RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 CHMP2AO43633 222 aa13.39□□□□□ -0.27
LMCD1-206ENST00000456506 LILRB3O75022 631 aa13.39□□□□□ -0.27
LMCD1-206ENST00000456506 MAFO75444 373 aaPredicted RBP13.39□□□□□ -0.27
LMCD1-206ENST00000456506 TDP2O95551 362 aa13.39□□□□□ -0.27
LMCD1-206ENST00000456506 EFEMP2O95967 443 aa13.39□□□□□ -0.27
LMCD1-206ENST00000456506 RPS6KB1P23443 525 aa13.39□□□□□ -0.27
LMCD1-206ENST00000456506 NBL1P41271 181 aa13.39□□□□□ -0.27
LMCD1-206ENST00000456506 ALDH7A1P49419 539 aaKnown RBP13.39□□□□□ -0.27
LMCD1-206ENST00000456506 AFF1P51825 1210 aaKnown RBP13.39□□□□□ -0.27
LMCD1-206ENST00000456506 PTPN14Q15678 1187 aa13.39□□□□□ -0.27
LMCD1-206ENST00000456506 MTERF2Q49AM1 385 aa13.39□□□□□ -0.27
LMCD1-206ENST00000456506 CWF19L1Q69YN2 538 aaKnown RBP13.39□□□□□ -0.27
LMCD1-206ENST00000456506 AGMOQ6ZNB7 445 aa13.39□□□□□ -0.27
LMCD1-206ENST00000456506 KSR1Q8IVT5 923 aa13.39□□□□□ -0.27
LMCD1-206ENST00000456506 BICD2Q8TD16 824 aa13.39□□□□□ -0.27
LMCD1-206ENST00000456506 RSPH1Q8WYR4 309 aa13.39□□□□□ -0.27
LMCD1-206ENST00000456506 ATOH1Q92858 354 aaPredicted RBP13.39□□□□□ -0.27
LMCD1-206ENST00000456506 TMEM169Q96HH4 297 aa13.39□□□□□ -0.27
LMCD1-206ENST00000456506 TEKT3Q9BXF9 490 aa13.39□□□□□ -0.27
LMCD1-206ENST00000456506 IRF2BPLQ9H1B7 796 aa13.39□□□□□ -0.27
LMCD1-206ENST00000456506 IFT122Q9HBG6 1241 aa13.39□□□□□ -0.27
LMCD1-206ENST00000456506 FAM105AQ9NUU6 356 aa13.39□□□□□ -0.27
LMCD1-206ENST00000456506 DZANK1Q9NVP4 752 aa13.39□□□□□ -0.27
LMCD1-206ENST00000456506 SEPT9Q9UHD8 586 aaPredicted RBP13.39□□□□□ -0.27
LMCD1-206ENST00000456506 DMXL1Q9Y485 3027 aa13.38□□□□□ -0.27
LMCD1-206ENST00000456506 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.38□□□□□ -0.27
LMCD1-206ENST00000456506 ZC3H11AO75152 810 aaKnown RBP eCLIP13.38□□□□□ -0.27
LMCD1-206ENST00000456506 CDC45O75419 566 aa13.38□□□□□ -0.27
LMCD1-206ENST00000456506 DDHD2O94830 711 aa13.38□□□□□ -0.27
LMCD1-206ENST00000456506 NPR3P17342 541 aa13.38□□□□□ -0.27
LMCD1-206ENST00000456506 PDIA3P30101 505 aaKnown RBP13.38□□□□□ -0.27
LMCD1-206ENST00000456506 SLC11A1P49279 550 aa13.38□□□□□ -0.27
LMCD1-206ENST00000456506 XKR3Q5GH77 459 aa13.38□□□□□ -0.27
LMCD1-206ENST00000456506 ZNF410Q86VK4 478 aa13.38□□□□□ -0.27
LMCD1-206ENST00000456506 ZNF280BQ86YH2 543 aa13.38□□□□□ -0.27
LMCD1-206ENST00000456506 CCDC148Q8NFR7 591 aa13.38□□□□□ -0.27
LMCD1-206ENST00000456506 TBCKQ8TEA7 893 aa13.38□□□□□ -0.27
LMCD1-206ENST00000456506 JAKMIP1Q96N16 626 aaKnown RBP13.38□□□□□ -0.27
LMCD1-206ENST00000456506 SLC26A6Q9BXS9 759 aa13.38□□□□□ -0.27
LMCD1-206ENST00000456506 GCOM2Q9BZD3 368 aaPredicted RBP13.38□□□□□ -0.27
LMCD1-206ENST00000456506 NCOA5Q9HCD5 579 aaKnown RBP13.38□□□□□ -0.27
LMCD1-206ENST00000456506 SH3GLB2Q9NR46 395 aa13.38□□□□□ -0.27
LMCD1-206ENST00000456506 AGPAT5Q9NUQ2 364 aa13.38□□□□□ -0.27
LMCD1-206ENST00000456506 LIMD1Q9UGP4 676 aa13.38□□□□□ -0.27
LMCD1-206ENST00000456506 TCEAL9Q9UHQ7 104 aa13.38□□□□□ -0.27
LMCD1-206ENST00000456506 NAP1L2Q9ULW6 460 aaPredicted RBP13.38□□□□□ -0.27
LMCD1-206ENST00000456506 NOTCH4Q99466 2003 aa13.38□□□□□ -0.27
LMCD1-206ENST00000456506 PRR23AA6NEV1 266 aa13.37□□□□□ -0.27
LMCD1-206ENST00000456506 EML1O00423 815 aa13.37□□□□□ -0.27
LMCD1-206ENST00000456506 CLCN4P51793 760 aa13.37□□□□□ -0.27
LMCD1-206ENST00000456506 CDC42EP1Q00587 391 aa13.37□□□□□ -0.27
LMCD1-206ENST00000456506 GIT2Q14161 759 aa13.37□□□□□ -0.27
LMCD1-206ENST00000456506 LONRF3Q496Y0 759 aa13.37□□□□□ -0.27
LMCD1-206ENST00000456506 NOMO2Q5JPE7 1267 aa13.37□□□□□ -0.27
LMCD1-206ENST00000456506 UBXN11Q5T124 520 aa13.37□□□□□ -0.27
LMCD1-206ENST00000456506 TWF2Q6IBS0 349 aaKnown RBP13.37□□□□□ -0.27
LMCD1-206ENST00000456506 BLOC1S2Q6QNY1 142 aa13.37□□□□□ -0.27
LMCD1-206ENST00000456506 MIER3Q7Z3K6 550 aa13.37□□□□□ -0.27
LMCD1-206ENST00000456506 MRPL10Q7Z7H8 261 aaKnown RBP13.37□□□□□ -0.27
LMCD1-206ENST00000456506 GPR149Q86SP6 731 aa13.37□□□□□ -0.27
LMCD1-206ENST00000456506 ZBTB33Q86T24 672 aa13.37□□□□□ -0.27
LMCD1-206ENST00000456506 RNF168Q8IYW5 571 aaPredicted RBP13.37□□□□□ -0.27
LMCD1-206ENST00000456506 ZNF579Q8NAF0 562 aaKnown RBP13.37□□□□□ -0.27
LMCD1-206ENST00000456506 TDRD5Q8NAT2 981 aaKnown RBP13.37□□□□□ -0.27
LMCD1-206ENST00000456506 MINDY3Q9H8M7 445 aa13.37□□□□□ -0.27
LMCD1-206ENST00000456506 SUCLA2Q9P2R7 463 aaPredicted RBP13.37□□□□□ -0.27
LMCD1-206ENST00000456506 WRAP73Q9P2S5 460 aaPredicted RBP13.37□□□□□ -0.27
LMCD1-206ENST00000456506 VAV3Q9UKW4 847 aa13.37□□□□□ -0.27
LMCD1-206ENST00000456506 PCDHA4Q9UN74 947 aa13.37□□□□□ -0.27
LMCD1-206ENST00000456506 PIN4Q9Y237 131 aaKnown RBP13.37□□□□□ -0.27
LMCD1-206ENST00000456506 FAM186AA6NE01 2351 aa13.37□□□□□ -0.27
LMCD1-206ENST00000456506 FRYLO94915 3013 aa13.37□□□□□ -0.27
LMCD1-206ENST00000456506 PAPLNO95428 1278 aa13.36□□□□□ -0.27
LMCD1-206ENST00000456506 CNPP09543 421 aaKnown RBP13.36□□□□□ -0.27
LMCD1-206ENST00000456506 SFPQP23246 707 aaKnown RBP eCLIP13.36□□□□□ -0.27
LMCD1-206ENST00000456506 HOXA11P31270 313 aaPredicted RBP13.36□□□□□ -0.27
LMCD1-206ENST00000456506 RAB27AP51159 221 aa13.36□□□□□ -0.27
LMCD1-206ENST00000456506 CLCN5P51795 746 aa13.36□□□□□ -0.27
LMCD1-206ENST00000456506 TOB2Q14106 344 aaPredicted RBP13.36□□□□□ -0.27
LMCD1-206ENST00000456506 ATAT1Q5SQI0 421 aa13.36□□□□□ -0.27
LMCD1-206ENST00000456506 PLA2G4FQ68DD2 849 aa13.36□□□□□ -0.27
LMCD1-206ENST00000456506 ASTLQ6HA08 431 aaPredicted RBP13.36□□□□□ -0.27
LMCD1-206ENST00000456506 MOXD1Q6UVY6 613 aa13.36□□□□□ -0.27
LMCD1-206ENST00000456506 GLB1LQ6UWU2 654 aa13.36□□□□□ -0.27
LMCD1-206ENST00000456506 TMC5Q6UXY8 1006 aa13.36□□□□□ -0.27
LMCD1-206ENST00000456506 RHPN2Q8IUC4 686 aa13.36□□□□□ -0.27
LMCD1-206ENST00000456506 DAGLBQ8NCG7 672 aa13.36□□□□□ -0.27
LMCD1-206ENST00000456506 SCLT1Q96NL6 688 aa13.36□□□□□ -0.27
LMCD1-206ENST00000456506 KLHL5Q96PQ7 755 aa13.36□□□□□ -0.27
LMCD1-206ENST00000456506 SFXN1Q9H9B4 322 aa13.36□□□□□ -0.27
LMCD1-206ENST00000456506 MARCH5Q9NX47 278 aa13.36□□□□□ -0.27
LMCD1-206ENST00000456506 PCDHB2Q9Y5E7 798 aa13.36□□□□□ -0.27
LMCD1-206ENST00000456506 COL4A3Q01955 1670 aa13.36□□□□□ -0.27
LMCD1-206ENST00000456506 SLC37A4O43826 429 aa13.35□□□□□ -0.27
LMCD1-206ENST00000456506 N4BP1O75113 896 aaKnown RBP13.35□□□□□ -0.27
LMCD1-206ENST00000456506 SKIP12755 728 aa13.35□□□□□ -0.27
LMCD1-206ENST00000456506 CCT2P78371 535 aaKnown RBP13.35□□□□□ -0.27
LMCD1-206ENST00000456506 FGD1P98174 961 aa13.35□□□□□ -0.27
LMCD1-206ENST00000456506 PLCD3Q8N3E9 789 aa13.35□□□□□ -0.27
LMCD1-206ENST00000456506 DHX33Q9H6R0 707 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms