RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 EPCAMP16422 314 aa17.18■□□□□ 0.34
CMSS1-202ENST00000463526 NPEPPSP55786 919 aa17.18■□□□□ 0.34
CMSS1-202ENST00000463526 PSMC5P62195 406 aa17.18■□□□□ 0.34
CMSS1-202ENST00000463526 NONOQ15233 471 aaKnown RBP eCLIP17.18■□□□□ 0.347e-9■■□□□ 12.4
CMSS1-202ENST00000463526 LETM2Q2VYF4 491 aa17.18■□□□□ 0.34
CMSS1-202ENST00000463526 B3GNT9Q6UX72 402 aa17.18■□□□□ 0.34
CMSS1-202ENST00000463526 ANO5Q75V66 913 aa17.18■□□□□ 0.34
CMSS1-202ENST00000463526 ZNF410Q86VK4 478 aa17.18■□□□□ 0.34
CMSS1-202ENST00000463526 ETNPPLQ8TBG4 499 aa17.18■□□□□ 0.34
CMSS1-202ENST00000463526 BCL7CQ8WUZ0 217 aaPredicted RBP17.18■□□□□ 0.34
CMSS1-202ENST00000463526 IGSF21Q96ID5 467 aa17.18■□□□□ 0.34
CMSS1-202ENST00000463526 RIPOR3Q96MK2 946 aa17.18■□□□□ 0.34
CMSS1-202ENST00000463526 NECTIN4Q96NY8 510 aa17.18■□□□□ 0.34
CMSS1-202ENST00000463526 ZBP1Q9H171 429 aa17.18■□□□□ 0.34
CMSS1-202ENST00000463526 SMOC2Q9H3U7 446 aa17.18■□□□□ 0.34
CMSS1-202ENST00000463526 BMP2KQ9NSY1 1161 aaPredicted RBP17.18■□□□□ 0.34
CMSS1-202ENST00000463526 KCNJ14Q9UNX9 436 aa17.18■□□□□ 0.34
CMSS1-202ENST00000463526 CYP46A1Q9Y6A2 500 aa17.18■□□□□ 0.34
CMSS1-202ENST00000463526 M0R2N6 131 aa17.17■□□□□ 0.34
CMSS1-202ENST00000463526 SLC37A4O43826 429 aa17.17■□□□□ 0.34
CMSS1-202ENST00000463526 DTNBO60941 627 aa17.17■□□□□ 0.34
CMSS1-202ENST00000463526 OFD1O75665 1012 aa17.17■□□□□ 0.34
CMSS1-202ENST00000463526 SSBP05455 408 aaKnown RBP eCLIP17.17■□□□□ 0.34
CMSS1-202ENST00000463526 ASGR2P07307 311 aa17.17■□□□□ 0.34
CMSS1-202ENST00000463526 SKIP12755 728 aa17.17■□□□□ 0.34
CMSS1-202ENST00000463526 MTHFRP42898 656 aa17.17■□□□□ 0.34
CMSS1-202ENST00000463526 SLC11A1P49279 550 aa17.17■□□□□ 0.34
CMSS1-202ENST00000463526 DDX53Q86TM3 631 aaKnown RBP17.17■□□□□ 0.34
CMSS1-202ENST00000463526 ZNF579Q8NAF0 562 aaKnown RBP17.17■□□□□ 0.34
CMSS1-202ENST00000463526 FEZF2Q8TBJ5 459 aa17.17■□□□□ 0.34
CMSS1-202ENST00000463526 ATOH1Q92858 354 aaPredicted RBP17.17■□□□□ 0.34
CMSS1-202ENST00000463526 ZSWIM6Q9HCJ5 1215 aa17.17■□□□□ 0.34
CMSS1-202ENST00000463526 DNAJB4Q9UDY4 337 aa17.17■□□□□ 0.34
CMSS1-202ENST00000463526 LIMD1Q9UGP4 676 aa17.17■□□□□ 0.34
CMSS1-202ENST00000463526 DBR1Q9UK59 544 aaKnown RBP17.17■□□□□ 0.34
CMSS1-202ENST00000463526 SPDYE4A6NLX3 237 aa17.16■□□□□ 0.34
CMSS1-202ENST00000463526 BRD1O95696 1058 aa17.16■□□□□ 0.34
CMSS1-202ENST00000463526 SRGAP2CP0DJJ0 459 aa17.16■□□□□ 0.34
CMSS1-202ENST00000463526 CTSAP10619 480 aa17.16■□□□□ 0.34
CMSS1-202ENST00000463526 MTMR3Q13615 1198 aa17.16■□□□□ 0.34
CMSS1-202ENST00000463526 NPY5RQ15761 445 aa17.16■□□□□ 0.34
CMSS1-202ENST00000463526 ATAT1Q5SQI0 421 aa17.16■□□□□ 0.34
CMSS1-202ENST00000463526 CPLX2Q6PUV4 134 aaKnown RBP17.16■□□□□ 0.34
CMSS1-202ENST00000463526 TMC5Q6UXY8 1006 aa17.16■□□□□ 0.34
CMSS1-202ENST00000463526 KRT25Q7Z3Z0 450 aa17.16■□□□□ 0.34
CMSS1-202ENST00000463526 ZNF280BQ86YH2 543 aa17.16■□□□□ 0.34
CMSS1-202ENST00000463526 TMEM143Q96AN5 459 aa17.16■□□□□ 0.34
CMSS1-202ENST00000463526 CEP170P1Q96L14 293 aa17.16■□□□□ 0.34
CMSS1-202ENST00000463526 MBOAT7Q96N66 472 aa17.16■□□□□ 0.34
CMSS1-202ENST00000463526 CYP26B1Q9NR63 512 aa17.16■□□□□ 0.34
CMSS1-202ENST00000463526 SORCS3Q9UPU3 1222 aa17.16■□□□□ 0.34
CMSS1-202ENST00000463526 PCDHB2Q9Y5E7 798 aa17.16■□□□□ 0.34
CMSS1-202ENST00000463526 COL4A3BPQ9Y5P4 624 aa17.16■□□□□ 0.34
CMSS1-202ENST00000463526 WDR81Q562E7 1941 aa17.15■□□□□ 0.34
CMSS1-202ENST00000463526 CCDC194A0A1B0GVG4 234 aa17.15■□□□□ 0.34
CMSS1-202ENST00000463526 H0Y858 1186 aa17.15■□□□□ 0.34
CMSS1-202ENST00000463526 MARCH6O60337 910 aa17.15■□□□□ 0.34
CMSS1-202ENST00000463526 B4GALT3O60512 393 aa17.15■□□□□ 0.34
CMSS1-202ENST00000463526 QARSP47897 775 aaKnown RBP17.15■□□□□ 0.34
CMSS1-202ENST00000463526 RAB27AP51159 221 aa17.15■□□□□ 0.34
CMSS1-202ENST00000463526 POLGP54098 1239 aaPredicted RBP17.15■□□□□ 0.34
CMSS1-202ENST00000463526 MOXD1Q6UVY6 613 aa17.15■□□□□ 0.34
CMSS1-202ENST00000463526 CABP7Q86V35 215 aa17.15■□□□□ 0.34
CMSS1-202ENST00000463526 TDRD5Q8NAT2 981 aaKnown RBP17.15■□□□□ 0.34
CMSS1-202ENST00000463526 DAGLBQ8NCG7 672 aa17.15■□□□□ 0.34
CMSS1-202ENST00000463526 URGCPQ8TCY9 931 aa17.15■□□□□ 0.34
CMSS1-202ENST00000463526 SLC22A17Q8WUG5 538 aa17.15■□□□□ 0.34
CMSS1-202ENST00000463526 PGBD4Q96DM1 585 aa17.15■□□□□ 0.34
CMSS1-202ENST00000463526 ZNF274Q96GC6 653 aaPredicted RBP17.15■□□□□ 0.34
CMSS1-202ENST00000463526 JPH2Q9BR39 696 aaPredicted RBP17.15■□□□□ 0.34
CMSS1-202ENST00000463526 TRAIPQ9BWF2 469 aa17.15■□□□□ 0.34
CMSS1-202ENST00000463526 IFT122Q9HBG6 1241 aa17.15■□□□□ 0.34
CMSS1-202ENST00000463526 DZANK1Q9NVP4 752 aa17.15■□□□□ 0.34
CMSS1-202ENST00000463526 ZNF623O75123 536 aa17.14■□□□□ 0.33
CMSS1-202ENST00000463526 DDHD2O94830 711 aa17.14■□□□□ 0.33
CMSS1-202ENST00000463526 AFF1P51825 1210 aaKnown RBP17.14■□□□□ 0.33
CMSS1-202ENST00000463526 GALNT17Q6IS24 598 aa17.14■□□□□ 0.33
CMSS1-202ENST00000463526 AGMOQ6ZNB7 445 aa17.14■□□□□ 0.33
CMSS1-202ENST00000463526 UBALD2Q8IYN6 164 aa17.14■□□□□ 0.33
CMSS1-202ENST00000463526 PRPF31Q8WWY3 499 aaKnown RBP17.14■□□□□ 0.33
CMSS1-202ENST00000463526 SLC7A3Q8WY07 619 aa17.14■□□□□ 0.33
CMSS1-202ENST00000463526 FAM193BQ96PV7 902 aaPredicted RBP17.14■□□□□ 0.33
CMSS1-202ENST00000463526 VN1R3Q9BXE9 311 aa17.14■□□□□ 0.33
CMSS1-202ENST00000463526 MINDY3Q9H8M7 445 aa17.14■□□□□ 0.33
CMSS1-202ENST00000463526 WRAP73Q9P2S5 460 aaPredicted RBP17.14■□□□□ 0.33
CMSS1-202ENST00000463526 VAV3Q9UKW4 847 aa17.14■□□□□ 0.33
CMSS1-202ENST00000463526 MYO10Q9HD67 2058 aa17.14■□□□□ 0.33
CMSS1-202ENST00000463526 POMCP01189 267 aa17.13■□□□□ 0.33
CMSS1-202ENST00000463526 P4HBP07237 508 aaKnown RBP17.13■□□□□ 0.33
CMSS1-202ENST00000463526 KLRC2P26717 231 aa17.13■□□□□ 0.33
CMSS1-202ENST00000463526 GIT2Q14161 759 aa17.13■□□□□ 0.33
CMSS1-202ENST00000463526 PTPN14Q15678 1187 aa17.13■□□□□ 0.33
CMSS1-202ENST00000463526 KIAA1841Q6NSI8 718 aa17.13■□□□□ 0.33
CMSS1-202ENST00000463526 PSPC1Q8WXF1 523 aaKnown RBP17.13■□□□□ 0.33
CMSS1-202ENST00000463526 RSAD1Q9HA92 442 aa17.13■□□□□ 0.33
CMSS1-202ENST00000463526 GJB4Q9NTQ9 266 aa17.13■□□□□ 0.33
CMSS1-202ENST00000463526 PDRG1Q9NUG6 133 aa17.13■□□□□ 0.33
CMSS1-202ENST00000463526 AGPAT5Q9NUQ2 364 aa17.13■□□□□ 0.33
CMSS1-202ENST00000463526 FAN1Q9Y2M0 1017 aa17.13■□□□□ 0.33
CMSS1-202ENST00000463526 IRAK3Q9Y616 596 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms