RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 GUCY2FP51841 1108 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 SCFD2Q8WU76 684 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 KAT5Q92993 513 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 ATG4CQ96DT6 458 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 PDCD2LQ9BRP1 358 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 UBE2TQ9NPD8 197 aaPredicted RBP20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 PXMP2Q9NR77 195 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 HSPBP1Q9NZL4 362 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 INTUQ9ULD6 942 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 NOC2LQ9Y3T9 749 aaKnown RBP20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 TELO2Q9Y4R8 837 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 RLFQ13129 1914 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 CES2O00748 559 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 BUB1BO60566 1050 aaPredicted RBP20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 ITGA4P13612 1032 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 NBPF12Q5TAG4 269 aaPredicted RBP20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 FOXR1Q6PIV2 292 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 RNF207Q6ZRF8 634 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 ACTRT1Q8TDG2 376 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 JDP2Q8WYK2 163 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 PBKQ96KB5 322 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 ACCSQ96QU6 501 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 THAP2Q9H0W7 228 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 TMEM206Q9H813 350 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 PIM2Q9P1W9 311 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 ZNFX1Q9P2E3 1918 aaKnown RBP20.28■□□□□ 0.84
TSPAN4-210ENST00000464987 ATP8B3O60423 1300 aa20.28■□□□□ 0.84
TSPAN4-210ENST00000464987 KRT13P13646 458 aa20.28■□□□□ 0.84
TSPAN4-210ENST00000464987 LMNB1P20700 586 aa20.28■□□□□ 0.84
TSPAN4-210ENST00000464987 SOX10P56693 466 aa20.28■□□□□ 0.84
TSPAN4-210ENST00000464987 PRAMEF18Q5VWM3 479 aa20.28■□□□□ 0.84
TSPAN4-210ENST00000464987 ZIM3Q96PE6 472 aa20.28■□□□□ 0.84
TSPAN4-210ENST00000464987 DDX47Q9H0S4 455 aaKnown RBP20.28■□□□□ 0.84
TSPAN4-210ENST00000464987 TAOK3Q9H2K8 898 aa20.28■□□□□ 0.84
TSPAN4-210ENST00000464987 TBC1D22BQ9NU19 505 aa20.28■□□□□ 0.84
TSPAN4-210ENST00000464987 CTNND1O60716 968 aaKnown RBP20.27■□□□□ 0.84
TSPAN4-210ENST00000464987 LYPLA2O95372 231 aa20.27■□□□□ 0.84
TSPAN4-210ENST00000464987 ADRB2P07550 413 aa20.27■□□□□ 0.84
TSPAN4-210ENST00000464987 GTF2BQ00403 316 aa20.27■□□□□ 0.84
TSPAN4-210ENST00000464987 INTS8Q75QN2 995 aaKnown RBP20.27■□□□□ 0.84
TSPAN4-210ENST00000464987 ARL8AQ96BM9 186 aa20.27■□□□□ 0.84
TSPAN4-210ENST00000464987 CCDC43Q96MW1 224 aaKnown RBP20.27■□□□□ 0.84
TSPAN4-210ENST00000464987 SH3GL2Q99962 352 aa20.27■□□□□ 0.84
TSPAN4-210ENST00000464987 NFKBIEO00221 500 aa20.27■□□□□ 0.84
TSPAN4-210ENST00000464987 TNFAIP3P21580 790 aa20.27■□□□□ 0.84
TSPAN4-210ENST00000464987 ERVK-9P63128 1117 aa20.27■□□□□ 0.84
TSPAN4-210ENST00000464987 TNNC1P63316 161 aa20.27■□□□□ 0.84
TSPAN4-210ENST00000464987 XKR9Q5GH70 373 aa20.27■□□□□ 0.84
TSPAN4-210ENST00000464987 FAM102BQ5T8I3 360 aa20.27■□□□□ 0.84
TSPAN4-210ENST00000464987 C4orf19Q8IY42 314 aa20.27■□□□□ 0.84
TSPAN4-210ENST00000464987 HES6Q96HZ4 224 aa20.27■□□□□ 0.84
TSPAN4-210ENST00000464987 SUCLA2Q9P2R7 463 aaPredicted RBP20.27■□□□□ 0.84
TSPAN4-210ENST00000464987 HACL1Q9UJ83 578 aa20.27■□□□□ 0.84
TSPAN4-210ENST00000464987 COG5Q9UP83 839 aa20.27■□□□□ 0.84
TSPAN4-210ENST00000464987 DOCK1Q14185 1865 aa20.27■□□□□ 0.83
TSPAN4-210ENST00000464987 NCANO14594 1321 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 GOLGA6CA6NDK9 693 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 ANKRD63C9JTQ0 380 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 VWA5AO00534 786 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 TMEM253P0C7T8 217 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 GOLGA6DP0CG33 693 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 MAPTP10636 758 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 PPATQ06203 517 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 BAATQ14032 418 aaPredicted RBP20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 MYBPC2Q14324 1141 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 KIF22Q14807 665 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 EPC2Q52LR7 807 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 TTMPQ5BVD1 217 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 ARHGEF16Q5VV41 709 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 TAF3Q5VWG9 929 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 DDX42Q86XP3 938 aaKnown RBP eCLIP20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 XXYLT1Q8NBI6 393 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 RFFLQ8WZ73 363 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 ZKSCAN4Q969J2 545 aaPredicted RBP20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 ELMO3Q96BJ8 720 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.26■□□□□ 0.832e-12■□□□□ 9.2
TSPAN4-210ENST00000464987 ACP6Q9NPH0 428 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 GOLGA6AQ9NYA3 693 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 BRCA1P38398 1863 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 ARID2Q68CP9 1835 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 PGRMC1O00264 195 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 ADSSP30520 456 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 ZNF280AP59817 542 aaPredicted RBP20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 PAK2Q13177 524 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 DCAF12L1Q5VU92 463 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 LRRC31Q6UY01 552 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 ANO5Q75V66 913 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 MICALL2Q8IY33 904 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 GOLGA6L1Q8N7Z2 621 aa20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 CTDP1Q9Y5B0 961 aaPredicted RBP20.26■□□□□ 0.83
TSPAN4-210ENST00000464987 SART1O43290 800 aaKnown RBP20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 KRT14P02533 472 aa20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 ECHS1P30084 290 aa20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 NCKAP1LP55160 1127 aa20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 PSMC5P62195 406 aa20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 TNFAIP1Q13829 316 aa20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 LEKR1Q6ZMV7 388 aa20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 CBWD2Q8IUF1 395 aa20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 RASGEF1CQ8N431 466 aa20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 LMBR1Q8WVP7 490 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms