RNA–Protein interactions for RNA: ENST00000464833.1

CHRD-211, Transcript of chordin, humanhuman

TSL 5

Gene CHRD, Length 1,340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-211ENST00000464833 DHX58Q96C10 678 aa30.53■■■□□ 2.48
CHRD-211ENST00000464833 C2orf40Q9H1Z8 148 aa30.53■■■□□ 2.48
CHRD-211ENST00000464833 CUEDC2Q9H467 287 aa30.53■■■□□ 2.48
CHRD-211ENST00000464833 AGPAT5Q9NUQ2 364 aa30.53■■■□□ 2.48
CHRD-211ENST00000464833 KCNH3Q9ULD8 1083 aa30.53■■■□□ 2.48
CHRD-211ENST00000464833 DENND3A2RUS2 1198 aa30.52■■■□□ 2.48
CHRD-211ENST00000464833 SFI1A8K8P3 1242 aa30.52■■■□□ 2.48
CHRD-211ENST00000464833 POLR2DO15514 142 aaKnown RBP30.52■■■□□ 2.48
CHRD-211ENST00000464833 NPTX2P47972 431 aa30.52■■■□□ 2.48
CHRD-211ENST00000464833 PEX3P56589 373 aa30.52■■■□□ 2.48
CHRD-211ENST00000464833 AMHR2Q16671 573 aa30.52■■■□□ 2.48
CHRD-211ENST00000464833 CRIPAKQ8N1N5 446 aa30.52■■■□□ 2.48
CHRD-211ENST00000464833 DEPTORQ8TB45 409 aa30.52■■■□□ 2.48
CHRD-211ENST00000464833 TOP1MTQ969P6 601 aa30.52■■■□□ 2.48
CHRD-211ENST00000464833 KIFC3Q9BVG8 833 aa30.52■■■□□ 2.48
CHRD-211ENST00000464833 CHST12Q9NRB3 414 aa30.52■■■□□ 2.48
CHRD-211ENST00000464833 C1orf112Q9NSG2 853 aa30.52■■■□□ 2.48
CHRD-211ENST00000464833 HPSEQ9Y251 543 aa30.52■■■□□ 2.48
CHRD-211ENST00000464833 FAM237AA0A1B0GTK4 181 aa30.51■■■□□ 2.48
CHRD-211ENST00000464833 MYMKA6NI61 221 aa30.51■■■□□ 2.48
CHRD-211ENST00000464833 C9IYK1 514 aa30.51■■■□□ 2.48
CHRD-211ENST00000464833 GJB5O95377 273 aa30.51■■■□□ 2.48
CHRD-211ENST00000464833 PLS3P13797 630 aa30.51■■■□□ 2.48
CHRD-211ENST00000464833 PFKFB1P16118 471 aa30.51■■■□□ 2.48
CHRD-211ENST00000464833 ZNF131P52739 623 aa30.51■■■□□ 2.48
CHRD-211ENST00000464833 DMP1Q13316 513 aaPredicted RBP30.51■■■□□ 2.48
CHRD-211ENST00000464833 ZBTB8OSQ8IWT0 167 aa30.51■■■□□ 2.48
CHRD-211ENST00000464833 CCDC113Q9H0I3 377 aa30.51■■■□□ 2.48
CHRD-211ENST00000464833 KBTBD4Q9NVX7 518 aa30.51■■■□□ 2.48
CHRD-211ENST00000464833 A0A1B0GVL5 298 aa30.5■■■□□ 2.47
CHRD-211ENST00000464833 TSPAN1O60635 241 aa30.5■■■□□ 2.47
CHRD-211ENST00000464833 KRT18P05783 430 aaKnown RBP30.5■■■□□ 2.47
CHRD-211ENST00000464833 ZSCAN20P17040 1043 aaPredicted RBP30.5■■■□□ 2.47
CHRD-211ENST00000464833 HOXA11P31270 313 aaPredicted RBP30.5■■■□□ 2.47
CHRD-211ENST00000464833 RABGGTBP53611 331 aa30.5■■■□□ 2.47
CHRD-211ENST00000464833 PPP4R3CPQ6ZMV5 832 aa30.5■■■□□ 2.47
CHRD-211ENST00000464833 SLC24A5Q71RS6 500 aa30.5■■■□□ 2.47
CHRD-211ENST00000464833 SPIRE2Q8WWL2 714 aa30.5■■■□□ 2.47
CHRD-211ENST00000464833 PYM1Q9BRP8 204 aaKnown RBP30.5■■■□□ 2.47
CHRD-211ENST00000464833 NTPCRQ9BSD7 190 aaKnown RBP30.5■■■□□ 2.47
CHRD-211ENST00000464833 PBX4Q9BYU1 374 aa30.5■■■□□ 2.47
CHRD-211ENST00000464833 FZD8Q9H461 694 aa30.5■■■□□ 2.47
CHRD-211ENST00000464833 PIN4Q9Y237 131 aaKnown RBP30.5■■■□□ 2.47
CHRD-211ENST00000464833 ERLIN2O94905 339 aa30.49■■■□□ 2.47
CHRD-211ENST00000464833 PBX2P40425 430 aa30.49■■■□□ 2.47
CHRD-211ENST00000464833 SARSP49591 514 aaKnown RBP30.49■■■□□ 2.47
CHRD-211ENST00000464833 FAM189BP81408 668 aa30.49■■■□□ 2.47
CHRD-211ENST00000464833 FAM187BQ17R55 369 aa30.49■■■□□ 2.47
CHRD-211ENST00000464833 DDX12PQ92771 950 aa30.49■■■□□ 2.47
CHRD-211ENST00000464833 DNAJC19Q96DA6 116 aa30.49■■■□□ 2.47
CHRD-211ENST00000464833 LRCH3Q96II8 777 aa30.49■■■□□ 2.47
CHRD-211ENST00000464833 TNMDQ9H2S6 317 aa30.49■■■□□ 2.47
CHRD-211ENST00000464833 ARHGAP28Q9P2N2 729 aa30.49■■■□□ 2.47
CHRD-211ENST00000464833 PCDHA11Q9Y5I1 949 aa30.49■■■□□ 2.47
CHRD-211ENST00000464833 CCDC169A6NNP5 214 aa30.48■■■□□ 2.47
CHRD-211ENST00000464833 FXR1P51114 621 aaKnown RBP eCLIP30.48■■■□□ 2.47
CHRD-211ENST00000464833 EFNA5P52803 228 aa30.48■■■□□ 2.47
CHRD-211ENST00000464833 TRAIPQ9BWF2 469 aa30.48■■■□□ 2.47
CHRD-211ENST00000464833 MAGEF1Q9HAY2 307 aa30.48■■■□□ 2.47
CHRD-211ENST00000464833 KMT5AQ9NQR1 393 aa30.48■■■□□ 2.47
CHRD-211ENST00000464833 PRMT7Q9NVM4 692 aaPredicted RBP30.48■■■□□ 2.47
CHRD-211ENST00000464833 DACT1Q9NYF0 836 aa30.48■■■□□ 2.47
CHRD-211ENST00000464833 LARSQ9P2J5 1176 aaKnown RBP30.48■■■□□ 2.47
CHRD-211ENST00000464833 FAM13AO94988 1023 aa30.47■■■□□ 2.47
CHRD-211ENST00000464833 FAM117BQ6P1L5 589 aa30.47■■■□□ 2.47
CHRD-211ENST00000464833 DYMQ7RTS9 669 aa30.47■■■□□ 2.47
CHRD-211ENST00000464833 NPAS4Q8IUM7 802 aa30.47■■■□□ 2.47
CHRD-211ENST00000464833 FSIP1Q8NA03 581 aa30.47■■■□□ 2.47
CHRD-211ENST00000464833 MRPS27Q92552 414 aaKnown RBP30.47■■■□□ 2.47
CHRD-211ENST00000464833 PRIMPOLQ96LW4 560 aa30.47■■■□□ 2.47
CHRD-211ENST00000464833 PARVGQ9HBI0 331 aa30.47■■■□□ 2.47
CHRD-211ENST00000464833 KCNG1Q9UIX4 513 aa30.47■■■□□ 2.47
CHRD-211ENST00000464833 YBX2Q9Y2T7 364 aaKnown RBP30.47■■■□□ 2.47
CHRD-211ENST00000464833 B4GALT5O43286 388 aa30.47■■■□□ 2.47
CHRD-211ENST00000464833 TBCAO75347 108 aaKnown RBP30.47■■■□□ 2.47
CHRD-211ENST00000464833 UPP2O95045 317 aa30.47■■■□□ 2.47
CHRD-211ENST00000464833 DNAJB2P25686 324 aa30.47■■■□□ 2.47
CHRD-211ENST00000464833 AXLP30530 894 aa30.47■■■□□ 2.47
CHRD-211ENST00000464833 HTRA4P83105 476 aaPredicted RBP30.47■■■□□ 2.47
CHRD-211ENST00000464833 RAB30Q15771 203 aa30.47■■■□□ 2.47
CHRD-211ENST00000464833 MAPK6Q16659 721 aa30.47■■■□□ 2.47
CHRD-211ENST00000464833 STAMQ92783 540 aa30.47■■■□□ 2.47
CHRD-211ENST00000464833 GOLPH3LQ9H4A5 285 aa30.47■■■□□ 2.47
CHRD-211ENST00000464833 COL4A6Q14031 1691 aa30.46■■■□□ 2.47
CHRD-211ENST00000464833 CHD9Q3L8U1 2897 aa30.46■■■□□ 2.47
CHRD-211ENST00000464833 A0A0U1RQF3 1178 aa30.46■■■□□ 2.47
CHRD-211ENST00000464833 SLC16A4O15374 487 aa30.46■■■□□ 2.47
CHRD-211ENST00000464833 ACTN4O43707 911 aaKnown RBP30.46■■■□□ 2.47
CHRD-211ENST00000464833 PRKCBP05771 671 aa30.46■■■□□ 2.47
CHRD-211ENST00000464833 MYOGP15173 224 aa30.46■■■□□ 2.47
CHRD-211ENST00000464833 ARF4P18085 180 aaPredicted RBP30.46■■■□□ 2.47
CHRD-211ENST00000464833 NDUFA8P51970 172 aa30.46■■■□□ 2.47
CHRD-211ENST00000464833 TWF2Q6IBS0 349 aaKnown RBP30.46■■■□□ 2.47
CHRD-211ENST00000464833 TMEM161BQ8NDZ6 487 aa30.46■■■□□ 2.47
CHRD-211ENST00000464833 RAD9AQ99638 391 aa30.46■■■□□ 2.47
CHRD-211ENST00000464833 ZBED2Q9BTP6 218 aa30.46■■■□□ 2.47
CHRD-211ENST00000464833 TMEM134Q9H6X4 195 aa30.46■■■□□ 2.47
CHRD-211ENST00000464833 MSRAQ9UJ68 235 aa30.46■■■□□ 2.47
CHRD-211ENST00000464833 CNTNAP2Q9UHC6 1331 aa30.45■■■□□ 2.47
CHRD-211ENST00000464833 ACKR2O00590 384 aa30.45■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms