RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 TFDP1Q14186 410 aa15.91■□□□□ 0.14
COL5A3-202ENST00000461214 KCNB1Q14721 858 aa15.91■□□□□ 0.14
COL5A3-202ENST00000461214 NT5DC1Q5TFE4 455 aa15.91■□□□□ 0.14
COL5A3-202ENST00000461214 RUFY4Q6ZNE9 571 aa15.91■□□□□ 0.14
COL5A3-202ENST00000461214 RBM43Q6ZSC3 357 aaKnown RBP15.91■□□□□ 0.14
COL5A3-202ENST00000461214 ZNF410Q86VK4 478 aa15.91■□□□□ 0.14
COL5A3-202ENST00000461214 KIAA0319LQ8IZA0 1049 aa15.91■□□□□ 0.14
COL5A3-202ENST00000461214 KCNN1Q92952 543 aa15.91■□□□□ 0.14
COL5A3-202ENST00000461214 TMEM143Q96AN5 459 aa15.91■□□□□ 0.14
COL5A3-202ENST00000461214 IFT74Q96LB3 600 aa15.91■□□□□ 0.14
COL5A3-202ENST00000461214 NFKBIZQ9BYH8 718 aa15.91■□□□□ 0.14
COL5A3-202ENST00000461214 BLZF1Q9H2G9 400 aa15.91■□□□□ 0.14
COL5A3-202ENST00000461214 GPRC5CQ9NQ84 441 aa15.91■□□□□ 0.14
COL5A3-202ENST00000461214 PANK4Q9NVE7 773 aa15.91■□□□□ 0.14
COL5A3-202ENST00000461214 SUCLA2Q9P2R7 463 aaPredicted RBP15.91■□□□□ 0.14
COL5A3-202ENST00000461214 AKT3Q9Y243 479 aa15.91■□□□□ 0.14
COL5A3-202ENST00000461214 NPHP3-ACAD11A0A0J9YXS1 232 aa15.9■□□□□ 0.14
COL5A3-202ENST00000461214 RSPH10B2B2RC85 870 aa15.9■□□□□ 0.14
COL5A3-202ENST00000461214 KLRC4O43908 158 aa15.9■□□□□ 0.14
COL5A3-202ENST00000461214 RSPH10BP0C881 870 aa15.9■□□□□ 0.14
COL5A3-202ENST00000461214 MAPTP10636 758 aaKnown RBP15.9■□□□□ 0.14
COL5A3-202ENST00000461214 BMP1P13497 986 aa15.9■□□□□ 0.14
COL5A3-202ENST00000461214 GLRA2P23416 452 aa15.9■□□□□ 0.14
COL5A3-202ENST00000461214 KCNQ1P51787 676 aa15.9■□□□□ 0.14
COL5A3-202ENST00000461214 CACNB1Q02641 598 aaPredicted RBP15.9■□□□□ 0.14
COL5A3-202ENST00000461214 DRP2Q13474 957 aa15.9■□□□□ 0.14
COL5A3-202ENST00000461214 BFSP2Q13515 415 aa15.9■□□□□ 0.14
COL5A3-202ENST00000461214 SKIV2LQ15477 1246 aaKnown RBP15.9■□□□□ 0.14
COL5A3-202ENST00000461214 TRIML1Q8N9V2 468 aa15.9■□□□□ 0.14
COL5A3-202ENST00000461214 DNAJB3Q8WWF6 145 aa15.9■□□□□ 0.14
COL5A3-202ENST00000461214 SPIRE2Q8WWL2 714 aa15.9■□□□□ 0.14
COL5A3-202ENST00000461214 DHX38Q92620 1227 aaKnown RBP15.9■□□□□ 0.14
COL5A3-202ENST00000461214 SMARCE1Q969G3 411 aa15.9■□□□□ 0.14
COL5A3-202ENST00000461214 ZBTB10Q96DT7 871 aa15.9■□□□□ 0.14
COL5A3-202ENST00000461214 FAM49AQ9H0Q0 323 aaPredicted RBP15.9■□□□□ 0.14
COL5A3-202ENST00000461214 TRPV6Q9H1D0 765 aa15.9■□□□□ 0.14
COL5A3-202ENST00000461214 EXOC1Q9NV70 894 aa15.9■□□□□ 0.14
COL5A3-202ENST00000461214 ARIH1Q9Y4X5 557 aaPredicted RBP15.9■□□□□ 0.14
COL5A3-202ENST00000461214 TRIP11Q15643 1979 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.89■□□□□ 0.13
COL5A3-202ENST00000461214 FAM86C2PA6NEL3 165 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 TRAK2O60296 914 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 RHOBTB3O94955 611 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 PHKA2P46019 1235 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 GPC3P51654 580 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 SMTNP53814 917 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 MRPS6P82932 125 aaKnown RBP15.89■□□□□ 0.13
COL5A3-202ENST00000461214 LAMTOR4Q0VGL1 99 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 PSMD2Q13200 908 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 ALCAMQ13740 583 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 CAPSQ13938 189 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 TRIM71Q2Q1W2 868 aaKnown RBP15.89■□□□□ 0.13
COL5A3-202ENST00000461214 TMEM31Q5JXX7 168 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 ODR4Q5SWX8 454 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 CDCA2Q69YH5 1023 aaPredicted RBP15.89■□□□□ 0.13
COL5A3-202ENST00000461214 CAVIN1Q6NZI2 390 aaKnown RBP15.89■□□□□ 0.13
COL5A3-202ENST00000461214 MAEAQ7L5Y9 396 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 SFR1Q86XK3 245 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 IFNLR1Q8IU57 520 aaPredicted RBP15.89■□□□□ 0.13
COL5A3-202ENST00000461214 RHPN2Q8IUC4 686 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 ASAP3Q8TDY4 903 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 PRPF31Q8WWY3 499 aaKnown RBP15.89■□□□□ 0.13
COL5A3-202ENST00000461214 C2orf40Q9H1Z8 148 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 ST6GALNAC4Q9H4F1 302 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 TMEM63CQ9P1W3 806 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 PCDHA5Q9Y5H7 936 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 TDRD15B5MCY1 1934 aaKnown RBP15.89■□□□□ 0.13
COL5A3-202ENST00000461214 PTPRSQ13332 1948 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 UBE4BO95155 1302 aa15.89■□□□□ 0.13
COL5A3-202ENST00000461214 TET1Q8NFU7 2136 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 MYO9BQ13459 2157 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 VTNP04004 478 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 CASP1P29466 404 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 NPTX2P47972 431 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 SARSP49591 514 aaKnown RBP15.88■□□□□ 0.13
COL5A3-202ENST00000461214 NCKAP1LP55160 1127 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 PEX3P56589 373 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 PCBP1Q15365 356 aaKnown RBP eCLIP15.88■□□□□ 0.13
COL5A3-202ENST00000461214 CAMK4Q16566 473 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 KMT5BQ4FZB7 885 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 FAM26DQ5JW98 314 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 FAM26FQ5R3K3 315 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 STXBP4Q6ZWJ1 553 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 FAM178BQ8IXR5 827 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 MYCT1Q8N699 235 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 BSNDQ8WZ55 320 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 WNT8BQ93098 351 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 HVCN1Q96D96 273 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 NTPCRQ9BSD7 190 aaKnown RBP15.88■□□□□ 0.13
COL5A3-202ENST00000461214 NKX2-4Q9H2Z4 354 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 ZHX3Q9H4I2 956 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 KMT5AQ9NQR1 393 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 CXXC1Q9P0U4 656 aaPredicted RBP15.88■□□□□ 0.13
COL5A3-202ENST00000461214 KIAA1468Q9P260 1216 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 ARHGAP28Q9P2N2 729 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 MSRAQ9UJ68 235 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 TBX21Q9UL17 535 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 TRPV2Q9Y5S1 764 aa15.88■□□□□ 0.13
COL5A3-202ENST00000461214 LRRIQ4A6NIV6 560 aa15.87■□□□□ 0.13
COL5A3-202ENST00000461214 K7ENM7 598 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms