RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 C5orf42Q9H799 3197 aa19.41■□□□□ 0.7
MRPL28-207ENST00000461550 LAG3P18627 525 aa19.41■□□□□ 0.7
MRPL28-207ENST00000461550 GJB2P29033 226 aa19.41■□□□□ 0.7
MRPL28-207ENST00000461550 ORC2Q13416 577 aaPredicted RBP19.41■□□□□ 0.7
MRPL28-207ENST00000461550 MCTP1Q6DN14 999 aa19.41■□□□□ 0.7
MRPL28-207ENST00000461550 MAEAQ7L5Y9 396 aa19.41■□□□□ 0.7
MRPL28-207ENST00000461550 SRGAP1Q7Z6B7 1085 aa19.41■□□□□ 0.7
MRPL28-207ENST00000461550 C4orf32Q8N8J7 132 aa19.41■□□□□ 0.7
MRPL28-207ENST00000461550 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.41■□□□□ 0.7
MRPL28-207ENST00000461550 FAM105AQ9NUU6 356 aa19.41■□□□□ 0.7
MRPL28-207ENST00000461550 LINC01565O15544 149 aa19.41■□□□□ 0.7
MRPL28-207ENST00000461550 DGAT1O75907 488 aa19.41■□□□□ 0.7
MRPL28-207ENST00000461550 EOMESO95936 686 aa19.41■□□□□ 0.7
MRPL28-207ENST00000461550 TRAPPC10P48553 1259 aa19.41■□□□□ 0.7
MRPL28-207ENST00000461550 LEXMQ3ZCV2 418 aa19.41■□□□□ 0.7
MRPL28-207ENST00000461550 TUFT1Q9NNX1 390 aa19.41■□□□□ 0.7
MRPL28-207ENST00000461550 GPRC5CQ9NQ84 441 aa19.41■□□□□ 0.7
MRPL28-207ENST00000461550 ASAP2O43150 1006 aa19.4■□□□□ 0.7
MRPL28-207ENST00000461550 DLX2Q07687 328 aaPredicted RBP19.4■□□□□ 0.7
MRPL28-207ENST00000461550 CAPSQ13938 189 aa19.4■□□□□ 0.7
MRPL28-207ENST00000461550 COL19A1Q14993 1142 aa19.4■□□□□ 0.7
MRPL28-207ENST00000461550 CLUL1Q15846 466 aa19.4■□□□□ 0.7
MRPL28-207ENST00000461550 KCNT2Q6UVM3 1135 aa19.4■□□□□ 0.7
MRPL28-207ENST00000461550 RBM23Q86U06 439 aaKnown RBP19.4■□□□□ 0.7
MRPL28-207ENST00000461550 ERMNQ8TAM6 284 aa19.4■□□□□ 0.7
MRPL28-207ENST00000461550 TRAIPQ9BWF2 469 aa19.4■□□□□ 0.7
MRPL28-207ENST00000461550 POLR3FQ9H1D9 316 aaPredicted RBP19.4■□□□□ 0.7
MRPL28-207ENST00000461550 INPP5FQ9Y2H2 1132 aa19.4■□□□□ 0.7
MRPL28-207ENST00000461550 KIF3AQ9Y496 699 aa19.4■□□□□ 0.7
MRPL28-207ENST00000461550 IL9P15248 144 aa19.39■□□□□ 0.69
MRPL28-207ENST00000461550 GLRA2P23416 452 aa19.39■□□□□ 0.69
MRPL28-207ENST00000461550 HOXA11P31270 313 aaPredicted RBP19.39■□□□□ 0.69
MRPL28-207ENST00000461550 ARL2P36404 184 aa19.39■□□□□ 0.69
MRPL28-207ENST00000461550 LTBRP36941 435 aa19.39■□□□□ 0.69
MRPL28-207ENST00000461550 PTENP60484 403 aa19.39■□□□□ 0.69
MRPL28-207ENST00000461550 PTGDRQ13258 359 aa19.39■□□□□ 0.69
MRPL28-207ENST00000461550 MXD4Q14582 209 aaPredicted RBP19.39■□□□□ 0.69
MRPL28-207ENST00000461550 PTCRAQ6ISU1 281 aaPredicted RBP19.39■□□□□ 0.69
MRPL28-207ENST00000461550 MICAL1Q8TDZ2 1067 aa19.39■□□□□ 0.69
MRPL28-207ENST00000461550 ZNF558Q96NG5 402 aa19.39■□□□□ 0.69
MRPL28-207ENST00000461550 POLR3CQ9BUI4 534 aaPredicted RBP19.39■□□□□ 0.69
MRPL28-207ENST00000461550 TLR9Q9NR96 1032 aa19.39■□□□□ 0.69
MRPL28-207ENST00000461550 PCDHB2Q9Y5E7 798 aa19.39■□□□□ 0.69
MRPL28-207ENST00000461550 INO80B-WBP1J3KQ70 363 aa19.38■□□□□ 0.69
MRPL28-207ENST00000461550 TBX10O75333 385 aa19.38■□□□□ 0.69
MRPL28-207ENST00000461550 ERLIN2O94905 339 aa19.38■□□□□ 0.69
MRPL28-207ENST00000461550 RPA1P27694 616 aa19.38■□□□□ 0.69
MRPL28-207ENST00000461550 NRIP1P48552 1158 aa19.38■□□□□ 0.69
MRPL28-207ENST00000461550 ERVFC1P60507 584 aa19.38■□□□□ 0.69
MRPL28-207ENST00000461550 ECM1Q16610 540 aa19.38■□□□□ 0.69
MRPL28-207ENST00000461550 CTC1Q2NKJ3 1217 aa19.38■□□□□ 0.69
MRPL28-207ENST00000461550 UBXN11Q5T124 520 aa19.38■□□□□ 0.69
MRPL28-207ENST00000461550 CPB2Q96IY4 423 aa19.38■□□□□ 0.69
MRPL28-207ENST00000461550 NT5C1B-RDH14C9J2C7 533 aa19.37■□□□□ 0.69
MRPL28-207ENST00000461550 PER2O15055 1255 aa19.37■□□□□ 0.69
MRPL28-207ENST00000461550 TSPAN1O60635 241 aa19.37■□□□□ 0.69
MRPL28-207ENST00000461550 SKIP12755 728 aa19.37■□□□□ 0.69
MRPL28-207ENST00000461550 XRCC6P12956 609 aaKnown RBP eCLIP19.37■□□□□ 0.69
MRPL28-207ENST00000461550 CCT6AP40227 531 aaKnown RBP19.37■□□□□ 0.69
MRPL28-207ENST00000461550 FXR2P51116 673 aaKnown RBP eCLIP19.37■□□□□ 0.691e-9■■□□□ 11.7
MRPL28-207ENST00000461550 RAB27AP51159 221 aa19.37■□□□□ 0.69
MRPL28-207ENST00000461550 UBE3AQ05086 875 aa19.37■□□□□ 0.69
MRPL28-207ENST00000461550 TFDP1Q14186 410 aa19.37■□□□□ 0.69
MRPL28-207ENST00000461550 CSPP1Q1MSJ5 1256 aa19.37■□□□□ 0.69
MRPL28-207ENST00000461550 GLB1LQ6UWU2 654 aa19.37■□□□□ 0.69
MRPL28-207ENST00000461550 NACC1Q96RE7 527 aa19.37■□□□□ 0.69
MRPL28-207ENST00000461550 DBR1Q9UK59 544 aaKnown RBP19.37■□□□□ 0.69
MRPL28-207ENST00000461550 SMC3Q9UQE7 1217 aa19.37■□□□□ 0.69
MRPL28-207ENST00000461550 PP2D1A8MPX8 630 aa19.36■□□□□ 0.69
MRPL28-207ENST00000461550 H3BQV1 296 aa19.36■□□□□ 0.69
MRPL28-207ENST00000461550 ZNF623O75123 536 aa19.36■□□□□ 0.69
MRPL28-207ENST00000461550 ZC3H11AO75152 810 aaKnown RBP eCLIP19.36■□□□□ 0.69
MRPL28-207ENST00000461550 MCM2P49736 904 aa19.36■□□□□ 0.69
MRPL28-207ENST00000461550 AFF1P51825 1210 aaKnown RBP19.36■□□□□ 0.69
MRPL28-207ENST00000461550 MBTD1Q05BQ5 628 aa19.36■□□□□ 0.69
MRPL28-207ENST00000461550 IL17AQ16552 155 aa19.36■□□□□ 0.69
MRPL28-207ENST00000461550 PLPP4Q5VZY2 271 aa19.36■□□□□ 0.69
MRPL28-207ENST00000461550 AGMOQ6ZNB7 445 aa19.36■□□□□ 0.69
MRPL28-207ENST00000461550 MRPS27Q92552 414 aaKnown RBP19.36■□□□□ 0.69
MRPL28-207ENST00000461550 EIF2AQ9BY44 585 aaKnown RBP19.36■□□□□ 0.69
MRPL28-207ENST00000461550 MRPL9Q9BYD2 267 aaKnown RBP19.36■□□□□ 0.69
MRPL28-207ENST00000461550 GBP3Q9H0R5 595 aa19.36■□□□□ 0.69
MRPL28-207ENST00000461550 TBC1D13Q9NVG8 400 aa19.36■□□□□ 0.69
MRPL28-207ENST00000461550 SPG21Q9NZD8 308 aa19.36■□□□□ 0.69
MRPL28-207ENST00000461550 LRWD1Q9UFC0 647 aa19.36■□□□□ 0.69
MRPL28-207ENST00000461550 ARHGEF35A5YM69 484 aa19.35■□□□□ 0.69
MRPL28-207ENST00000461550 GRXCR2A6NFK2 248 aa19.35■□□□□ 0.69
MRPL28-207ENST00000461550 LRRIQ4A6NIV6 560 aa19.35■□□□□ 0.69
MRPL28-207ENST00000461550 B4GALT5O43286 388 aa19.35■□□□□ 0.69
MRPL28-207ENST00000461550 NCK2O43639 380 aa19.35■□□□□ 0.69
MRPL28-207ENST00000461550 OFD1O75665 1012 aa19.35■□□□□ 0.69
MRPL28-207ENST00000461550 BCAR1P56945 870 aa19.35■□□□□ 0.69
MRPL28-207ENST00000461550 RBM10P98175 930 aaKnown RBP19.35■□□□□ 0.69
MRPL28-207ENST00000461550 AMHR2Q16671 573 aa19.35■□□□□ 0.69
MRPL28-207ENST00000461550 NOMO2Q5JPE7 1267 aa19.35■□□□□ 0.69
MRPL28-207ENST00000461550 HAUS3Q68CZ6 603 aa19.35■□□□□ 0.69
MRPL28-207ENST00000461550 PADI6Q6TGC4 694 aa19.35■□□□□ 0.69
MRPL28-207ENST00000461550 SNX29Q8TEQ0 813 aa19.35■□□□□ 0.69
MRPL28-207ENST00000461550 PPP2R3CQ969Q6 453 aa19.35■□□□□ 0.69
MRPL28-207ENST00000461550 POLD4Q9HCU8 107 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms