RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 SRGAP2CP0DJJ0 459 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 CKBP12277 381 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 GPC3P51654 580 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 PEX3P56589 373 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 RAD51AP2Q09MP3 1159 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 FAAP100Q0VG06 881 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 LRRC26Q2I0M4 334 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 ARSHQ5FYA8 562 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 FAM26DQ5JW98 314 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 CCDC183Q5T5S1 534 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 LRRC8DQ7L1W4 858 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 SH3RF1Q7Z6J0 888 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 APBB2Q92870 758 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 FTHL17Q9BXU8 183 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 CLSTN2Q9H4D0 955 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 ST6GALNAC4Q9H4F1 302 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 TMEM206Q9H813 350 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 PRMT7Q9NVM4 692 aaPredicted RBP12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 GINS2Q9Y248 185 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 FRMD3A2A2Y4 597 aa12.14□□□□□ -0.47
SMNDC1-203ENST00000460483 EFCAB14O75071 495 aa12.14□□□□□ -0.47
SMNDC1-203ENST00000460483 RPS6KA5O75582 802 aa12.14□□□□□ -0.47
SMNDC1-203ENST00000460483 ACTN1P12814 892 aa12.14□□□□□ -0.47
SMNDC1-203ENST00000460483 ZSCAN20P17040 1043 aaPredicted RBP12.14□□□□□ -0.47
SMNDC1-203ENST00000460483 AXLP30530 894 aa12.14□□□□□ -0.47
SMNDC1-203ENST00000460483 NPTX2P47972 431 aa12.14□□□□□ -0.47
SMNDC1-203ENST00000460483 SNRPFP62306 86 aaKnown RBP12.14□□□□□ -0.47
SMNDC1-203ENST00000460483 ZNF200P98182 395 aaPredicted RBP12.14□□□□□ -0.47
SMNDC1-203ENST00000460483 TMEM132AQ24JP5 1023 aa12.14□□□□□ -0.47
SMNDC1-203ENST00000460483 FAM26FQ5R3K3 315 aa12.14□□□□□ -0.47
SMNDC1-203ENST00000460483 SASS6Q6UVJ0 657 aa12.14□□□□□ -0.47
SMNDC1-203ENST00000460483 HACE1Q8IYU2 909 aa12.14□□□□□ -0.47
SMNDC1-203ENST00000460483 LINC01465Q8N7H1 131 aa12.14□□□□□ -0.47
SMNDC1-203ENST00000460483 GOLGA5Q8TBA6 731 aa12.14□□□□□ -0.47
SMNDC1-203ENST00000460483 KCNN1Q92952 543 aa12.14□□□□□ -0.47
SMNDC1-203ENST00000460483 MTIF3Q9H2K0 278 aaKnown RBP12.14□□□□□ -0.47
SMNDC1-203ENST00000460483 TMEM134Q9H6X4 195 aa12.14□□□□□ -0.47
SMNDC1-203ENST00000460483 XPNPEP1Q9NQW7 623 aa12.14□□□□□ -0.47
SMNDC1-203ENST00000460483 UBE4BO95155 1302 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 INO80B-WBP1J3KQ70 363 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 RHOBTB3O94955 611 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 GCNT3O95395 438 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 VTNP04004 478 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 SKIP12755 728 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 DARSP14868 501 aaKnown RBP12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 GLRA2P23416 452 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 PTENP60484 403 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 DPYDQ12882 1025 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 PAK2Q13177 524 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 PPIGQ13427 754 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 CUL4BQ13620 913 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 NFKBIBQ15653 356 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 KIZQ2M2Z5 673 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 MFSD5Q6N075 450 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 RUFY4Q6ZNE9 571 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 SEPT8Q92599 483 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 STAMQ92783 540 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 DNAJC19Q96DA6 116 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 CCDC51Q96ER9 411 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 ADPGKQ9BRR6 497 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 NOC4LQ9BVI4 516 aaKnown RBP12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 MRPL4Q9BYD3 311 aaKnown RBP12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 BLZF1Q9H2G9 400 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 CHST12Q9NRB3 414 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 KIAA1468Q9P260 1216 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 CGNQ9P2M7 1197 aaKnown RBP12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 TBX21Q9UL17 535 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 CDY2AQ9Y6F7 541 aa12.13□□□□□ -0.47
SMNDC1-203ENST00000460483 A0A087WZ62 844 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 K7ENM7 598 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 EIF3DO15371 548 aaKnown RBP eCLIP12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 GPR32O75388 356 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 CTSHP09668 335 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 IQCF3P0C7M6 154 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 NCKAP1LP55160 1127 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 MDM2Q00987 491 aaPredicted RBP12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 COASYQ13057 564 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 CAPSQ13938 189 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 CAMK4Q16566 473 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 KYAT1Q16773 422 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 CT47A1Q5JQC4 288 aaPredicted RBP12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 ZNF618Q5T7W0 954 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 NT5DC1Q5TFE4 455 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 CDCA2Q69YH5 1023 aaPredicted RBP12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 TSHZ1Q6ZSZ6 1077 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 HS2ST1Q7LGA3 356 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 CATSPER4Q7RTX7 472 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 ZNF720Q7Z2F6 126 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 HAUS6Q7Z4H7 955 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 C7orf61Q8IZ16 206 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 SYCP3Q8IZU3 236 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 RSPH1Q8WYR4 309 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 BICD1Q96G01 975 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 ACCSQ96QU6 501 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 FDXACB1Q9BRP7 624 aaPredicted RBP12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 NAT10Q9H0A0 1025 aaKnown RBP12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 GPRC5CQ9NQ84 441 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 PCDHA5Q9Y5H7 936 aa12.12□□□□□ -0.47
SMNDC1-203ENST00000460483 NPHP3-ACAD11A0A0J9YXS1 232 aa12.11□□□□□ -0.47
SMNDC1-203ENST00000460483 DENND3A2RUS2 1198 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms