RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 GLRA2P23416 452 aa11.03□□□□□ -0.64
CTNNB1-211ENST00000465552 MARCKSP29966 332 aaPredicted RBP11.03□□□□□ -0.64
CTNNB1-211ENST00000465552 SARSP49591 514 aaKnown RBP11.03□□□□□ -0.64
CTNNB1-211ENST00000465552 EMP3P54852 163 aa11.03□□□□□ -0.64
CTNNB1-211ENST00000465552 ADGRE1Q14246 886 aa11.03□□□□□ -0.64
CTNNB1-211ENST00000465552 PDIA5Q14554 519 aa11.03□□□□□ -0.64
CTNNB1-211ENST00000465552 SPECC1Q5M775 1068 aa11.03□□□□□ -0.64
CTNNB1-211ENST00000465552 TWF2Q6IBS0 349 aaKnown RBP11.03□□□□□ -0.64
CTNNB1-211ENST00000465552 CABP7Q86V35 215 aa11.03□□□□□ -0.64
CTNNB1-211ENST00000465552 NPAS4Q8IUM7 802 aa11.03□□□□□ -0.64
CTNNB1-211ENST00000465552 RASSF8Q8NHQ8 419 aa11.03□□□□□ -0.64
CTNNB1-211ENST00000465552 BSNDQ8WZ55 320 aa11.03□□□□□ -0.64
CTNNB1-211ENST00000465552 CDK5RAP3Q96JB5 506 aa11.03□□□□□ -0.64
CTNNB1-211ENST00000465552 PNMA5Q96PV4 448 aa11.03□□□□□ -0.64
CTNNB1-211ENST00000465552 USP28Q96RU2 1077 aa11.03□□□□□ -0.64
CTNNB1-211ENST00000465552 RGS18Q9NS28 235 aa11.03□□□□□ -0.64
CTNNB1-211ENST00000465552 HCSTQ9UBK5 93 aa11.03□□□□□ -0.64
CTNNB1-211ENST00000465552 DBR1Q9UK59 544 aaKnown RBP11.03□□□□□ -0.64
CTNNB1-211ENST00000465552 PPME1Q9Y570 386 aa11.03□□□□□ -0.64
CTNNB1-211ENST00000465552 PLXNA3P51805 1871 aa11.02□□□□□ -0.64
CTNNB1-211ENST00000465552 C9IYK1 514 aa11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 INO80B-WBP1J3KQ70 363 aa11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 DGKIO75912 1065 aa11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 STAG3L1P0CL83 205 aa11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 LIG1P18858 919 aa11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 CTNNB1P35222 781 aa11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 PHKA2P46019 1235 aa11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 RAD51AP2Q09MP3 1159 aa11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 GRB10Q13322 594 aa11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 BTG3Q14201 252 aaPredicted RBP11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 DHX8Q14562 1220 aaKnown RBP11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 DSC3Q14574 896 aa11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 PTPAQ15257 358 aa11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 CCDC85BQ15834 202 aaPredicted RBP11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 ARL6IP4Q66PJ3 421 aaKnown RBP11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 EXOC8Q8IYI6 725 aa11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 FIBCD1Q8N539 461 aa11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 MAFAQ8NHW3 353 aaPredicted RBP11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 CPB2Q96IY4 423 aa11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 CLIC6Q96NY7 704 aa11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 TGS1Q96RS0 853 aaKnown RBP11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 INO80BQ9C086 356 aaPredicted RBP11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 RC3H2Q9HBD1 1191 aaKnown RBP11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 C1orf112Q9NSG2 853 aa11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 DAXXQ9UER7 740 aaPredicted RBP11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 STXBP5LQ9Y2K9 1186 aa11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 PCDHB7Q9Y5E2 793 aa11.02□□□□□ -0.65
CTNNB1-211ENST00000465552 TBKBP1A7MCY6 615 aa11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 ERLIN2O94905 339 aa11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 EYA4O95677 639 aa11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 BMP15O95972 392 aa11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 F13A1P00488 732 aa11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 XRCC6P12956 609 aaKnown RBP eCLIP11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 HOXB3P14651 431 aaPredicted RBP11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 MUTP22033 750 aa11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 ARL2P36404 184 aa11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 TFDP1Q14186 410 aa11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 MXD4Q14582 209 aaPredicted RBP11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 KARSQ15046 597 aaKnown RBP11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 SPOUT1Q5T280 376 aaKnown RBP11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 SLC24A5Q71RS6 500 aa11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 SRGAP1Q7Z6B7 1085 aa11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 CDR2LQ86X02 465 aaPredicted RBP11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 MCPH1Q8NEM0 835 aa11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 FBXO22Q8NEZ5 403 aa11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 LRRC15Q8TF66 581 aa11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 LPPQ93052 612 aa11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 KIFC3Q9BVG8 833 aa11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 RUSC1Q9BVN2 902 aa11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 ZSCAN16Q9H4T2 348 aaPredicted RBP11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 TFIP11Q9UBB9 837 aaKnown RBP11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 DNM3Q9UQ16 869 aa11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 STK24Q9Y6E0 443 aa11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 MRPL42Q9Y6G3 142 aaKnown RBP11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 VWA8A3KMH1 1905 aa11.01□□□□□ -0.65
CTNNB1-211ENST00000465552 MEIS3P2A8K0S8 358 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 ASAP2O43150 1006 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 B4GALT5O43286 388 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 TSPAN1O60635 241 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 ZSCAN22P10073 491 aaPredicted RBP11□□□□□ -0.65
CTNNB1-211ENST00000465552 ATF7P17544 494 aaPredicted RBP11□□□□□ -0.65
CTNNB1-211ENST00000465552 UBA7P41226 1012 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 PTENP60484 403 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 ERVK-21P61565 698 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 CDC42EP1Q00587 391 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 MBTD1Q05BQ5 628 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 STK38Q15208 465 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 EPC2Q52LR7 807 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 USP49Q70CQ1 688 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 ECHDC2Q86YB7 292 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 TMEM192Q8IY95 271 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 CRIPAKQ8N1N5 446 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 ZNF710Q8N1W2 664 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 HELQQ8TDG4 1101 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 ZNF689Q96CS4 500 aaPredicted RBP11□□□□□ -0.65
CTNNB1-211ENST00000465552 CALML4Q96GE6 196 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 CSRNP2Q9H175 543 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 AGPAT5Q9NUQ2 364 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 TMEM161AQ9NX61 479 aa11□□□□□ -0.65
CTNNB1-211ENST00000465552 DACT1Q9NYF0 836 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms