RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 PIN4Q9Y237 131 aaKnown RBP19.44■□□□□ 0.7
HMGN1-210ENST00000464078 DMDP11532 3685 aa19.44■□□□□ 0.7
HMGN1-210ENST00000464078 CYP3A7-CYP3A51PA0A087WV96 503 aa19.43■□□□□ 0.7
HMGN1-210ENST00000464078 A0A087WZ62 844 aa19.43■□□□□ 0.7
HMGN1-210ENST00000464078 MAFO75444 373 aaPredicted RBP19.43■□□□□ 0.7
HMGN1-210ENST00000464078 ASGR2P07307 311 aa19.43■□□□□ 0.7
HMGN1-210ENST00000464078 GALTP07902 379 aa19.43■□□□□ 0.7
HMGN1-210ENST00000464078 WEE2P0C1S8 567 aa19.43■□□□□ 0.7
HMGN1-210ENST00000464078 CYP3A7P24462 503 aa19.43■□□□□ 0.7
HMGN1-210ENST00000464078 CA8P35219 290 aa19.43■□□□□ 0.7
HMGN1-210ENST00000464078 EVCP57679 992 aa19.43■□□□□ 0.7
HMGN1-210ENST00000464078 PTPN14Q15678 1187 aa19.43■□□□□ 0.7
HMGN1-210ENST00000464078 MTERF2Q49AM1 385 aa19.43■□□□□ 0.7
HMGN1-210ENST00000464078 ASTLQ6HA08 431 aaPredicted RBP19.43■□□□□ 0.7
HMGN1-210ENST00000464078 BLOC1S2Q6QNY1 142 aa19.43■□□□□ 0.7
HMGN1-210ENST00000464078 MIER3Q7Z3K6 550 aa19.43■□□□□ 0.7
HMGN1-210ENST00000464078 PPFIBP1Q86W92 1011 aa19.43■□□□□ 0.7
HMGN1-210ENST00000464078 C12orf76Q8N812 135 aaPredicted RBP19.43■□□□□ 0.7
HMGN1-210ENST00000464078 AUTS2Q8WXX7 1259 aa19.43■□□□□ 0.7
HMGN1-210ENST00000464078 LPPQ93052 612 aa19.43■□□□□ 0.7
HMGN1-210ENST00000464078 FDXACB1Q9BRP7 624 aaPredicted RBP19.43■□□□□ 0.7
HMGN1-210ENST00000464078 VN1R3Q9BXE9 311 aa19.43■□□□□ 0.7
HMGN1-210ENST00000464078 SMOC2Q9H3U7 446 aa19.43■□□□□ 0.7
HMGN1-210ENST00000464078 NRDE2Q9H7Z3 1164 aa19.43■□□□□ 0.7
HMGN1-210ENST00000464078 SFXN1Q9H9B4 322 aa19.43■□□□□ 0.7
HMGN1-210ENST00000464078 DBR1Q9UK59 544 aaKnown RBP19.43■□□□□ 0.7
HMGN1-210ENST00000464078 HSPA4P34932 840 aa19.42■□□□□ 0.7
HMGN1-210ENST00000464078 CLCN5P51795 746 aa19.42■□□□□ 0.7
HMGN1-210ENST00000464078 MOXD1Q6UVY6 613 aa19.42■□□□□ 0.7
HMGN1-210ENST00000464078 TMEM87AQ8NBN3 555 aa19.42■□□□□ 0.7
HMGN1-210ENST00000464078 TBCKQ8TEA7 893 aa19.42■□□□□ 0.7
HMGN1-210ENST00000464078 GJA10Q969M2 543 aa19.42■□□□□ 0.7
HMGN1-210ENST00000464078 MBOAT7Q96N66 472 aa19.42■□□□□ 0.7
HMGN1-210ENST00000464078 SLC26A6Q9BXS9 759 aa19.42■□□□□ 0.7
HMGN1-210ENST00000464078 CYP26B1Q9NR63 512 aa19.42■□□□□ 0.7
HMGN1-210ENST00000464078 C2orf16Q68DN1 1984 aa19.42■□□□□ 0.7
HMGN1-210ENST00000464078 TMEM150BA6NC51 233 aa19.41■□□□□ 0.7
HMGN1-210ENST00000464078 PRR23AA6NEV1 266 aa19.41■□□□□ 0.7
HMGN1-210ENST00000464078 MEIS3P2A8K0S8 358 aa19.41■□□□□ 0.7
HMGN1-210ENST00000464078 OFD1O75665 1012 aa19.41■□□□□ 0.7
HMGN1-210ENST00000464078 RPS6KB1P23443 525 aa19.41■□□□□ 0.7
HMGN1-210ENST00000464078 GPR149Q86SP6 731 aa19.41■□□□□ 0.7
HMGN1-210ENST00000464078 CABP7Q86V35 215 aa19.41■□□□□ 0.7
HMGN1-210ENST00000464078 RHPN2Q8IUC4 686 aa19.41■□□□□ 0.7
HMGN1-210ENST00000464078 FAM177A1Q8N128 213 aaPredicted RBP19.41■□□□□ 0.7
HMGN1-210ENST00000464078 ETNPPLQ8TBG4 499 aa19.41■□□□□ 0.7
HMGN1-210ENST00000464078 JPH2Q9BR39 696 aaPredicted RBP19.41■□□□□ 0.7
HMGN1-210ENST00000464078 AGPAT5Q9NUQ2 364 aa19.41■□□□□ 0.7
HMGN1-210ENST00000464078 SUCLA2Q9P2R7 463 aaPredicted RBP19.41■□□□□ 0.7
HMGN1-210ENST00000464078 DNAJB4Q9UDY4 337 aa19.41■□□□□ 0.7
HMGN1-210ENST00000464078 LIMD1Q9UGP4 676 aa19.41■□□□□ 0.7
HMGN1-210ENST00000464078 SNX14Q9Y5W7 946 aa19.41■□□□□ 0.7
HMGN1-210ENST00000464078 B4GALT3O60512 393 aa19.4■□□□□ 0.7
HMGN1-210ENST00000464078 TDP2O95551 362 aa19.4■□□□□ 0.7
HMGN1-210ENST00000464078 SLC11A1P49279 550 aa19.4■□□□□ 0.7
HMGN1-210ENST00000464078 RNASELQ05823 741 aaKnown RBP19.4■□□□□ 0.7
HMGN1-210ENST00000464078 KANK3Q6NY19 840 aa19.4■□□□□ 0.7
HMGN1-210ENST00000464078 CCDC149Q6ZUS6 474 aa19.4■□□□□ 0.7
HMGN1-210ENST00000464078 ANO5Q75V66 913 aa19.4■□□□□ 0.7
HMGN1-210ENST00000464078 OTOP3Q7RTS5 596 aa19.4■□□□□ 0.7
HMGN1-210ENST00000464078 CATSPER4Q7RTX7 472 aa19.4■□□□□ 0.7
HMGN1-210ENST00000464078 ACSF2Q96CM8 615 aaPredicted RBP19.4■□□□□ 0.7
HMGN1-210ENST00000464078 PGBD4Q96DM1 585 aa19.4■□□□□ 0.7
HMGN1-210ENST00000464078 IFT122Q9HBG6 1241 aa19.4■□□□□ 0.7
HMGN1-210ENST00000464078 PCDHA4Q9UN74 947 aa19.4■□□□□ 0.7
HMGN1-210ENST00000464078 INPP5FQ9Y2H2 1132 aa19.4■□□□□ 0.7
HMGN1-210ENST00000464078 M0R2N6 131 aa19.39■□□□□ 0.69
HMGN1-210ENST00000464078 PDIA3P30101 505 aaKnown RBP19.39■□□□□ 0.69
HMGN1-210ENST00000464078 NLRP5P59047 1200 aa19.39■□□□□ 0.69
HMGN1-210ENST00000464078 FOXK2Q01167 660 aa19.39■□□□□ 0.69
HMGN1-210ENST00000464078 CWF19L1Q69YN2 538 aaKnown RBP19.39■□□□□ 0.69
HMGN1-210ENST00000464078 TMC5Q6UXY8 1006 aa19.39■□□□□ 0.69
HMGN1-210ENST00000464078 C15orf39Q6ZRI6 1047 aa19.39■□□□□ 0.69
HMGN1-210ENST00000464078 CENPQQ7L2Z9 268 aaPredicted RBP19.39■□□□□ 0.69
HMGN1-210ENST00000464078 ASCL5Q7RTU5 278 aa19.39■□□□□ 0.69
HMGN1-210ENST00000464078 MRPL10Q7Z7H8 261 aaKnown RBP19.39■□□□□ 0.69
HMGN1-210ENST00000464078 SKAP1Q86WV1 359 aa19.39■□□□□ 0.69
HMGN1-210ENST00000464078 DAGLBQ8NCG7 672 aa19.39■□□□□ 0.69
HMGN1-210ENST00000464078 URGCPQ8TCY9 931 aa19.39■□□□□ 0.69
HMGN1-210ENST00000464078 SH2D3AQ9BRG2 576 aa19.39■□□□□ 0.69
HMGN1-210ENST00000464078 EMILIN2Q9BXX0 1053 aa19.39■□□□□ 0.69
HMGN1-210ENST00000464078 MFSD1Q9H3U5 465 aa19.39■□□□□ 0.69
HMGN1-210ENST00000464078 PPME1Q9Y570 386 aa19.39■□□□□ 0.69
HMGN1-210ENST00000464078 PCDHB2Q9Y5E7 798 aa19.39■□□□□ 0.69
HMGN1-210ENST00000464078 CNTNAP2Q9UHC6 1331 aa19.39■□□□□ 0.69
HMGN1-210ENST00000464078 LILRB3O75022 631 aa19.38■□□□□ 0.69
HMGN1-210ENST00000464078 CLCN4P51793 760 aa19.38■□□□□ 0.69
HMGN1-210ENST00000464078 PSMC5P62195 406 aa19.38■□□□□ 0.69
HMGN1-210ENST00000464078 LONRF3Q496Y0 759 aa19.38■□□□□ 0.69
HMGN1-210ENST00000464078 AGMOQ6ZNB7 445 aa19.38■□□□□ 0.69
HMGN1-210ENST00000464078 ZNF280BQ86YH2 543 aa19.38■□□□□ 0.69
HMGN1-210ENST00000464078 KSR1Q8IVT5 923 aa19.38■□□□□ 0.69
HMGN1-210ENST00000464078 TRIM22Q8IYM9 498 aa19.38■□□□□ 0.69
HMGN1-210ENST00000464078 NLRP4Q96MN2 994 aa19.38■□□□□ 0.69
HMGN1-210ENST00000464078 TMEM175Q9BSA9 504 aa19.38■□□□□ 0.69
HMGN1-210ENST00000464078 RHOBTB2Q9BYZ6 727 aa19.38■□□□□ 0.69
HMGN1-210ENST00000464078 NCOA5Q9HCD5 579 aaKnown RBP19.38■□□□□ 0.69
HMGN1-210ENST00000464078 COL4A3BPQ9Y5P4 624 aa19.38■□□□□ 0.69
HMGN1-210ENST00000464078 EP300Q09472 2414 aaPredicted RBP19.37■□□□□ 0.69
HMGN1-210ENST00000464078 DDX11L8A8MPP1 907 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms