RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 ZNF598Q86UK7 904 aaKnown RBP18.02■□□□□ 0.48
CPSF6-203ENST00000456847 ADAMTS19Q8TE59 1207 aa18.02■□□□□ 0.48
CPSF6-203ENST00000456847 SNX29Q8TEQ0 813 aa18.02■□□□□ 0.48
CPSF6-203ENST00000456847 POF1BQ8WVV4 589 aa18.02■□□□□ 0.48
CPSF6-203ENST00000456847 CWH43Q9H720 699 aa18.02■□□□□ 0.48
CPSF6-203ENST00000456847 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.02■□□□□ 0.48
CPSF6-203ENST00000456847 STK24Q9Y6E0 443 aa18.02■□□□□ 0.48
CPSF6-203ENST00000456847 INO80B-WBP1J3KQ70 363 aa18.02■□□□□ 0.47
CPSF6-203ENST00000456847 MCPH1Q8NEM0 835 aa18.02■□□□□ 0.47
CPSF6-203ENST00000456847 SPPL3Q8TCT6 385 aa18.02■□□□□ 0.47
CPSF6-203ENST00000456847 LPPQ93052 612 aa18.02■□□□□ 0.47
CPSF6-203ENST00000456847 MRPL9Q9BYD2 267 aaKnown RBP18.02■□□□□ 0.47
CPSF6-203ENST00000456847 MUTP22033 750 aa18.01■□□□□ 0.47
CPSF6-203ENST00000456847 KCNA5P22460 613 aa18.01■□□□□ 0.47
CPSF6-203ENST00000456847 GLRA2P23416 452 aa18.01■□□□□ 0.47
CPSF6-203ENST00000456847 ARL2P36404 184 aa18.01■□□□□ 0.47
CPSF6-203ENST00000456847 PTENP60484 403 aa18.01■□□□□ 0.47
CPSF6-203ENST00000456847 DTHD1Q6ZMT9 781 aa18.01■□□□□ 0.47
CPSF6-203ENST00000456847 PPP2R3CQ969Q6 453 aa18.01■□□□□ 0.47
CPSF6-203ENST00000456847 PGBD4Q96DM1 585 aa18.01■□□□□ 0.47
CPSF6-203ENST00000456847 ZNF558Q96NG5 402 aa18.01■□□□□ 0.47
CPSF6-203ENST00000456847 TRAIPQ9BWF2 469 aa18.01■□□□□ 0.47
CPSF6-203ENST00000456847 GPRC5CQ9NQ84 441 aa18.01■□□□□ 0.47
CPSF6-203ENST00000456847 INPP5FQ9Y2H2 1132 aa18.01■□□□□ 0.47
CPSF6-203ENST00000456847 LRRIQ4A6NIV6 560 aa18■□□□□ 0.47
CPSF6-203ENST00000456847 FGF18O76093 207 aa18■□□□□ 0.47
CPSF6-203ENST00000456847 NCBP1Q09161 790 aaKnown RBP18■□□□□ 0.47
CPSF6-203ENST00000456847 PADI6Q6TGC4 694 aa18■□□□□ 0.47
CPSF6-203ENST00000456847 GLB1LQ6UWU2 654 aa18■□□□□ 0.47
CPSF6-203ENST00000456847 UHRF1Q96T88 793 aaPredicted RBP18■□□□□ 0.47
CPSF6-203ENST00000456847 CLDND1Q9NY35 253 aa18■□□□□ 0.47
CPSF6-203ENST00000456847 DNAJB1P25685 340 aa18■□□□□ 0.47
CPSF6-203ENST00000456847 PRPHP41219 470 aa18■□□□□ 0.47
CPSF6-203ENST00000456847 UBE3AQ05086 875 aa18■□□□□ 0.47
CPSF6-203ENST00000456847 PDIA5Q14554 519 aa18■□□□□ 0.47
CPSF6-203ENST00000456847 KRT79Q5XKE5 535 aa18■□□□□ 0.47
CPSF6-203ENST00000456847 LRRC55Q6ZSA7 311 aa18■□□□□ 0.47
CPSF6-203ENST00000456847 IGSF22Q8N9C0 903 aa18■□□□□ 0.47
CPSF6-203ENST00000456847 DDX19AQ9NUU7 478 aaKnown RBP18■□□□□ 0.47
CPSF6-203ENST00000456847 KIAA1024Q9UPX6 916 aa18■□□□□ 0.47
CPSF6-203ENST00000456847 PCDHB2Q9Y5E7 798 aa18■□□□□ 0.47
CPSF6-203ENST00000456847 VPS37CA5D8V6 355 aaPredicted RBP17.99■□□□□ 0.47
CPSF6-203ENST00000456847 TSPAN1O60635 241 aa17.99■□□□□ 0.47
CPSF6-203ENST00000456847 CUL4AQ13619 759 aa17.99■□□□□ 0.47
CPSF6-203ENST00000456847 PCBP1Q15365 356 aaKnown RBP eCLIP17.99■□□□□ 0.477e-11■□□□□ 8.4
CPSF6-203ENST00000456847 KCNT2Q6UVM3 1135 aa17.99■□□□□ 0.47
CPSF6-203ENST00000456847 MICAL1Q8TDZ2 1067 aa17.99■□□□□ 0.47
CPSF6-203ENST00000456847 PABPC5Q96DU9 382 aaKnown RBP17.99■□□□□ 0.47
CPSF6-203ENST00000456847 IGFLR1Q9H665 355 aa17.99■□□□□ 0.47
CPSF6-203ENST00000456847 GTF3C3Q9Y5Q9 886 aa17.99■□□□□ 0.47
CPSF6-203ENST00000456847 MYO7AQ13402 2215 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 PP2D1A8MPX8 630 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 BMP1P13497 986 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 AXLP30530 894 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 IRS1P35568 1242 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 PPM1AP35813 382 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 PBX3P40426 434 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 MBTD1Q05BQ5 628 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 POU5F1BQ06416 359 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 CAMK1Q14012 370 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 ECM1Q16610 540 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 NOTUMQ6P988 496 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 IFNLR1Q8IU57 520 aaPredicted RBP17.98■□□□□ 0.47
CPSF6-203ENST00000456847 ZBTB8OSQ8IWT0 167 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 URGCPQ8TCY9 931 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 RSPH1Q8WYR4 309 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 CPB2Q96IY4 423 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 BHMT2Q9H2M3 363 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 TLR9Q9NR96 1032 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 REV3LO60673 3130 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.98■□□□□ 0.47
CPSF6-203ENST00000456847 NCK2O43639 380 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 ZNF623O75123 536 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 ATP2C1P98194 919 aaPredicted RBP17.98■□□□□ 0.47
CPSF6-203ENST00000456847 RNASELQ05823 741 aaKnown RBP17.98■□□□□ 0.47
CPSF6-203ENST00000456847 HYAL1Q12794 435 aa17.98■□□□□ 0.47
CPSF6-203ENST00000456847 ZRSR1Q15695 479 aaKnown RBP17.98■□□□□ 0.47
CPSF6-203ENST00000456847 MEIS3P2A8K0S8 358 aa17.97■□□□□ 0.47
CPSF6-203ENST00000456847 ZC3H11AO75152 810 aaKnown RBP eCLIP17.97■□□□□ 0.47
CPSF6-203ENST00000456847 CYP11B2P19099 503 aa17.97■□□□□ 0.47
CPSF6-203ENST00000456847 HOXA11P31270 313 aaPredicted RBP17.97■□□□□ 0.47
CPSF6-203ENST00000456847 NOMO2Q5JPE7 1267 aa17.97■□□□□ 0.47
CPSF6-203ENST00000456847 UBXN11Q5T124 520 aa17.97■□□□□ 0.47
CPSF6-203ENST00000456847 CCDC51Q96ER9 411 aa17.97■□□□□ 0.47
CPSF6-203ENST00000456847 NFKBIZQ9BYH8 718 aa17.97■□□□□ 0.47
CPSF6-203ENST00000456847 TRIM6Q9C030 488 aaPredicted RBP17.97■□□□□ 0.47
CPSF6-203ENST00000456847 RSAD1Q9HA92 442 aa17.97■□□□□ 0.47
CPSF6-203ENST00000456847 SPG21Q9NZD8 308 aa17.97■□□□□ 0.47
CPSF6-203ENST00000456847 PUF60Q9UHX1 559 aaKnown RBP17.97■□□□□ 0.47
CPSF6-203ENST00000456847 BRWD1Q9NSI6 2320 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 H3BQ06 376 aaPredicted RBP17.96■□□□□ 0.47
CPSF6-203ENST00000456847 PDCP20941 246 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 KRT17Q04695 432 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 IL17AQ16552 155 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 TMEM132AQ24JP5 1023 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 LEXMQ3ZCV2 418 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 ADGRD2Q7Z7M1 963 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 CNNM3Q8NE01 707 aa17.96■□□□□ 0.47
CPSF6-203ENST00000456847 MRPS27Q92552 414 aaKnown RBP17.96■□□□□ 0.47
CPSF6-203ENST00000456847 NECAB3Q96P71 396 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms