RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 RBBP8NLQ8NC74 664 aaPredicted RBP6.78□□□□□ -1.32
SSBP1-204ENST00000465167 MAFAQ8NHW3 353 aaPredicted RBP6.78□□□□□ -1.32
SSBP1-204ENST00000465167 DCAF4Q8WV16 495 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 TRIM43Q96BQ3 446 aaPredicted RBP6.78□□□□□ -1.32
SSBP1-204ENST00000465167 CHMP4CQ96CF2 233 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 ANAPC16Q96DE5 110 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 TOX2Q96NM4 488 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 SEZ6LQ9BYH1 1024 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 NOP53Q9NZM5 478 aaKnown RBP6.78□□□□□ -1.32
SSBP1-204ENST00000465167 ADD3Q9UEY8 706 aaKnown RBP6.78□□□□□ -1.32
SSBP1-204ENST00000465167 RIPK3Q9Y572 518 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 CORINQ9Y5Q5 1042 aa6.78□□□□□ -1.32
SSBP1-204ENST00000465167 CNTNAP5Q8WYK1 1306 aa6.77□□□□□ -1.32
SSBP1-204ENST00000465167 ARVCFO00192 962 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 TMPRSS2O15393 492 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 PLA2G6O60733 806 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 ADAMTS4O75173 837 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 HTR3BO95264 441 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 SNAI1O95863 264 aaPredicted RBP6.77□□□□□ -1.33
SSBP1-204ENST00000465167 TIMP1P01033 207 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 GJA9P57773 515 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 ID3Q02535 119 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 MCMDC2Q4G0Z9 681 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 PRRT3Q5FWE3 981 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 C9orf50Q5SZB4 431 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 FBXW10Q5XX13 1052 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 RCSD1Q6JBY9 416 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 PSRC1Q6PGN9 363 aaPredicted RBP6.77□□□□□ -1.33
SSBP1-204ENST00000465167 NSMFQ6X4W1 530 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 ANKS3Q6ZW76 656 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 KCTD1Q719H9 257 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.77□□□□□ -1.33
SSBP1-204ENST00000465167 CKAP2LQ8IYA6 745 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 TMEM130Q8N3G9 435 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 SMG8Q8ND04 991 aaKnown RBP6.77□□□□□ -1.33
SSBP1-204ENST00000465167 KLHDC9Q8NEP7 349 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 OR6P1Q8NGX9 317 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 PI4K2BQ8TCG2 481 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 RILPL2Q969X0 211 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 CRBNQ96SW2 442 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 SEC62Q99442 399 aaKnown RBP6.77□□□□□ -1.33
SSBP1-204ENST00000465167 UPF3AQ9H1J1 476 aaKnown RBP6.77□□□□□ -1.33
SSBP1-204ENST00000465167 PDCL3Q9H2J4 239 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 SEMA6BQ9H3T3 888 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 RNF41Q9H4P4 317 aaPredicted RBP6.77□□□□□ -1.33
SSBP1-204ENST00000465167 SUGCTQ9HAC7 445 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 CYP4F12Q9HCS2 524 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 HELLSQ9NRZ9 838 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 PRKAG3Q9UGI9 489 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 HIF3AQ9Y2N7 669 aa6.77□□□□□ -1.33
SSBP1-204ENST00000465167 LRRC37A2A6NM11 1700 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 PTPDC1A2A3K4 754 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 PRAMEF27A3QJZ7 478 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 KLF4O43474 513 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 ICAM1P05362 532 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 TOP1P11387 765 aaKnown RBP6.76□□□□□ -1.33
SSBP1-204ENST00000465167 PCP11498 1178 aaKnown RBP6.76□□□□□ -1.33
SSBP1-204ENST00000465167 CPT1AP50416 773 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 TERF1P54274 439 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 CNTN2Q02246 1040 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 RAB30Q15771 203 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 GRIK4Q16099 956 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 FSCN1Q16658 493 aaKnown RBP6.76□□□□□ -1.33
SSBP1-204ENST00000465167 CCDC178Q5BJE1 867 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 SYDE2Q5VT97 1194 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 IQSEC1Q6DN90 963 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 MFSD5Q6N075 450 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 SHISA2Q6UWI4 295 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 TICAM2Q86XR7 235 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 FAM169BQ8N8A8 192 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 MYLIPQ8WY64 445 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 TIFAQ96CG3 184 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 GUCD1Q96NT3 240 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 CDX2Q99626 313 aaPredicted RBP6.76□□□□□ -1.33
SSBP1-204ENST00000465167 WNT10AQ9GZT5 417 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 HIPK3Q9H422 1215 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 VTA1Q9NP79 307 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 A1CFQ9NQ94 594 aaKnown RBP6.76□□□□□ -1.33
SSBP1-204ENST00000465167 CRIM1Q9NZV1 1036 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 REV1Q9UBZ9 1251 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 MSRAQ9UJ68 235 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 Q9Y3F1 56 aa6.76□□□□□ -1.33
SSBP1-204ENST00000465167 FRMPD2Q68DX3 1309 aaPredicted RBP6.76□□□□□ -1.33
SSBP1-204ENST00000465167 LOC102724159A0A0B4J2E5 919 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 MYADML2A6NDP7 307 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 GOLGA6L3A6NEY3 463 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 MEIS3P2A8K0S8 358 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 F8W735 103 aaPredicted RBP6.75□□□□□ -1.33
SSBP1-204ENST00000465167 HIP1O00291 1037 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 SMAD7O15105 426 aaKnown RBP6.75□□□□□ -1.33
SSBP1-204ENST00000465167 FANCGO15287 622 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 DYNC1LI2O43237 492 aaPredicted RBP6.75□□□□□ -1.33
SSBP1-204ENST00000465167 ORC4O43929 436 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 TIAF1O95411 115 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 SUPT20HL2P0C7V6 817 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 ADH5P11766 374 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 PLCG1P19174 1290 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 NT5C2P49902 561 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 PDE1AP54750 535 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 BEX3Q00994 111 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms