 PASD1Q8IV76 773 aa7.52□□□□□ -1.21
SMC4-205ENST00000465563 ST8SIA2Q92186 375 aa7.52□□□□□ -1.21
SMC4-205ENST00000465563 AGAP2Q99490 1192 aa7.52□□□□□ -1.21
SMC4-205ENST00000465563 TRPS1Q9UHF7 1281 aa7.52□□□□□ -1.21
SMC4-205ENST00000465563 F2P00734 622 aa7.51□□□□□ -1.21
SMC4-205ENST00000465563 GAAP10253 952 aa7.51□□□□□ -1.21
SMC4-205ENST00000465563 LRRC32Q14392 662 aa7.51□□□□□ -1.21
SMC4-205ENST00000465563 KRTAP15-1Q3LI76 137 aa7.51□□□□□ -1.21
SMC4-205ENST00000465563 PCSK4Q6UW60 755 aa7.51□□□□□ -1.21
SMC4-205ENST00000465563 Q6ZPA2 131 aa7.51□□□□□ -1.21
SMC4-205ENST00000465563 APBB1IPQ7Z5R6 666 aaPredicted RBP7.51□□□□□ -1.21
SMC4-205ENST00000465563 ZNF276Q8N554 614 aa7.51□□□□□ -1.21
SMC4-205ENST00000465563 EFHBQ8N7U6 833 aa7.51□□□□□ -1.21
SMC4-205ENST00000465563 NRP1O14786 923 aa7.5□□□□□ -1.21
SMC4-205ENST00000465563 FOXN1O15353 648 aa7.5□□□□□ -1.21
SMC4-205ENST00000465563 PCDH8O95206 1070 aa7.5□□□□□ -1.21
SMC4-205ENST00000465563 NEK4P51957 841 aa7.5□□□□□ -1.21
SMC4-205ENST00000465563 DCAF17Q5H9S7 520 aaPredicted RBP7.5□□□□□ -1.21
SMC4-205ENST00000465563 NAIF1Q69YI7 327 aaPredicted RBP7.5□□□□□ -1.21
SMC4-205ENST00000465563 LAIR1Q6GTX8 287 aa7.5□□□□□ -1.21
SMC4-205ENST00000465563 MRGPREQ86SM8 312 aa7.5□□□□□ -1.21
SMC4-205ENST00000465563 RPUSD2Q8IZ73 545 aaKnown RBP7.5□□□□□ -1.21
SMC4-205ENST00000465563 PPP1R14CQ8TAE6 165 aa7.5□□□□□ -1.21
SMC4-205ENST00000465563 ZG16BQ96DA0 208 aa7.5□□□□□ -1.21
SMC4-205ENST00000465563 ING3Q9NXR8 418 aa7.5□□□□□ -1.21
SMC4-205ENST00000465563 MYPNQ86TC9 1320 aa7.5□□□□□ -1.21
SMC4-205ENST00000465563 KPNA6O60684 536 aa7.49□□□□□ -1.21
SMC4-205ENST00000465563 STC2O76061 302 aa7.49□□□□□ -1.21
SMC4-205ENST00000465563 NANOS3P60323 173 aaKnown RBP7.49□□□□□ -1.21
SMC4-205ENST00000465563 TCEA2Q15560 299 aa7.49□□□□□ -1.21
SMC4-205ENST00000465563 DNAJC10Q8IXB1 793 aa7.49□□□□□ -1.21
SMC4-205ENST00000465563 UNC5BQ8IZJ1 945 aa7.49□□□□□ -1.21
SMC4-205ENST00000465563 SYNE4Q8N205 404 aa7.49□□□□□ -1.21
SMC4-205ENST00000465563 NXPE1Q8N323 547 aa7.49□□□□□ -1.21
SMC4-205ENST00000465563 LENG9Q96B70 501 aa7.49□□□□□ -1.21
SMC4-205ENST00000465563 USP36Q9P275 1121 aaKnown RBP7.49□□□□□ -1.21
SMC4-205ENST00000465563 PCDHB6Q9Y5E3 794 aa7.49□□□□□ -1.21
SMC4-205ENST00000465563 ELL2O00472 640 aaPredicted RBP7.48□□□□□ -1.21
SMC4-205ENST00000465563 HOXA3O43365 443 aaPredicted RBP7.48□□□□□ -1.21
SMC4-205ENST00000465563 ALDH1A2O94788 518 aa7.48□□□□□ -1.21
SMC4-205ENST00000465563 DSG1Q02413 1049 aa7.48□□□□□ -1.21
SMC4-205ENST00000465563 CCDC144BQ3MJ40 725 aa7.48□□□□□ -1.21
SMC4-205ENST00000465563 ESPNLQ6ZVH7 1005 aa7.48□□□□□ -1.21
SMC4-205ENST00000465563 CDYL2Q8N8U2 506 aa7.48□□□□□ -1.21
SMC4-205ENST00000465563 CHTF18Q8WVB6 975 aa7.48□□□□□ -1.21
SMC4-205ENST00000465563 EPC1Q9H2F5 836 aa7.48□□□□□ -1.21
SMC4-205ENST00000465563 THG1LQ9NWX6 298 aaKnown RBP7.48□□□□□ -1.21
SMC4-205ENST00000465563 ST20-MTHFSA0A0A6YYL1 179 aa7.47□□□□□ -1.21
SMC4-205ENST00000465563 ZNF891A8MT65 544 aaPredicted RBP7.47□□□□□ -1.21
SMC4-205ENST00000465563 GRXCR1A8MXD5 290 aa7.47□□□□□ -1.21
SMC4-205ENST00000465563 PPFIA2O75334 1257 aa7.47□□□□□ -1.21
SMC4-205ENST00000465563 HK1P19367 917 aa7.47□□□□□ -1.21
SMC4-205ENST00000465563 POU3F2P20265 443 aaPredicted RBP7.47□□□□□ -1.21
SMC4-205ENST00000465563 CD69Q07108 199 aa7.47□□□□□ -1.21
SMC4-205ENST00000465563 FSTL1Q12841 308 aa7.47□□□□□ -1.21
SMC4-205ENST00000465563 RHOUQ7L0Q8 258 aa7.47□□□□□ -1.21
SMC4-205ENST00000465563 ZNF575Q86XF7 245 aa7.47□□□□□ -1.21
SMC4-205ENST00000465563 PIK3C3Q8NEB9 887 aa7.47□□□□□ -1.21
SMC4-205ENST00000465563 FERMT2Q96AC1 680 aa7.47□□□□□ -1.21
SMC4-205ENST00000465563 CPPED1Q9BRF8 314 aaPredicted RBP7.47□□□□□ -1.21
SMC4-205ENST00000465563 ENKD1Q9H0I2 346 aa7.47□□□□□ -1.21
SMC4-205ENST00000465563 MSRAQ9UJ68 235 aa7.47□□□□□ -1.21
SMC4-205ENST00000465563 SORCS3Q9UPU3 1222 aa7.47□□□□□ -1.21
SMC4-205ENST00000465563 CD2APQ9Y5K6 639 aa7.47□□□□□ -1.21
SMC4-205ENST00000465563 RECQL4O94761 1208 aa7.46□□□□□ -1.22
SMC4-205ENST00000465563 KPNA1P52294 538 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms