RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 SFR1Q86XK3 245 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 CD302Q8IX05 232 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 ERMNQ8TAM6 284 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 EIF2AK1Q9BQI3 630 aaKnown RBP14.69□□□□□ -0.06
TOP3B-213ENST00000457179 REEP2Q9BRK0 252 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.69□□□□□ -0.06
TOP3B-213ENST00000457179 PCDHB13Q9Y5F0 798 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 ZNF541Q9H0D2 1346 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 SMNDC1O75940 238 aaKnown RBP eCLIP14.69□□□□□ -0.062e-6■■■■□ 24.8
TOP3B-213ENST00000457179 CYP11B2P19099 503 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 TNFRSF8P28908 595 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 RAPGEF1Q13905 1077 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 CCDC65Q8IXS2 484 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 SLFN12Q8IYM2 578 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 KCNV2Q8TDN2 545 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 DNAJC19Q96DA6 116 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 NT5C3AQ9H0P0 336 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 TAF1DQ9H5J8 278 aaPredicted RBP14.69□□□□□ -0.06
TOP3B-213ENST00000457179 NOP53Q9NZM5 478 aaKnown RBP14.69□□□□□ -0.06
TOP3B-213ENST00000457179 ATRNL1Q5VV63 1379 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 PVALEFA0A1B0GWK0 134 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 RAD51CO43502 376 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 PECAM1P16284 738 aaPredicted RBP14.68□□□□□ -0.06
TOP3B-213ENST00000457179 ZNF844Q08AG5 666 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 AP3B2Q13367 1082 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 ZC2HC1CQ53FD0 456 aaPredicted RBP14.68□□□□□ -0.06
TOP3B-213ENST00000457179 LACTB2Q53H82 288 aaPredicted RBP14.68□□□□□ -0.06
TOP3B-213ENST00000457179 ZNF662Q6ZS27 426 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 ZNF572Q7Z3I7 529 aaPredicted RBP14.68□□□□□ -0.06
TOP3B-213ENST00000457179 MYCT1Q8N699 235 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 CCDC197Q8NCU1 140 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 LENG9Q96B70 501 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 RUSC1Q9BVN2 902 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 RPAP3Q9H6T3 665 aaPredicted RBP14.68□□□□□ -0.06
TOP3B-213ENST00000457179 KCNMB3Q9NPA1 279 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 EMILIN3Q9NT22 766 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 STK38LQ9Y2H1 464 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 MYH4Q9Y623 1939 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 CCT8L1PA6NM43 557 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 HGSO14964 777 aaPredicted RBP14.68□□□□□ -0.06
TOP3B-213ENST00000457179 CTNND1O60716 968 aaKnown RBP14.68□□□□□ -0.06
TOP3B-213ENST00000457179 TBCAO75347 108 aaKnown RBP14.68□□□□□ -0.06
TOP3B-213ENST00000457179 DDNO94850 711 aaPredicted RBP14.68□□□□□ -0.06
TOP3B-213ENST00000457179 TGFB2P61812 414 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 TNFAIP1Q13829 316 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 EMC10Q5UCC4 262 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 RETREG2Q8NC44 543 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 C3orf20Q8ND61 904 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 ETNPPLQ8TBG4 499 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 WHAMMQ8TF30 809 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 ATG4CQ96DT6 458 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 COL20A1Q9P218 1284 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 PLAGL2Q9UPG8 496 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 LTBP1Q14766 1721 aa14.68□□□□□ -0.06
TOP3B-213ENST00000457179 ANKRD33BA6NCL7 494 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 SREBF1P36956 1147 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 ADAM9Q13443 819 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 KRT71Q3SY84 523 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 ARSHQ5FYA8 562 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 PICK1Q9NRD5 415 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 MRPL11Q9Y3B7 192 aaKnown RBP14.67□□□□□ -0.06
TOP3B-213ENST00000457179 RABGAP1Q9Y3P9 1069 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 COL4A3BPQ9Y5P4 624 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 IPO5O00410 1097 aaKnown RBP14.67□□□□□ -0.06
TOP3B-213ENST00000457179 FOSP01100 380 aaPredicted RBP14.67□□□□□ -0.06
TOP3B-213ENST00000457179 SPATA31C1P0DKV0 1188 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 MYBP10242 640 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 ACTN1P12814 892 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 RPS6KA3P51812 740 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 KCNJ2P63252 427 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 KCNMA1Q12791 1236 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 TMEM119Q4V9L6 283 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 CEP55Q53EZ4 464 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 CNKSR2Q8WXI2 1034 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 GLT8D2Q9H1C3 349 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 KDM4CQ9H3R0 1056 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 RIPK3Q9Y572 518 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 LRRC37AA6NMS7 1700 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 A8MUI8 341 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 VCAM1P19320 739 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 NMT1P30419 496 aaKnown RBP14.67□□□□□ -0.06
TOP3B-213ENST00000457179 FKBP3Q00688 224 aaKnown RBP14.67□□□□□ -0.06
TOP3B-213ENST00000457179 SELENOSQ9BQE4 189 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 ZCWPW1Q9H0M4 648 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.67□□□□□ -0.06
TOP3B-213ENST00000457179 C10orf71Q711Q0 1435 aa14.67□□□□□ -0.06
TOP3B-213ENST00000457179 SMIM23A6NLE4 172 aa14.66□□□□□ -0.06
TOP3B-213ENST00000457179 PRLRP16471 622 aa14.66□□□□□ -0.06
TOP3B-213ENST00000457179 DRD4P21917 467 aa14.66□□□□□ -0.06
TOP3B-213ENST00000457179 NR2F2P24468 414 aa14.66□□□□□ -0.06
TOP3B-213ENST00000457179 RAB27AP51159 221 aa14.66□□□□□ -0.06
TOP3B-213ENST00000457179 RPS6P62753 249 aaKnown RBP14.66□□□□□ -0.06
TOP3B-213ENST00000457179 TTLL12Q14166 644 aaPredicted RBP14.66□□□□□ -0.06
TOP3B-213ENST00000457179 UAP1Q16222 522 aaPredicted RBP14.66□□□□□ -0.06
TOP3B-213ENST00000457179 WDR78Q5VTH9 848 aa14.66□□□□□ -0.06
TOP3B-213ENST00000457179 KLHDC7AQ5VTJ3 777 aa14.66□□□□□ -0.06
TOP3B-213ENST00000457179 KIF2BQ8N4N8 673 aa14.66□□□□□ -0.06
TOP3B-213ENST00000457179 MREGQ8N565 214 aa14.66□□□□□ -0.06
TOP3B-213ENST00000457179 ANKS4BQ8N8V4 417 aa14.66□□□□□ -0.06
TOP3B-213ENST00000457179 FAM133AQ8N9E0 248 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms