RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 POLGP54098 1239 aaPredicted RBP25.51■■□□□ 1.67
USP42-205ENST00000465073 SIGLEC14Q08ET2 396 aa25.51■■□□□ 1.67
USP42-205ENST00000465073 NOMO2Q5JPE7 1267 aa25.51■■□□□ 1.67
USP42-205ENST00000465073 CES5AQ6NT32 575 aa25.51■■□□□ 1.67
USP42-205ENST00000465073 LPPQ93052 612 aa25.51■■□□□ 1.67
USP42-205ENST00000465073 NAP1L4Q99733 375 aaKnown RBP25.51■■□□□ 1.67
USP42-205ENST00000465073 CLASP2O75122 1294 aaKnown RBP25.5■■□□□ 1.67
USP42-205ENST00000465073 NPEPPSP55786 919 aa25.5■■□□□ 1.67
USP42-205ENST00000465073 ITIH3Q06033 890 aa25.5■■□□□ 1.67
USP42-205ENST00000465073 SCRN1Q12765 414 aa25.5■■□□□ 1.67
USP42-205ENST00000465073 DDX53Q86TM3 631 aaKnown RBP25.5■■□□□ 1.67
USP42-205ENST00000465073 SUGP1Q8IWZ8 645 aaKnown RBP25.5■■□□□ 1.67
USP42-205ENST00000465073 VPS52Q8N1B4 723 aa25.5■■□□□ 1.67
USP42-205ENST00000465073 CEP170P1Q96L14 293 aa25.5■■□□□ 1.67
USP42-205ENST00000465073 NECTIN4Q96NY8 510 aa25.5■■□□□ 1.67
USP42-205ENST00000465073 ADAM7Q9H2U9 754 aa25.5■■□□□ 1.67
USP42-205ENST00000465073 IFT122Q9HBG6 1241 aa25.5■■□□□ 1.67
USP42-205ENST00000465073 NR2E1Q9Y466 385 aa25.5■■□□□ 1.67
USP42-205ENST00000465073 COL4A3BPQ9Y5P4 624 aa25.5■■□□□ 1.67
USP42-205ENST00000465073 STK36Q9NRP7 1315 aa25.49■■□□□ 1.67
USP42-205ENST00000465073 TBX3O15119 743 aa25.49■■□□□ 1.67
USP42-205ENST00000465073 RFC5P40937 340 aa25.49■■□□□ 1.67
USP42-205ENST00000465073 MRE11P49959 708 aa25.49■■□□□ 1.67
USP42-205ENST00000465073 GIT2Q14161 759 aa25.49■■□□□ 1.67
USP42-205ENST00000465073 PTPN21Q16825 1174 aa25.49■■□□□ 1.67
USP42-205ENST00000465073 LONRF3Q496Y0 759 aa25.49■■□□□ 1.67
USP42-205ENST00000465073 TMEM87AQ8NBN3 555 aa25.49■■□□□ 1.67
USP42-205ENST00000465073 PGBD4Q96DM1 585 aa25.49■■□□□ 1.67
USP42-205ENST00000465073 IGSF21Q96ID5 467 aa25.49■■□□□ 1.67
USP42-205ENST00000465073 DHX33Q9H6R0 707 aaKnown RBP25.49■■□□□ 1.67
USP42-205ENST00000465073 NRDE2Q9H7Z3 1164 aa25.49■■□□□ 1.67
USP42-205ENST00000465073 TBC1D13Q9NVG8 400 aa25.49■■□□□ 1.67
USP42-205ENST00000465073 IRAK3Q9Y616 596 aa25.49■■□□□ 1.67
USP42-205ENST00000465073 OFD1O75665 1012 aa25.48■■□□□ 1.67
USP42-205ENST00000465073 CA8P35219 290 aa25.48■■□□□ 1.67
USP42-205ENST00000465073 RNASELQ05823 741 aaKnown RBP25.48■■□□□ 1.67
USP42-205ENST00000465073 C4orf19Q8IY42 314 aa25.48■■□□□ 1.67
USP42-205ENST00000465073 FBXL6Q8N531 539 aa25.48■■□□□ 1.67
USP42-205ENST00000465073 PRPF31Q8WWY3 499 aaKnown RBP25.48■■□□□ 1.67
USP42-205ENST00000465073 PSPC1Q8WXF1 523 aaKnown RBP25.48■■□□□ 1.67
USP42-205ENST00000465073 PRRX2Q99811 253 aa25.48■■□□□ 1.67
USP42-205ENST00000465073 ZBP1Q9H171 429 aa25.48■■□□□ 1.67
USP42-205ENST00000465073 AGPAT5Q9NUQ2 364 aa25.48■■□□□ 1.67
USP42-205ENST00000465073 INPP5FQ9Y2H2 1132 aa25.48■■□□□ 1.67
USP42-205ENST00000465073 PCDHB2Q9Y5E7 798 aa25.48■■□□□ 1.67
USP42-205ENST00000465073 WDFY4Q6ZS81 3184 aa25.48■■□□□ 1.67
USP42-205ENST00000465073 MARCH6O60337 910 aa25.47■■□□□ 1.67
USP42-205ENST00000465073 CCNT1O60563 726 aaKnown RBP25.47■■□□□ 1.67
USP42-205ENST00000465073 PFKFB2O60825 505 aa25.47■■□□□ 1.67
USP42-205ENST00000465073 GALTP07902 379 aa25.47■■□□□ 1.67
USP42-205ENST00000465073 EPHA7Q15375 998 aa25.47■■□□□ 1.67
USP42-205ENST00000465073 SRGAP1Q7Z6B7 1085 aa25.47■■□□□ 1.67
USP42-205ENST00000465073 ZNF579Q8NAF0 562 aaKnown RBP25.47■■□□□ 1.67
USP42-205ENST00000465073 HAS1Q92839 578 aa25.47■■□□□ 1.67
USP42-205ENST00000465073 WRAP73Q9P2S5 460 aaPredicted RBP25.47■■□□□ 1.67
USP42-205ENST00000465073 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.47■■□□□ 1.67
USP42-205ENST00000465073 MEIS3P2A8K0S8 358 aa25.47■■□□□ 1.67
USP42-205ENST00000465073 GAS2O43903 313 aaKnown RBP25.47■■□□□ 1.67
USP42-205ENST00000465073 CTSAP10619 480 aa25.47■■□□□ 1.67
USP42-205ENST00000465073 PIK3AP1Q6ZUJ8 805 aa25.47■■□□□ 1.67
USP42-205ENST00000465073 OTUD6AQ7L8S5 288 aa25.47■■□□□ 1.67
USP42-205ENST00000465073 TMEM173Q86WV6 379 aaPredicted RBP25.47■■□□□ 1.67
USP42-205ENST00000465073 DZANK1Q9NVP4 752 aa25.47■■□□□ 1.67
USP42-205ENST00000465073 TPCN1Q9ULQ1 816 aa25.47■■□□□ 1.67
USP42-205ENST00000465073 SRGAP2CP0DJJ0 459 aa25.46■■□□□ 1.67
USP42-205ENST00000465073 MTHFRP42898 656 aa25.46■■□□□ 1.67
USP42-205ENST00000465073 MRPL10Q7Z7H8 261 aaKnown RBP25.46■■□□□ 1.67
USP42-205ENST00000465073 URGCPQ8TCY9 931 aa25.46■■□□□ 1.67
USP42-205ENST00000465073 OXER1Q8TDS5 423 aa25.46■■□□□ 1.67
USP42-205ENST00000465073 TCP11Q8WWU5 503 aa25.46■■□□□ 1.67
USP42-205ENST00000465073 TMEM143Q96AN5 459 aa25.46■■□□□ 1.67
USP42-205ENST00000465073 ASIC4Q96FT7 647 aa25.46■■□□□ 1.67
USP42-205ENST00000465073 RIPOR3Q96MK2 946 aa25.46■■□□□ 1.67
USP42-205ENST00000465073 TSHZ2Q9NRE2 1034 aa25.46■■□□□ 1.67
USP42-205ENST00000465073 STK39Q9UEW8 545 aa25.46■■□□□ 1.67
USP42-205ENST00000465073 ZDBF2Q9HCK1 2354 aa25.45■■□□□ 1.66
USP42-205ENST00000465073 ASAP2O43150 1006 aa25.45■■□□□ 1.66
USP42-205ENST00000465073 YWHABP31946 246 aaKnown RBP25.45■■□□□ 1.66
USP42-205ENST00000465073 LAMTOR4Q0VGL1 99 aa25.45■■□□□ 1.66
USP42-205ENST00000465073 IER5LQ5T953 404 aa25.45■■□□□ 1.66
USP42-205ENST00000465073 ZBTB33Q86T24 672 aa25.45■■□□□ 1.66
USP42-205ENST00000465073 AUTS2Q8WXX7 1259 aa25.45■■□□□ 1.66
USP42-205ENST00000465073 WASF1Q92558 559 aa25.45■■□□□ 1.66
USP42-205ENST00000465073 LXNQ9BS40 222 aa25.45■■□□□ 1.66
USP42-205ENST00000465073 POMKQ9H5K3 350 aa25.45■■□□□ 1.66
USP42-205ENST00000465073 GJB4Q9NTQ9 266 aa25.45■■□□□ 1.66
USP42-205ENST00000465073 KANSL3Q9P2N6 904 aa25.45■■□□□ 1.66
USP42-205ENST00000465073 BAG4O95429 457 aaKnown RBP25.44■■□□□ 1.66
USP42-205ENST00000465073 SP100P23497 879 aaPredicted RBP25.44■■□□□ 1.66
USP42-205ENST00000465073 SLC11A1P49279 550 aa25.44■■□□□ 1.66
USP42-205ENST00000465073 AGMOQ6ZNB7 445 aa25.44■■□□□ 1.66
USP42-205ENST00000465073 SLFN12Q8IYM2 578 aa25.44■■□□□ 1.66
USP42-205ENST00000465073 BCL7CQ8WUZ0 217 aaPredicted RBP25.44■■□□□ 1.66
USP42-205ENST00000465073 GBP3Q9H0R5 595 aa25.44■■□□□ 1.66
USP42-205ENST00000465073 ZSWIM4Q9H7M6 989 aa25.44■■□□□ 1.66
USP42-205ENST00000465073 MINDY3Q9H8M7 445 aa25.44■■□□□ 1.66
USP42-205ENST00000465073 RGL1Q9NZL6 768 aa25.44■■□□□ 1.66
USP42-205ENST00000465073 DNAJB4Q9UDY4 337 aa25.44■■□□□ 1.66
USP42-205ENST00000465073 CDH22Q9UJ99 828 aa25.44■■□□□ 1.66
USP42-205ENST00000465073 CNTNAP2Q9UHC6 1331 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms