RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 USP20Q9Y2K6 914 aa22.38■■□□□ 1.17
NUP43-205ENST00000463048 SLC4A7Q9Y6M7 1214 aa22.38■■□□□ 1.17
NUP43-205ENST00000463048 ABHD14A-ACY1A0A1B0GW23 586 aa22.37■■□□□ 1.17
NUP43-205ENST00000463048 DENND3A2RUS2 1198 aa22.37■■□□□ 1.17
NUP43-205ENST00000463048 ERLIN2O94905 339 aa22.37■■□□□ 1.17
NUP43-205ENST00000463048 PLS3P13797 630 aa22.37■■□□□ 1.17
NUP43-205ENST00000463048 WDR5P61964 334 aaKnown RBP22.37■■□□□ 1.17
NUP43-205ENST00000463048 MBTD1Q05BQ5 628 aa22.37■■□□□ 1.17
NUP43-205ENST00000463048 ODR4Q5SWX8 454 aa22.37■■□□□ 1.17
NUP43-205ENST00000463048 LINC01599Q8WXQ3 324 aa22.37■■□□□ 1.17
NUP43-205ENST00000463048 CPB2Q96IY4 423 aa22.37■■□□□ 1.17
NUP43-205ENST00000463048 ADAM2Q99965 735 aa22.37■■□□□ 1.17
NUP43-205ENST00000463048 MTIF3Q9H2K0 278 aaKnown RBP22.37■■□□□ 1.17
NUP43-205ENST00000463048 TNMDQ9H2S6 317 aa22.37■■□□□ 1.17
NUP43-205ENST00000463048 TBC1D7Q9P0N9 293 aa22.37■■□□□ 1.17
NUP43-205ENST00000463048 ODF2LQ9ULJ1 636 aa22.37■■□□□ 1.17
NUP43-205ENST00000463048 PIN4Q9Y237 131 aaKnown RBP22.37■■□□□ 1.17
NUP43-205ENST00000463048 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.36■■□□□ 1.17
NUP43-205ENST00000463048 GRXCR1A8MXD5 290 aa22.36■■□□□ 1.17
NUP43-205ENST00000463048 BAIAP3O94812 1187 aa22.36■■□□□ 1.17
NUP43-205ENST00000463048 UPP2O95045 317 aa22.36■■□□□ 1.17
NUP43-205ENST00000463048 ZNF202O95125 648 aa22.36■■□□□ 1.17
NUP43-205ENST00000463048 ASIC1P78348 528 aa22.36■■□□□ 1.17
NUP43-205ENST00000463048 TMEM132AQ24JP5 1023 aa22.36■■□□□ 1.17
NUP43-205ENST00000463048 FAM109BQ6ICB4 259 aaPredicted RBP22.36■■□□□ 1.17
NUP43-205ENST00000463048 RTN4RL1Q86UN2 441 aaPredicted RBP22.36■■□□□ 1.17
NUP43-205ENST00000463048 MYOCDQ8IZQ8 938 aa22.36■■□□□ 1.17
NUP43-205ENST00000463048 DNAJC19Q96DA6 116 aa22.36■■□□□ 1.17
NUP43-205ENST00000463048 PYM1Q9BRP8 204 aaKnown RBP22.36■■□□□ 1.17
NUP43-205ENST00000463048 PARVGQ9HBI0 331 aa22.36■■□□□ 1.17
NUP43-205ENST00000463048 KBTBD4Q9NVX7 518 aa22.36■■□□□ 1.17
NUP43-205ENST00000463048 MICAL3Q7RTP6 2002 aa22.35■■□□□ 1.17
NUP43-205ENST00000463048 FAM237AA0A1B0GTK4 181 aa22.35■■□□□ 1.17
NUP43-205ENST00000463048 ENPP3O14638 875 aa22.35■■□□□ 1.17
NUP43-205ENST00000463048 B4GALT5O43286 388 aa22.35■■□□□ 1.17
NUP43-205ENST00000463048 SLFN14P0C7P3 912 aa22.35■■□□□ 1.17
NUP43-205ENST00000463048 ZSCAN20P17040 1043 aaPredicted RBP22.35■■□□□ 1.17
NUP43-205ENST00000463048 AMPD3Q01432 767 aa22.35■■□□□ 1.17
NUP43-205ENST00000463048 CDCA2Q69YH5 1023 aaPredicted RBP22.35■■□□□ 1.17
NUP43-205ENST00000463048 CDR2LQ86X02 465 aaPredicted RBP22.35■■□□□ 1.17
NUP43-205ENST00000463048 SFR1Q86XK3 245 aa22.35■■□□□ 1.17
NUP43-205ENST00000463048 CNNM3Q8NE01 707 aa22.35■■□□□ 1.17
NUP43-205ENST00000463048 PAGE5Q96GU1 130 aa22.35■■□□□ 1.17
NUP43-205ENST00000463048 C2orf40Q9H1Z8 148 aa22.35■■□□□ 1.17
NUP43-205ENST00000463048 LARSQ9P2J5 1176 aaKnown RBP22.35■■□□□ 1.17
NUP43-205ENST00000463048 TSPAN1O60635 241 aa22.34■■□□□ 1.17
NUP43-205ENST00000463048 AMHP03971 560 aa22.34■■□□□ 1.17
NUP43-205ENST00000463048 PRKCBP05771 671 aa22.34■■□□□ 1.17
NUP43-205ENST00000463048 SMTNP53814 917 aa22.34■■□□□ 1.17
NUP43-205ENST00000463048 POU5F1BQ06416 359 aa22.34■■□□□ 1.17
NUP43-205ENST00000463048 CUL4BQ13620 913 aa22.34■■□□□ 1.17
NUP43-205ENST00000463048 TMEM87AQ8NBN3 555 aa22.34■■□□□ 1.17
NUP43-205ENST00000463048 FTHL17Q9BXU8 183 aa22.34■■□□□ 1.17
NUP43-205ENST00000463048 TRIM9Q9C026 710 aa22.34■■□□□ 1.17
NUP43-205ENST00000463048 LRRC27Q9C0I9 530 aa22.34■■□□□ 1.17
NUP43-205ENST00000463048 MAGEF1Q9HAY2 307 aa22.34■■□□□ 1.17
NUP43-205ENST00000463048 PANK4Q9NVE7 773 aa22.34■■□□□ 1.17
NUP43-205ENST00000463048 TTLL13PA6NNM8 815 aa22.33■■□□□ 1.17
NUP43-205ENST00000463048 K7ENM7 598 aa22.33■■□□□ 1.17
NUP43-205ENST00000463048 K7ERI5 159 aa22.33■■□□□ 1.17
NUP43-205ENST00000463048 TRAK2O60296 914 aa22.33■■□□□ 1.17
NUP43-205ENST00000463048 EDN1P05305 212 aa22.33■■□□□ 1.17
NUP43-205ENST00000463048 ATP2A2P16615 1042 aaKnown RBP22.33■■□□□ 1.17
NUP43-205ENST00000463048 NMT1P30419 496 aaKnown RBP22.33■■□□□ 1.17
NUP43-205ENST00000463048 RABGGTBP53611 331 aa22.33■■□□□ 1.17
NUP43-205ENST00000463048 RASIP1Q5U651 963 aa22.33■■□□□ 1.17
NUP43-205ENST00000463048 TWF2Q6IBS0 349 aaKnown RBP22.33■■□□□ 1.17
NUP43-205ENST00000463048 KRBA2Q6ZNG9 492 aa22.33■■□□□ 1.17
NUP43-205ENST00000463048 IFNLR1Q8IU57 520 aaPredicted RBP22.33■■□□□ 1.17
NUP43-205ENST00000463048 FMR1NBQ8N0W7 255 aaPredicted RBP22.33■■□□□ 1.17
NUP43-205ENST00000463048 RNF169Q8NCN4 708 aa22.33■■□□□ 1.17
NUP43-205ENST00000463048 HPS3Q969F9 1004 aa22.33■■□□□ 1.17
NUP43-205ENST00000463048 GBP4Q96PP9 640 aa22.33■■□□□ 1.17
NUP43-205ENST00000463048 NFKBIZQ9BYH8 718 aa22.33■■□□□ 1.17
NUP43-205ENST00000463048 C17orf75Q9HAS0 396 aa22.33■■□□□ 1.17
NUP43-205ENST00000463048 PTPRSQ13332 1948 aa22.32■■□□□ 1.16
NUP43-205ENST00000463048 EFCAB14O75071 495 aa22.32■■□□□ 1.16
NUP43-205ENST00000463048 NR1I2O75469 434 aa22.32■■□□□ 1.16
NUP43-205ENST00000463048 PRR29P0C7W0 189 aa22.32■■□□□ 1.16
NUP43-205ENST00000463048 ZNF131P52739 623 aa22.32■■□□□ 1.16
NUP43-205ENST00000463048 FAM160A1Q05DH4 1040 aa22.32■■□□□ 1.16
NUP43-205ENST00000463048 DSC3Q14574 896 aa22.32■■□□□ 1.16
NUP43-205ENST00000463048 MAPK6Q16659 721 aa22.32■■□□□ 1.16
NUP43-205ENST00000463048 AMHR2Q16671 573 aa22.32■■□□□ 1.16
NUP43-205ENST00000463048 HERC4Q5GLZ8 1057 aaPredicted RBP22.32■■□□□ 1.16
NUP43-205ENST00000463048 FAM178BQ8IXR5 827 aa22.32■■□□□ 1.16
NUP43-205ENST00000463048 C7orf25Q9BPX7 421 aa22.32■■□□□ 1.16
NUP43-205ENST00000463048 CCDC113Q9H0I3 377 aa22.32■■□□□ 1.16
NUP43-205ENST00000463048 TSPYL2Q9H2G4 693 aaPredicted RBP22.32■■□□□ 1.16
NUP43-205ENST00000463048 AGPAT5Q9NUQ2 364 aa22.32■■□□□ 1.16
NUP43-205ENST00000463048 PRMT7Q9NVM4 692 aaPredicted RBP22.32■■□□□ 1.16
NUP43-205ENST00000463048 USP25Q9UHP3 1055 aa22.32■■□□□ 1.16
NUP43-205ENST00000463048 ARF4P18085 180 aaPredicted RBP22.31■■□□□ 1.16
NUP43-205ENST00000463048 EFNA5P52803 228 aa22.31■■□□□ 1.16
NUP43-205ENST00000463048 NCBP1Q09161 790 aaKnown RBP22.31■■□□□ 1.16
NUP43-205ENST00000463048 PRPF4BQ13523 1007 aaKnown RBP22.31■■□□□ 1.16
NUP43-205ENST00000463048 SNW1Q13573 536 aaKnown RBP22.31■■□□□ 1.16
NUP43-205ENST00000463048 TAS1R3Q7RTX0 852 aa22.31■■□□□ 1.16
NUP43-205ENST00000463048 HAUS6Q7Z4H7 955 aa22.31■■□□□ 1.16
NUP43-205ENST00000463048 CCDC65Q8IXS2 484 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms