RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 SPTBN5Q9NRC6 3674 aaKnown RBP9.87□□□□□ -0.83
LDB1-203ENST00000461873 IGKV6-21A0A0C4DH24 114 aa9.87□□□□□ -0.83
LDB1-203ENST00000461873 RBAK-RBAKDNI3L0D1 243 aa9.87□□□□□ -0.83
LDB1-203ENST00000461873 INO80B-WBP1J3KQ70 363 aa9.87□□□□□ -0.83
LDB1-203ENST00000461873 ZC3H11AO75152 810 aaKnown RBP eCLIP9.87□□□□□ -0.83
LDB1-203ENST00000461873 FDPSP14324 419 aaKnown RBP9.87□□□□□ -0.83
LDB1-203ENST00000461873 COL9A1P20849 921 aa9.87□□□□□ -0.83
LDB1-203ENST00000461873 AXLP30530 894 aa9.87□□□□□ -0.83
LDB1-203ENST00000461873 PLCB3Q01970 1234 aa9.87□□□□□ -0.83
LDB1-203ENST00000461873 LAMTOR4Q0VGL1 99 aa9.87□□□□□ -0.83
LDB1-203ENST00000461873 ORC2Q13416 577 aaPredicted RBP9.87□□□□□ -0.83
LDB1-203ENST00000461873 DRP2Q13474 957 aa9.87□□□□□ -0.83
LDB1-203ENST00000461873 GIT2Q14161 759 aa9.87□□□□□ -0.83
LDB1-203ENST00000461873 DSC3Q14574 896 aa9.87□□□□□ -0.83
LDB1-203ENST00000461873 SMC1AQ14683 1233 aaKnown RBP9.87□□□□□ -0.83
LDB1-203ENST00000461873 LONRF3Q496Y0 759 aa9.87□□□□□ -0.83
LDB1-203ENST00000461873 ELMSAN1Q6PJG2 1045 aa9.87□□□□□ -0.83
LDB1-203ENST00000461873 B3GNT9Q6UX72 402 aa9.87□□□□□ -0.83
LDB1-203ENST00000461873 KSR1Q8IVT5 923 aa9.87□□□□□ -0.83
LDB1-203ENST00000461873 ZBTB8OSQ8IWT0 167 aa9.87□□□□□ -0.83
LDB1-203ENST00000461873 LINC01465Q8N7H1 131 aa9.87□□□□□ -0.83
LDB1-203ENST00000461873 PRPF31Q8WWY3 499 aaKnown RBP9.87□□□□□ -0.83
LDB1-203ENST00000461873 HAS1Q92839 578 aa9.87□□□□□ -0.83
LDB1-203ENST00000461873 CASD1Q96PB1 797 aa9.87□□□□□ -0.83
LDB1-203ENST00000461873 FOXP1Q9H334 677 aaPredicted RBP9.87□□□□□ -0.83
LDB1-203ENST00000461873 ANKEF1Q9NU02 776 aa9.87□□□□□ -0.83
LDB1-203ENST00000461873 KIAA1671Q9BY89 1806 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 CNTNAP2Q9UHC6 1331 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 REV3LO60673 3130 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 H3BQV1 296 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 PER2O15055 1255 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 EDIL3O43854 480 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 DTNBO60941 627 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 SLITRK3O94933 977 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 LARGE1O95461 756 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 ALDH2P05091 517 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 XRCC6P12956 609 aaKnown RBP eCLIP9.86□□□□□ -0.83
LDB1-203ENST00000461873 ITGA4P13612 1032 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 IRS1P35568 1242 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 TECP42680 631 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 BCAR1P56945 870 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 ADAM15Q13444 863 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 TPRNQ4KMQ1 711 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 NOMO2Q5JPE7 1267 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 MCTP1Q6DN14 999 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 CES5AQ6NT32 575 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 NOTUMQ6P988 496 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 ZBTB33Q86T24 672 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 FERMT3Q86UX7 667 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 ADHFE1Q8IWW8 467 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 CRIPAKQ8N1N5 446 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 MCPH1Q8NEM0 835 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 CASP10Q92851 521 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 NACC1Q96RE7 527 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 DHX33Q9H6R0 707 aaKnown RBP9.86□□□□□ -0.83
LDB1-203ENST00000461873 CWH43Q9H720 699 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 AGPAT5Q9NUQ2 364 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 PCDHB2Q9Y5E7 798 aa9.86□□□□□ -0.83
LDB1-203ENST00000461873 MYO7AQ13402 2215 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 ARHGEF35A5YM69 484 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 LRRIQ4A6NIV6 560 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 MBTPS2O43462 519 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 CXCL14O95715 111 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 OR52Z1P0C646 297 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 DNAJB1P25685 340 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 GTF2F1P35269 517 aaKnown RBP eCLIP9.85□□□□□ -0.83
LDB1-203ENST00000461873 RABEP1Q15276 862 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 ZNF174Q15697 407 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 CTC1Q2NKJ3 1217 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 EARS2Q5JPH6 523 aaKnown RBP9.85□□□□□ -0.83
LDB1-203ENST00000461873 TTC38Q5R3I4 469 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 LLGL2Q6P1M3 1020 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 MAEAQ7L5Y9 396 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 APBB1IPQ7Z5R6 666 aaPredicted RBP9.85□□□□□ -0.83
LDB1-203ENST00000461873 ADGRD2Q7Z7M1 963 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 LPPQ93052 612 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 CCDC51Q96ER9 411 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 IFT74Q96LB3 600 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 TRAIPQ9BWF2 469 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 EMILIN2Q9BXX0 1053 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 RSAD1Q9HA92 442 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 TUFT1Q9NNX1 390 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 SSX2IPQ9Y2D8 614 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 FAN1Q9Y2M0 1017 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 PLXNA4Q9HCM2 1894 aa9.85□□□□□ -0.83
LDB1-203ENST00000461873 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.84□□□□□ -0.83
LDB1-203ENST00000461873 FAM205CA6NFA0 338 aa9.84□□□□□ -0.83
LDB1-203ENST00000461873 POTEMA6NI47 508 aa9.84□□□□□ -0.83
LDB1-203ENST00000461873 NT5C1B-RDH14C9J2C7 533 aa9.84□□□□□ -0.83
LDB1-203ENST00000461873 LINC01565O15544 149 aa9.84□□□□□ -0.83
LDB1-203ENST00000461873 DCXO43602 365 aa9.84□□□□□ -0.83
LDB1-203ENST00000461873 USO1O60763 962 aaKnown RBP9.84□□□□□ -0.83
LDB1-203ENST00000461873 ZNF623O75123 536 aa9.84□□□□□ -0.83
LDB1-203ENST00000461873 STBD1O95210 358 aa9.84□□□□□ -0.83
LDB1-203ENST00000461873 SEC24BO95487 1268 aa9.84□□□□□ -0.83
LDB1-203ENST00000461873 LINC00271P0C7V0 271 aa9.84□□□□□ -0.83
LDB1-203ENST00000461873 PBX3P40426 434 aa9.84□□□□□ -0.83
LDB1-203ENST00000461873 TRAPPC10P48553 1259 aa9.84□□□□□ -0.83
LDB1-203ENST00000461873 MCM2P49736 904 aa9.84□□□□□ -0.83
LDB1-203ENST00000461873 ERVFC1P60507 584 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms