RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 HABP4Q5JVS0 413 aaKnown RBP9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 C9orf50Q5SZB4 431 aa9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 CDCA2Q69YH5 1023 aaPredicted RBP9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 TRAF7Q6Q0C0 670 aa9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 SASS6Q6UVJ0 657 aa9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 LRSAM1Q6UWE0 723 aa9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 SERINC5Q86VE9 423 aa9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 RHPN2Q8IUC4 686 aa9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 TMEM161BQ8NDZ6 487 aa9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 SCFD1Q8WVM8 642 aa9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 DNAJB3Q8WWF6 145 aa9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 PSPC1Q8WXF1 523 aaKnown RBP9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 NLRP4Q96MN2 994 aa9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 TOX2Q96NM4 488 aa9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 CCDC113Q9H0I3 377 aa9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 WNT8AQ9H1J5 351 aa9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 MINDY3Q9H8M7 445 aa9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 MRPL44Q9H9J2 332 aaKnown RBP9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 CDHR5Q9HBB8 845 aa9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 RMND1Q9NWS8 449 aa9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 SUCLA2Q9P2R7 463 aaPredicted RBP9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 SEL1LQ9UBV2 794 aa9.9□□□□□ -0.82
NUDCD3-204ENST00000464812 PDCD11Q14690 1871 aaKnown RBP9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 RALGAPA2Q2PPJ7 1873 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 TRIP11Q15643 1979 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 A0A087WZ62 844 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 TRIM49BA6NDI0 452 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 LRRIQ4A6NIV6 560 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 TTLL13PA6NNM8 815 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 TISP43B9A030 160 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 GPR32O75388 356 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 PRPF6O94906 941 aaKnown RBP9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 LETM1O95202 739 aaPredicted RBP9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 GCNT3O95395 438 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 MAPTP10636 758 aaKnown RBP9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 NAMPTP43490 491 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 PMS1P54277 932 aaKnown RBP9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 PTPN11Q06124 597 aaPredicted RBP9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 DMP1Q13316 513 aaPredicted RBP9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 PTGISQ16647 500 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 IER5Q5VY09 327 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 FAM178BQ8IXR5 827 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 ADSSL1Q8N142 457 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 RNF149Q8NC42 400 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 RETREG2Q8NC44 543 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 TMEM40Q8WWA1 233 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 SPIRE2Q8WWL2 714 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 TCP11Q8WWU5 503 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 BADQ92934 168 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 VTI1AQ96AJ9 217 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 FDXACB1Q9BRP7 624 aaPredicted RBP9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 IFT122Q9HBG6 1241 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 LARSQ9P2J5 1176 aaKnown RBP9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 ARHGAP28Q9P2N2 729 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 CTNND2Q9UQB3 1225 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 AKT3Q9Y243 479 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 USP20Q9Y2K6 914 aa9.89□□□□□ -0.83
NUDCD3-204ENST00000464812 PHLPP2Q6ZVD8 1323 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 CCDC169A6NNP5 214 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 CSDE1O75534 798 aaKnown RBP9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 CLTBP09497 229 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 CTSHP09668 335 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 IQCF3P0C7M6 154 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 CCDC192P0DO97 292 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 BMP8BP34820 402 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 FXR1P51114 621 aaKnown RBP eCLIP9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 NLRP11P59045 1033 aaKnown RBP9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 MBTD1Q05BQ5 628 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 MGAT3Q09327 533 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 PSMD2Q13200 908 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 MBTPS1Q14703 1052 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 BMT2Q1RMZ1 405 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 KIZQ2M2Z5 673 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 COBLL1Q53SF7 1204 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 KLHL10Q6JEL2 608 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 SLC39A4Q6P5W5 647 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 ZNF720Q7Z2F6 126 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 HAUS6Q7Z4H7 955 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 NELFCDQ8IXH7 590 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 SPOCK2Q92563 424 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 MAP7D2Q96T17 732 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 JPH2Q9BR39 696 aaPredicted RBP9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 NOC4LQ9BVI4 516 aaKnown RBP9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 ADAMTS10Q9H324 1103 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 KCTD10Q9H3F6 313 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 SEMA6BQ9H3T3 888 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 TSPY26PQ9H489 355 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 ST6GALNAC4Q9H4F1 302 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 C17orf75Q9HAS0 396 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 KMT5AQ9NQR1 393 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 PRDM5Q9NQX1 630 aaPredicted RBP9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 ANO10Q9NW15 660 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 NR2E3Q9Y5X4 410 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 MICAL3Q7RTP6 2002 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 CHD7Q9P2D1 2997 aa9.88□□□□□ -0.83
NUDCD3-204ENST00000464812 UBE4BO95155 1302 aa9.87□□□□□ -0.83
NUDCD3-204ENST00000464812 CITO14578 2027 aa9.87□□□□□ -0.83
NUDCD3-204ENST00000464812 DENND3A2RUS2 1198 aa9.87□□□□□ -0.83
NUDCD3-204ENST00000464812 EIF3DO15371 548 aaKnown RBP eCLIP9.87□□□□□ -0.83
NUDCD3-204ENST00000464812 SRGAP2CP0DJJ0 459 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms