RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 ZNF579Q8NAF0 562 aaKnown RBP20.54■□□□□ 0.88
COL9A2-205ENST00000461118 PBXIP1Q96AQ6 731 aa20.54■□□□□ 0.88
COL9A2-205ENST00000461118 CEP170P1Q96L14 293 aa20.54■□□□□ 0.88
COL9A2-205ENST00000461118 PPP1R16BQ96T49 567 aa20.54■□□□□ 0.88
COL9A2-205ENST00000461118 PHF7Q9BWX1 381 aaPredicted RBP20.54■□□□□ 0.88
COL9A2-205ENST00000461118 RGS18Q9NS28 235 aa20.54■□□□□ 0.88
COL9A2-205ENST00000461118 C9IYK1 514 aa20.53■□□□□ 0.88
COL9A2-205ENST00000461118 FSCN2O14926 492 aa20.53■□□□□ 0.88
COL9A2-205ENST00000461118 XRCC6P12956 609 aaKnown RBP eCLIP20.53■□□□□ 0.88
COL9A2-205ENST00000461118 DARSP14868 501 aaKnown RBP20.53■□□□□ 0.88
COL9A2-205ENST00000461118 RFC5P40937 340 aa20.53■□□□□ 0.88
COL9A2-205ENST00000461118 UBE3AQ05086 875 aa20.53■□□□□ 0.88
COL9A2-205ENST00000461118 DUSP6Q16828 381 aa20.53■□□□□ 0.88
COL9A2-205ENST00000461118 FAM102BQ5T8I3 360 aa20.53■□□□□ 0.88
COL9A2-205ENST00000461118 SLC7A3Q8WY07 619 aa20.53■□□□□ 0.88
COL9A2-205ENST00000461118 ASIC4Q96FT7 647 aa20.53■□□□□ 0.88
COL9A2-205ENST00000461118 SUCLA2Q9P2R7 463 aaPredicted RBP20.53■□□□□ 0.88
COL9A2-205ENST00000461118 PLXNA3P51805 1871 aa20.53■□□□□ 0.88
COL9A2-205ENST00000461118 POTEMA6NI47 508 aa20.52■□□□□ 0.88
COL9A2-205ENST00000461118 ZBTB39O15060 712 aa20.52■□□□□ 0.88
COL9A2-205ENST00000461118 SPATA31C1P0DKV0 1188 aa20.52■□□□□ 0.88
COL9A2-205ENST00000461118 ZNF410Q86VK4 478 aa20.52■□□□□ 0.88
COL9A2-205ENST00000461118 CWH43Q9H720 699 aa20.52■□□□□ 0.88
COL9A2-205ENST00000461118 TLE6Q9H808 572 aa20.52■□□□□ 0.88
COL9A2-205ENST00000461118 TLR9Q9NR96 1032 aa20.52■□□□□ 0.88
COL9A2-205ENST00000461118 C1orf112Q9NSG2 853 aa20.52■□□□□ 0.88
COL9A2-205ENST00000461118 ANKEF1Q9NU02 776 aa20.52■□□□□ 0.88
COL9A2-205ENST00000461118 LRFN2Q9ULH4 789 aa20.52■□□□□ 0.88
COL9A2-205ENST00000461118 H3BQV1 296 aa20.51■□□□□ 0.87
COL9A2-205ENST00000461118 GAS2O43903 313 aaKnown RBP20.51■□□□□ 0.87
COL9A2-205ENST00000461118 FGF18O76093 207 aa20.51■□□□□ 0.87
COL9A2-205ENST00000461118 ATF7P17544 494 aaPredicted RBP20.51■□□□□ 0.87
COL9A2-205ENST00000461118 TECP42680 631 aa20.51■□□□□ 0.87
COL9A2-205ENST00000461118 FXR2P51116 673 aaKnown RBP eCLIP20.51■□□□□ 0.87
COL9A2-205ENST00000461118 POLGP54098 1239 aaPredicted RBP20.51■□□□□ 0.87
COL9A2-205ENST00000461118 DSC3Q14574 896 aa20.51■□□□□ 0.87
COL9A2-205ENST00000461118 RILPL1Q5EBL4 403 aa20.51■□□□□ 0.87
COL9A2-205ENST00000461118 XKR9Q5GH70 373 aa20.51■□□□□ 0.87
COL9A2-205ENST00000461118 MCTP1Q6DN14 999 aa20.51■□□□□ 0.87
COL9A2-205ENST00000461118 TMEM184AQ6ZMB5 413 aa20.51■□□□□ 0.87
COL9A2-205ENST00000461118 SLC24A5Q71RS6 500 aa20.51■□□□□ 0.87
COL9A2-205ENST00000461118 NLRP7Q8WX94 980 aa20.51■□□□□ 0.87
COL9A2-205ENST00000461118 ADAM2Q99965 735 aa20.51■□□□□ 0.87
COL9A2-205ENST00000461118 POLR3CQ9BUI4 534 aaPredicted RBP20.51■□□□□ 0.87
COL9A2-205ENST00000461118 S1PR5Q9H228 398 aa20.51■□□□□ 0.87
COL9A2-205ENST00000461118 TUFT1Q9NNX1 390 aa20.51■□□□□ 0.87
COL9A2-205ENST00000461118 TYW1Q9NV66 732 aaKnown RBP20.51■□□□□ 0.87
COL9A2-205ENST00000461118 RNF216Q9NWF9 866 aaPredicted RBP20.51■□□□□ 0.87
COL9A2-205ENST00000461118 PCDHB7Q9Y5E2 793 aa20.51■□□□□ 0.87
COL9A2-205ENST00000461118 PCDHB6Q9Y5E3 794 aa20.51■□□□□ 0.87
COL9A2-205ENST00000461118 CFAP54Q96N23 3096 aa20.51■□□□□ 0.87
COL9A2-205ENST00000461118 CACNA1HO95180 2353 aa20.5■□□□□ 0.87
COL9A2-205ENST00000461118 DENND3A2RUS2 1198 aa20.5■□□□□ 0.87
COL9A2-205ENST00000461118 TBKBP1A7MCY6 615 aa20.5■□□□□ 0.87
COL9A2-205ENST00000461118 LAD1O00515 517 aa20.5■□□□□ 0.87
COL9A2-205ENST00000461118 FAM189BP81408 668 aa20.5■□□□□ 0.87
COL9A2-205ENST00000461118 PTGDRQ13258 359 aa20.5■□□□□ 0.87
COL9A2-205ENST00000461118 PDIA5Q14554 519 aa20.5■□□□□ 0.87
COL9A2-205ENST00000461118 NBR1Q14596 966 aa20.5■□□□□ 0.87
COL9A2-205ENST00000461118 LARP1BQ659C4 914 aaKnown RBP20.5■□□□□ 0.87
COL9A2-205ENST00000461118 CATSPER3Q86XQ3 398 aa20.5■□□□□ 0.87
COL9A2-205ENST00000461118 FBXL6Q8N531 539 aa20.5■□□□□ 0.87
COL9A2-205ENST00000461118 COLGALT1Q8NBJ5 622 aa20.5■□□□□ 0.87
COL9A2-205ENST00000461118 ZNF668Q96K58 619 aaPredicted RBP20.5■□□□□ 0.87
COL9A2-205ENST00000461118 RPGRIP1Q96KN7 1286 aa20.5■□□□□ 0.87
COL9A2-205ENST00000461118 GCOM2Q9BZD3 368 aaPredicted RBP20.5■□□□□ 0.87
COL9A2-205ENST00000461118 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.5■□□□□ 0.87
COL9A2-205ENST00000461118 PCDHB12Q9Y5F1 795 aa20.5■□□□□ 0.87
COL9A2-205ENST00000461118 MYO15AQ9UKN7 3530 aa20.49■□□□□ 0.87
COL9A2-205ENST00000461118 A0A087WZ62 844 aa20.49■□□□□ 0.87
COL9A2-205ENST00000461118 ASAP2O43150 1006 aa20.49■□□□□ 0.87
COL9A2-205ENST00000461118 PTPN5P54829 565 aa20.49■□□□□ 0.87
COL9A2-205ENST00000461118 VCPP55072 806 aaKnown RBP20.49■□□□□ 0.87
COL9A2-205ENST00000461118 SIGLEC14Q08ET2 396 aa20.49■□□□□ 0.87
COL9A2-205ENST00000461118 LRRC55Q6ZSA7 311 aa20.49■□□□□ 0.87
COL9A2-205ENST00000461118 RHPN2Q8IUC4 686 aa20.49■□□□□ 0.87
COL9A2-205ENST00000461118 ERMNQ8TAM6 284 aa20.49■□□□□ 0.87
COL9A2-205ENST00000461118 TCP11Q8WWU5 503 aa20.49■□□□□ 0.87
COL9A2-205ENST00000461118 SCLT1Q96NL6 688 aa20.49■□□□□ 0.87
COL9A2-205ENST00000461118 CDCA3Q99618 268 aaPredicted RBP20.49■□□□□ 0.87
COL9A2-205ENST00000461118 FDXACB1Q9BRP7 624 aaPredicted RBP20.49■□□□□ 0.87
COL9A2-205ENST00000461118 INO80BQ9C086 356 aaPredicted RBP20.49■□□□□ 0.87
COL9A2-205ENST00000461118 RNF19AQ9NV58 838 aa20.49■□□□□ 0.87
COL9A2-205ENST00000461118 ARID2Q68CP9 1835 aa20.48■□□□□ 0.87
COL9A2-205ENST00000461118 DGAT1O75907 488 aa20.48■□□□□ 0.87
COL9A2-205ENST00000461118 FGFR1P11362 822 aa20.48■□□□□ 0.87
COL9A2-205ENST00000461118 IBSPP21815 317 aaPredicted RBP20.48■□□□□ 0.87
COL9A2-205ENST00000461118 MUTP22033 750 aa20.48■□□□□ 0.87
COL9A2-205ENST00000461118 RPA1P27694 616 aa20.48■□□□□ 0.87
COL9A2-205ENST00000461118 PRPHP41219 470 aa20.48■□□□□ 0.87
COL9A2-205ENST00000461118 RARRES1P49788 294 aa20.48■□□□□ 0.87
COL9A2-205ENST00000461118 EMC2Q15006 297 aa20.48■□□□□ 0.87
COL9A2-205ENST00000461118 SYCE2Q6PIF2 218 aa20.48■□□□□ 0.87
COL9A2-205ENST00000461118 MICAL1Q8TDZ2 1067 aa20.48■□□□□ 0.87
COL9A2-205ENST00000461118 PRPF31Q8WWY3 499 aaKnown RBP20.48■□□□□ 0.87
COL9A2-205ENST00000461118 PSPC1Q8WXF1 523 aaKnown RBP20.48■□□□□ 0.87
COL9A2-205ENST00000461118 ELAC1Q9H777 363 aaKnown RBP20.48■□□□□ 0.87
COL9A2-205ENST00000461118 COL4A3BPQ9Y5P4 624 aa20.48■□□□□ 0.87
COL9A2-205ENST00000461118 MED24O75448 989 aa20.47■□□□□ 0.87
COL9A2-205ENST00000461118 ZSCAN20P17040 1043 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms