RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.14□□□□□ -0.63
ATG4A-206ENST00000457035 C2orf72A6NCS6 295 aa11.14□□□□□ -0.63
ATG4A-206ENST00000457035 GPR182O15218 404 aa11.14□□□□□ -0.63
ATG4A-206ENST00000457035 SSBP05455 408 aaKnown RBP eCLIP11.14□□□□□ -0.63
ATG4A-206ENST00000457035 CMA1P23946 247 aa11.14□□□□□ -0.63
ATG4A-206ENST00000457035 GUCY2CP25092 1073 aa11.14□□□□□ -0.63
ATG4A-206ENST00000457035 TXLNAP40222 546 aa11.14□□□□□ -0.63
ATG4A-206ENST00000457035 PTENP60484 403 aa11.14□□□□□ -0.63
ATG4A-206ENST00000457035 NFX1Q12986 1120 aaKnown RBP11.14□□□□□ -0.63
ATG4A-206ENST00000457035 MAPK7Q13164 816 aa11.14□□□□□ -0.63
ATG4A-206ENST00000457035 CAPSQ13938 189 aa11.14□□□□□ -0.63
ATG4A-206ENST00000457035 E2F4Q16254 413 aa11.14□□□□□ -0.63
ATG4A-206ENST00000457035 FAM102BQ5T8I3 360 aa11.14□□□□□ -0.63
ATG4A-206ENST00000457035 CCDC73Q6ZRK6 1079 aa11.14□□□□□ -0.63
ATG4A-206ENST00000457035 FAM43BQ6ZT52 329 aaPredicted RBP11.14□□□□□ -0.63
ATG4A-206ENST00000457035 SRGAP1Q7Z6B7 1085 aa11.14□□□□□ -0.63
ATG4A-206ENST00000457035 PDILTQ8N807 584 aa11.14□□□□□ -0.63
ATG4A-206ENST00000457035 RNF149Q8NC42 400 aa11.14□□□□□ -0.63
ATG4A-206ENST00000457035 RASSF8Q8NHQ8 419 aa11.14□□□□□ -0.63
ATG4A-206ENST00000457035 BSNDQ8WZ55 320 aa11.14□□□□□ -0.63
ATG4A-206ENST00000457035 LARP4BQ92615 738 aaKnown RBP11.14□□□□□ -0.63
ATG4A-206ENST00000457035 NLRP4Q96MN2 994 aa11.14□□□□□ -0.63
ATG4A-206ENST00000457035 INO80BQ9C086 356 aaPredicted RBP11.14□□□□□ -0.63
ATG4A-206ENST00000457035 KCND2Q9NZV8 630 aa11.14□□□□□ -0.63
ATG4A-206ENST00000457035 STK17AQ9UEE5 414 aa11.14□□□□□ -0.63
ATG4A-206ENST00000457035 NPHP3-ACAD11A0A0J9YXS1 232 aa11.13□□□□□ -0.63
ATG4A-206ENST00000457035 SFI1A8K8P3 1242 aa11.13□□□□□ -0.63
ATG4A-206ENST00000457035 GTPBP6O43824 516 aaPredicted RBP11.13□□□□□ -0.63
ATG4A-206ENST00000457035 MGEA5O60502 916 aa11.13□□□□□ -0.63
ATG4A-206ENST00000457035 EFCAB14O75071 495 aa11.13□□□□□ -0.63
ATG4A-206ENST00000457035 HIP1RO75146 1068 aa11.13□□□□□ -0.63
ATG4A-206ENST00000457035 FGFR4P22455 802 aa11.13□□□□□ -0.63
ATG4A-206ENST00000457035 WDR5P61964 334 aaKnown RBP11.13□□□□□ -0.63
ATG4A-206ENST00000457035 PAK2Q13177 524 aa11.13□□□□□ -0.63
ATG4A-206ENST00000457035 GIT2Q14161 759 aa11.13□□□□□ -0.63
ATG4A-206ENST00000457035 DHX8Q14562 1220 aaKnown RBP11.13□□□□□ -0.63
ATG4A-206ENST00000457035 DSC3Q14574 896 aa11.13□□□□□ -0.63
ATG4A-206ENST00000457035 ODR4Q5SWX8 454 aa11.13□□□□□ -0.63
ATG4A-206ENST00000457035 FAM109BQ6ICB4 259 aaPredicted RBP11.13□□□□□ -0.63
ATG4A-206ENST00000457035 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.13□□□□□ -0.63
ATG4A-206ENST00000457035 LINC01599Q8WXQ3 324 aa11.13□□□□□ -0.63
ATG4A-206ENST00000457035 KIFAP3Q92845 792 aa11.13□□□□□ -0.63
ATG4A-206ENST00000457035 SCLT1Q96NL6 688 aa11.13□□□□□ -0.63
ATG4A-206ENST00000457035 NTPCRQ9BSD7 190 aaKnown RBP11.13□□□□□ -0.63
ATG4A-206ENST00000457035 TIPINQ9BVW5 301 aa11.13□□□□□ -0.63
ATG4A-206ENST00000457035 FTHL17Q9BXU8 183 aa11.13□□□□□ -0.63
ATG4A-206ENST00000457035 NFKBIZQ9BYH8 718 aa11.13□□□□□ -0.63
ATG4A-206ENST00000457035 MTIF3Q9H2K0 278 aaKnown RBP11.13□□□□□ -0.63
ATG4A-206ENST00000457035 SLC4A7Q9Y6M7 1214 aa11.13□□□□□ -0.63
ATG4A-206ENST00000457035 TRIP11Q15643 1979 aa11.13□□□□□ -0.63
ATG4A-206ENST00000457035 FAM237AA0A1B0GTK4 181 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.12□□□□□ -0.63
ATG4A-206ENST00000457035 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.12□□□□□ -0.63
ATG4A-206ENST00000457035 A0A1W2PQ27 194 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 A0A1W2PQ64 194 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 A0A1W2PQD8 194 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 MYMKA6NI61 221 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 ZBBXA8MT70 800 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 GRXCR1A8MXD5 290 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 POLR2DO15514 142 aaKnown RBP11.12□□□□□ -0.63
ATG4A-206ENST00000457035 HOXA11P31270 313 aaPredicted RBP11.12□□□□□ -0.63
ATG4A-206ENST00000457035 STAT6P42226 847 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 NAMPTP43490 491 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 DEFB103AP81534 67 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 RAD51AP2Q09MP3 1159 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 TFDP1Q14186 410 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 CDCA2Q69YH5 1023 aaPredicted RBP11.12□□□□□ -0.63
ATG4A-206ENST00000457035 SV2BQ7L1I2 683 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 GPBP1Q86WP2 473 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.12□□□□□ -0.63
ATG4A-206ENST00000457035 CRIPAKQ8N1N5 446 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 IQUBQ8NA54 791 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 PHOSPHO2Q8TCD6 241 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 TOP1MTQ969P6 601 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 MARVELD3Q96A59 401 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 CDX2Q99626 313 aaPredicted RBP11.12□□□□□ -0.63
ATG4A-206ENST00000457035 C17orf75Q9HAS0 396 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 RGS18Q9NS28 235 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 KBTBD4Q9NVX7 518 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 FAM13BQ9NYF5 915 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 KCNH3Q9ULD8 1083 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 HPSEQ9Y251 543 aa11.12□□□□□ -0.63
ATG4A-206ENST00000457035 FNDC1Q4ZHG4 1894 aaPredicted RBP11.11□□□□□ -0.63
ATG4A-206ENST00000457035 MYO7AQ13402 2215 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 A0A1B0GVL5 298 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 C9IYK1 514 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 HOXB1P14653 301 aaPredicted RBP11.11□□□□□ -0.63
ATG4A-206ENST00000457035 ATP2A2P16615 1042 aaKnown RBP11.11□□□□□ -0.63
ATG4A-206ENST00000457035 PHKA2P46019 1235 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 NPTX2P47972 431 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 KCNJ6P48051 423 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 ZNF131P52739 623 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 PEX3P56589 373 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 FAM189BP81408 668 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 MBTD1Q05BQ5 628 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 PPP2R5AQ15172 486 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 PCBP1Q15365 356 aaKnown RBP eCLIP11.11□□□□□ -0.63
ATG4A-206ENST00000457035 AMHR2Q16671 573 aa11.11□□□□□ -0.63
ATG4A-206ENST00000457035 TMCO2Q7Z6W1 182 aaPredicted RBP11.11□□□□□ -0.63
ATG4A-206ENST00000457035 DDX12PQ92771 950 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms