RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 LLGL2Q6P1M3 1020 aa23.34■■□□□ 1.33
CSPG5-204ENST00000465441 SYCE2Q6PIF2 218 aa23.34■■□□□ 1.33
CSPG5-204ENST00000465441 EXOC8Q8IYI6 725 aa23.34■■□□□ 1.33
CSPG5-204ENST00000465441 MRPL43Q8N983 215 aaKnown RBP23.34■■□□□ 1.33
CSPG5-204ENST00000465441 PRPF31Q8WWY3 499 aaKnown RBP23.34■■□□□ 1.33
CSPG5-204ENST00000465441 SLC7A3Q8WY07 619 aa23.34■■□□□ 1.33
CSPG5-204ENST00000465441 DYDC2Q96IM9 177 aa23.34■■□□□ 1.33
CSPG5-204ENST00000465441 PPME1Q9Y570 386 aa23.34■■□□□ 1.33
CSPG5-204ENST00000465441 ZBTB39O15060 712 aa23.33■■□□□ 1.33
CSPG5-204ENST00000465441 OFD1O75665 1012 aa23.33■■□□□ 1.33
CSPG5-204ENST00000465441 BAG4O95429 457 aaKnown RBP23.33■■□□□ 1.33
CSPG5-204ENST00000465441 LARGE1O95461 756 aa23.33■■□□□ 1.33
CSPG5-204ENST00000465441 SRGAP2CP0DJJ0 459 aa23.33■■□□□ 1.33
CSPG5-204ENST00000465441 YWHABP31946 246 aaKnown RBP23.33■■□□□ 1.33
CSPG5-204ENST00000465441 KRT2P35908 639 aa23.33■■□□□ 1.33
CSPG5-204ENST00000465441 POLGP54098 1239 aaPredicted RBP23.33■■□□□ 1.33
CSPG5-204ENST00000465441 CTTNQ14247 550 aaKnown RBP23.33■■□□□ 1.33
CSPG5-204ENST00000465441 CBX2Q14781 532 aaPredicted RBP23.33■■□□□ 1.33
CSPG5-204ENST00000465441 OTUD6AQ7L8S5 288 aa23.33■■□□□ 1.33
CSPG5-204ENST00000465441 EDAQ92838 391 aa23.33■■□□□ 1.33
CSPG5-204ENST00000465441 TNFRSF25Q93038 417 aa23.33■■□□□ 1.33
CSPG5-204ENST00000465441 RPGRIP1Q96KN7 1286 aa23.33■■□□□ 1.33
CSPG5-204ENST00000465441 LXNQ9BS40 222 aa23.33■■□□□ 1.33
CSPG5-204ENST00000465441 APOL5Q9BWW9 433 aa23.33■■□□□ 1.33
CSPG5-204ENST00000465441 NRDE2Q9H7Z3 1164 aa23.33■■□□□ 1.33
CSPG5-204ENST00000465441 BMP2KQ9NSY1 1161 aaPredicted RBP23.33■■□□□ 1.33
CSPG5-204ENST00000465441 C2orf71A6NGG8 1288 aa23.32■■□□□ 1.32
CSPG5-204ENST00000465441 SLITRK3O94933 977 aa23.32■■□□□ 1.32
CSPG5-204ENST00000465441 CXCL14O95715 111 aa23.32■■□□□ 1.32
CSPG5-204ENST00000465441 SRGAP2BP0DMP2 458 aa23.32■■□□□ 1.32
CSPG5-204ENST00000465441 RFC5P40937 340 aa23.32■■□□□ 1.32
CSPG5-204ENST00000465441 SPIRE1Q08AE8 756 aa23.32■■□□□ 1.32
CSPG5-204ENST00000465441 SMC1AQ14683 1233 aaKnown RBP23.32■■□□□ 1.32
CSPG5-204ENST00000465441 SLFN12Q8IYM2 578 aa23.32■■□□□ 1.32
CSPG5-204ENST00000465441 PSPC1Q8WXF1 523 aaKnown RBP23.32■■□□□ 1.32
CSPG5-204ENST00000465441 ZSWIM4Q9H7M6 989 aa23.32■■□□□ 1.32
CSPG5-204ENST00000465441 MINDY3Q9H8M7 445 aa23.32■■□□□ 1.32
CSPG5-204ENST00000465441 GALTP07902 379 aa23.31■■□□□ 1.32
CSPG5-204ENST00000465441 LAMTOR4Q0VGL1 99 aa23.31■■□□□ 1.32
CSPG5-204ENST00000465441 XKR9Q5GH70 373 aa23.31■■□□□ 1.32
CSPG5-204ENST00000465441 NOMO2Q5JPE7 1267 aa23.31■■□□□ 1.32
CSPG5-204ENST00000465441 GLB1LQ6UWU2 654 aa23.31■■□□□ 1.32
CSPG5-204ENST00000465441 HFE2Q6ZVN8 426 aa23.31■■□□□ 1.32
CSPG5-204ENST00000465441 SRGAP1Q7Z6B7 1085 aa23.31■■□□□ 1.32
CSPG5-204ENST00000465441 RSPH1Q8WYR4 309 aa23.31■■□□□ 1.32
CSPG5-204ENST00000465441 GTF3C6Q969F1 213 aa23.31■■□□□ 1.32
CSPG5-204ENST00000465441 PGBD4Q96DM1 585 aa23.31■■□□□ 1.32
CSPG5-204ENST00000465441 TMEM169Q96HH4 297 aa23.31■■□□□ 1.32
CSPG5-204ENST00000465441 AGPAT5Q9NUQ2 364 aa23.31■■□□□ 1.32
CSPG5-204ENST00000465441 TBC1D13Q9NVG8 400 aa23.31■■□□□ 1.32
CSPG5-204ENST00000465441 INPP5FQ9Y2H2 1132 aa23.31■■□□□ 1.32
CSPG5-204ENST00000465441 PCDHB2Q9Y5E7 798 aa23.31■■□□□ 1.32
CSPG5-204ENST00000465441 ASAP2O43150 1006 aa23.3■■□□□ 1.32
CSPG5-204ENST00000465441 CLASP2O75122 1294 aaKnown RBP23.3■■□□□ 1.32
CSPG5-204ENST00000465441 ZC3H11AO75152 810 aaKnown RBP eCLIP23.3■■□□□ 1.32
CSPG5-204ENST00000465441 RAB27AP51159 221 aa23.3■■□□□ 1.32
CSPG5-204ENST00000465441 CYP4A11Q02928 519 aa23.3■■□□□ 1.32
CSPG5-204ENST00000465441 TMEM173Q86WV6 379 aaPredicted RBP23.3■■□□□ 1.32
CSPG5-204ENST00000465441 TPH2Q8IWU9 490 aa23.3■■□□□ 1.32
CSPG5-204ENST00000465441 NSUN7Q8NE18 718 aaKnown RBP23.3■■□□□ 1.32
CSPG5-204ENST00000465441 TCP11Q8WWU5 503 aa23.3■■□□□ 1.32
CSPG5-204ENST00000465441 BRMS1Q9HCU9 246 aa23.3■■□□□ 1.32
CSPG5-204ENST00000465441 BTBD18B2RXH4 712 aa23.29■■□□□ 1.32
CSPG5-204ENST00000465441 HOXB8P17481 243 aaPredicted RBP23.29■■□□□ 1.32
CSPG5-204ENST00000465441 HOXA11P31270 313 aaPredicted RBP23.29■■□□□ 1.32
CSPG5-204ENST00000465441 HOXD11P31277 338 aaPredicted RBP23.29■■□□□ 1.32
CSPG5-204ENST00000465441 CA8P35219 290 aa23.29■■□□□ 1.32
CSPG5-204ENST00000465441 BMS1Q14692 1282 aaKnown RBP23.29■■□□□ 1.32
CSPG5-204ENST00000465441 AGMOQ6ZNB7 445 aa23.29■■□□□ 1.32
CSPG5-204ENST00000465441 MRPL10Q7Z7H8 261 aaKnown RBP23.29■■□□□ 1.32
CSPG5-204ENST00000465441 FERMT3Q86UX7 667 aa23.29■■□□□ 1.32
CSPG5-204ENST00000465441 VPS52Q8N1B4 723 aa23.29■■□□□ 1.32
CSPG5-204ENST00000465441 CASP10Q92851 521 aa23.29■■□□□ 1.32
CSPG5-204ENST00000465441 IGSF21Q96ID5 467 aa23.29■■□□□ 1.32
CSPG5-204ENST00000465441 EIF2AK1Q9BQI3 630 aaKnown RBP23.29■■□□□ 1.32
CSPG5-204ENST00000465441 PCDHA12Q9UN75 941 aa23.29■■□□□ 1.32
CSPG5-204ENST00000465441 HCFC2Q9Y5Z7 792 aa23.29■■□□□ 1.32
CSPG5-204ENST00000465441 GAS2O43903 313 aaKnown RBP23.28■■□□□ 1.32
CSPG5-204ENST00000465441 NEK4P51957 841 aa23.28■■□□□ 1.32
CSPG5-204ENST00000465441 ZXDAP98168 799 aa23.28■■□□□ 1.32
CSPG5-204ENST00000465441 RNASELQ05823 741 aaKnown RBP23.28■■□□□ 1.32
CSPG5-204ENST00000465441 EMC2Q15006 297 aa23.28■■□□□ 1.32
CSPG5-204ENST00000465441 UBXN11Q5T124 520 aa23.28■■□□□ 1.32
CSPG5-204ENST00000465441 DDX53Q86TM3 631 aaKnown RBP23.28■■□□□ 1.32
CSPG5-204ENST00000465441 ZNF280BQ86YH2 543 aa23.28■■□□□ 1.32
CSPG5-204ENST00000465441 RNF149Q8NC42 400 aa23.28■■□□□ 1.32
CSPG5-204ENST00000465441 MTRQ99707 1265 aa23.28■■□□□ 1.32
CSPG5-204ENST00000465441 HSD17B14Q9BPX1 270 aa23.28■■□□□ 1.32
CSPG5-204ENST00000465441 ZBP1Q9H171 429 aa23.28■■□□□ 1.32
CSPG5-204ENST00000465441 DNAJB4Q9UDY4 337 aa23.28■■□□□ 1.32
CSPG5-204ENST00000465441 JAK2O60674 1132 aa23.27■■□□□ 1.32
CSPG5-204ENST00000465441 AFF1P51825 1210 aaKnown RBP23.27■■□□□ 1.32
CSPG5-204ENST00000465441 FOSBP53539 338 aa23.27■■□□□ 1.32
CSPG5-204ENST00000465441 CALCRLQ16602 461 aa23.27■■□□□ 1.32
CSPG5-204ENST00000465441 TRIM67Q6ZTA4 783 aa23.27■■□□□ 1.32
CSPG5-204ENST00000465441 BCL7CQ8WUZ0 217 aaPredicted RBP23.27■■□□□ 1.32
CSPG5-204ENST00000465441 AUTS2Q8WXX7 1259 aa23.27■■□□□ 1.32
CSPG5-204ENST00000465441 MFSD14AQ96MC6 490 aa23.27■■□□□ 1.32
CSPG5-204ENST00000465441 GBP3Q9H0R5 595 aa23.27■■□□□ 1.32
CSPG5-204ENST00000465441 XPNPEP1Q9NQW7 623 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms