RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 TOB2Q14106 344 aaPredicted RBP9.79□□□□□ -0.84
HDAC9-220ENST00000461409 SMAD2Q15796 467 aaKnown RBP9.79□□□□□ -0.84
HDAC9-220ENST00000461409 PTPRNQ16849 979 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 DESI1Q6ICB0 168 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 PDE12Q6L8Q7 609 aaKnown RBP9.79□□□□□ -0.84
HDAC9-220ENST00000461409 EFCAB12Q6NXP0 572 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 FAM228AQ86W67 206 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 EFHBQ8N7U6 833 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 TBCKQ8TEA7 893 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 POF1BQ8WVV4 589 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 SLC5A5Q92911 643 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 FAM122AQ96E09 287 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 ZNF274Q96GC6 653 aaPredicted RBP9.79□□□□□ -0.84
HDAC9-220ENST00000461409 SCLT1Q96NL6 688 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 PPP1R16BQ96T49 567 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 TEKT3Q9BXF9 490 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 IGFLR1Q9H665 355 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 TOR4AQ9NXH8 423 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 RAPGEFL1Q9UHV5 662 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 CD207Q9UJ71 328 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 MYO7AQ13402 2215 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 CYP3A7-CYP3A51PA0A087WV96 503 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 WNT7AO00755 349 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 DCXO43602 365 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 ZNF862O60290 1169 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 TBX10O75333 385 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 ZSCAN20P17040 1043 aaPredicted RBP9.78□□□□□ -0.84
HDAC9-220ENST00000461409 LAG3P18627 525 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 CYP3A7P24462 503 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 DNAJB1P25685 340 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 GATMP50440 423 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 DNM2P50570 870 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 NLRP11P59045 1033 aaKnown RBP9.78□□□□□ -0.84
HDAC9-220ENST00000461409 CDC42EP1Q00587 391 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 ADAM15Q13444 863 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 DSC3Q14574 896 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 CLUL1Q15846 466 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 Q4G0T1 1027 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 FAM102BQ5T8I3 360 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 MOXD1Q6UVY6 613 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 MIER3Q7Z3K6 550 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 THNSL1Q8IYQ7 743 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 ABI1Q8IZP0 508 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 BLIDQ8IZY5 108 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 LRRC71Q8N4P6 559 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 LINC01465Q8N7H1 131 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 DAGLBQ8NCG7 672 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 TMEM117Q9H0C3 514 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 ADAMTS10Q9H324 1103 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 UNC45AQ9H3U1 944 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 TLE6Q9H808 572 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 LIMD1Q9UGP4 676 aa9.78□□□□□ -0.84
HDAC9-220ENST00000461409 FAM86C2PA6NEL3 165 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 PRR33A8MZF0 331 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 MBTPS2O43462 519 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 PSMD10O75832 226 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 FGF18O76093 207 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 EYA4O95677 639 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 NEFLP07196 543 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 CCNYL3P0C7X3 344 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 SRGAP2BP0DMP2 458 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 FGFR1P11362 822 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 DARSP14868 501 aaKnown RBP9.77□□□□□ -0.85
HDAC9-220ENST00000461409 XBP1P17861 261 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 GTF2F1P35269 517 aaKnown RBP eCLIP9.77□□□□□ -0.85
HDAC9-220ENST00000461409 PPM1AP35813 382 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 NRIP1P48552 1158 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 GPC3P51654 580 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 DLX2Q07687 328 aaPredicted RBP9.77□□□□□ -0.85
HDAC9-220ENST00000461409 NONOQ15233 471 aaKnown RBP eCLIP9.77□□□□□ -0.85
HDAC9-220ENST00000461409 UGCGQ16739 394 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 TUSC1Q2TAM9 212 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 XKR3Q5GH77 459 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 KRT25Q7Z3Z0 450 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 LRRC43Q8N309 656 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 COLGALT1Q8NBJ5 622 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 MICAL1Q8TDZ2 1067 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 RSPH1Q8WYR4 309 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 CDCA3Q99618 268 aaPredicted RBP9.77□□□□□ -0.85
HDAC9-220ENST00000461409 NIFKQ9BYG3 293 aaKnown RBP9.77□□□□□ -0.85
HDAC9-220ENST00000461409 C11orf16Q9NQ32 467 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 TLR9Q9NR96 1032 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 PDRG1Q9NUG6 133 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 TYW1Q9NV66 732 aaKnown RBP9.77□□□□□ -0.85
HDAC9-220ENST00000461409 DACT1Q9NYF0 836 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 PUF60Q9UHX1 559 aaKnown RBP9.77□□□□□ -0.85
HDAC9-220ENST00000461409 LZTS1Q9Y250 596 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 C5orf42Q9H799 3197 aa9.77□□□□□ -0.85
HDAC9-220ENST00000461409 MYH9P35579 1960 aaKnown RBP9.76□□□□□ -0.85
HDAC9-220ENST00000461409 TRIOO75962 3097 aa9.76□□□□□ -0.85
HDAC9-220ENST00000461409 CCDC194A0A1B0GVG4 234 aa9.76□□□□□ -0.85
HDAC9-220ENST00000461409 CFAP99D6REC4 459 aa9.76□□□□□ -0.85
HDAC9-220ENST00000461409 M0R2N6 131 aa9.76□□□□□ -0.85
HDAC9-220ENST00000461409 LINC01565O15544 149 aa9.76□□□□□ -0.85
HDAC9-220ENST00000461409 EDIL3O43854 480 aa9.76□□□□□ -0.85
HDAC9-220ENST00000461409 TDP2O95551 362 aa9.76□□□□□ -0.85
HDAC9-220ENST00000461409 GCFC2P16383 781 aaKnown RBP9.76□□□□□ -0.85
HDAC9-220ENST00000461409 IRS1P35568 1242 aa9.76□□□□□ -0.85
HDAC9-220ENST00000461409 SKOR1P84550 965 aa9.76□□□□□ -0.85
HDAC9-220ENST00000461409 COASYQ13057 564 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms