RNA–Protein interactions for RNA: ENST00000456079.1

PLOD3-207, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-207ENST00000456079 SYT2Q8N9I0 419 aaPredicted RBP16.51■□□□□ 0.23
PLOD3-207ENST00000456079 CCDC43Q96MW1 224 aaKnown RBP16.51■□□□□ 0.23
PLOD3-207ENST00000456079 YME1L1Q96TA2 773 aa16.51■□□□□ 0.23
PLOD3-207ENST00000456079 AGPAT5Q9NUQ2 364 aa16.51■□□□□ 0.23
PLOD3-207ENST00000456079 POU5F1BQ06416 359 aa16.5■□□□□ 0.23
PLOD3-207ENST00000456079 RAD51AP2Q09MP3 1159 aa16.5■□□□□ 0.23
PLOD3-207ENST00000456079 MCM6Q14566 821 aa16.5■□□□□ 0.23
PLOD3-207ENST00000456079 LONRF3Q496Y0 759 aa16.5■□□□□ 0.23
PLOD3-207ENST00000456079 AXDND1Q5T1B0 1012 aaPredicted RBP16.5■□□□□ 0.23
PLOD3-207ENST00000456079 CDCA2Q69YH5 1023 aaPredicted RBP16.5■□□□□ 0.23
PLOD3-207ENST00000456079 CATSPER4Q7RTX7 472 aa16.5■□□□□ 0.23
PLOD3-207ENST00000456079 SRGAP1Q7Z6B7 1085 aa16.5■□□□□ 0.23
PLOD3-207ENST00000456079 CDR2LQ86X02 465 aaPredicted RBP16.5■□□□□ 0.23
PLOD3-207ENST00000456079 ECHDC2Q86YB7 292 aa16.5■□□□□ 0.23
PLOD3-207ENST00000456079 MCPH1Q8NEM0 835 aa16.5■□□□□ 0.23
PLOD3-207ENST00000456079 ARNTL2Q8WYA1 636 aa16.5■□□□□ 0.23
PLOD3-207ENST00000456079 CPB2Q96IY4 423 aa16.5■□□□□ 0.23
PLOD3-207ENST00000456079 CCSER1Q9C0I3 900 aa16.5■□□□□ 0.23
PLOD3-207ENST00000456079 PIN4Q9Y237 131 aaKnown RBP16.5■□□□□ 0.23
PLOD3-207ENST00000456079 STK24Q9Y6E0 443 aa16.5■□□□□ 0.23
PLOD3-207ENST00000456079 MYH15Q9Y2K3 1946 aa16.5■□□□□ 0.23
PLOD3-207ENST00000456079 VCANP13611 3396 aa16.5■□□□□ 0.23
PLOD3-207ENST00000456079 A0A0U1RQF3 1178 aa16.49■□□□□ 0.23
PLOD3-207ENST00000456079 SPTLC2O15270 562 aa16.49■□□□□ 0.23
PLOD3-207ENST00000456079 HIP1RO75146 1068 aa16.49■□□□□ 0.23
PLOD3-207ENST00000456079 SFPQP23246 707 aaKnown RBP eCLIP16.49■□□□□ 0.23
PLOD3-207ENST00000456079 UBA7P41226 1012 aa16.49■□□□□ 0.23
PLOD3-207ENST00000456079 AFF1P51825 1210 aaKnown RBP16.49■□□□□ 0.23
PLOD3-207ENST00000456079 ERVK-21P61565 698 aa16.49■□□□□ 0.23
PLOD3-207ENST00000456079 PAN2Q504Q3 1202 aaKnown RBP16.49■□□□□ 0.23
PLOD3-207ENST00000456079 CLLU1OSQ5K130 101 aa16.49■□□□□ 0.23
PLOD3-207ENST00000456079 LRRC55Q6ZSA7 311 aa16.49■□□□□ 0.23
PLOD3-207ENST00000456079 TAS1R3Q7RTX0 852 aa16.49■□□□□ 0.23
PLOD3-207ENST00000456079 LPPQ93052 612 aa16.49■□□□□ 0.23
PLOD3-207ENST00000456079 EIF2AQ9BY44 585 aaKnown RBP16.49■□□□□ 0.23
PLOD3-207ENST00000456079 NFKBIZQ9BYH8 718 aa16.49■□□□□ 0.23
PLOD3-207ENST00000456079 PANK2Q9BZ23 570 aa16.49■□□□□ 0.23
PLOD3-207ENST00000456079 CCDC113Q9H0I3 377 aa16.49■□□□□ 0.23
PLOD3-207ENST00000456079 C1orf112Q9NSG2 853 aa16.49■□□□□ 0.23
PLOD3-207ENST00000456079 MRPL42Q9Y6G3 142 aaKnown RBP16.49■□□□□ 0.23
PLOD3-207ENST00000456079 LRRIQ4A6NIV6 560 aa16.48■□□□□ 0.23
PLOD3-207ENST00000456079 INO80B-WBP1J3KQ70 363 aa16.48■□□□□ 0.23
PLOD3-207ENST00000456079 SSBP05455 408 aaKnown RBP eCLIP16.48■□□□□ 0.23
PLOD3-207ENST00000456079 PHKA2P46019 1235 aa16.48■□□□□ 0.23
PLOD3-207ENST00000456079 DHX8Q14562 1220 aaKnown RBP16.48■□□□□ 0.23
PLOD3-207ENST00000456079 STK38Q15208 465 aa16.48■□□□□ 0.23
PLOD3-207ENST00000456079 SHC4Q6S5L8 630 aa16.48■□□□□ 0.23
PLOD3-207ENST00000456079 KRI1Q8N9T8 703 aaKnown RBP16.48■□□□□ 0.23
PLOD3-207ENST00000456079 GDPD5Q8WTR4 605 aa16.48■□□□□ 0.23
PLOD3-207ENST00000456079 RAD54LQ92698 747 aa16.48■□□□□ 0.23
PLOD3-207ENST00000456079 ZNF396Q96N95 335 aaPredicted RBP16.48■□□□□ 0.23
PLOD3-207ENST00000456079 CASD1Q96PB1 797 aa16.48■□□□□ 0.23
PLOD3-207ENST00000456079 TRAIPQ9BWF2 469 aa16.48■□□□□ 0.23
PLOD3-207ENST00000456079 INO80BQ9C086 356 aaPredicted RBP16.48■□□□□ 0.23
PLOD3-207ENST00000456079 RNF39Q9H2S5 420 aa16.48■□□□□ 0.23
PLOD3-207ENST00000456079 FZD8Q9H461 694 aa16.48■□□□□ 0.23
PLOD3-207ENST00000456079 CHST12Q9NRB3 414 aa16.48■□□□□ 0.23
PLOD3-207ENST00000456079 TMEM161AQ9NX61 479 aa16.48■□□□□ 0.23
PLOD3-207ENST00000456079 PCDHB7Q9Y5E2 793 aa16.48■□□□□ 0.23
PLOD3-207ENST00000456079 YEATS4O95619 227 aa16.47■□□□□ 0.23
PLOD3-207ENST00000456079 ZSCAN20P17040 1043 aaPredicted RBP16.47■□□□□ 0.23
PLOD3-207ENST00000456079 ARF4P18085 180 aaPredicted RBP16.47■□□□□ 0.23
PLOD3-207ENST00000456079 GUCY2CP25092 1073 aa16.47■□□□□ 0.23
PLOD3-207ENST00000456079 TFDP1Q14186 410 aa16.47■□□□□ 0.23
PLOD3-207ENST00000456079 EPC2Q52LR7 807 aa16.47■□□□□ 0.23
PLOD3-207ENST00000456079 ODR4Q5SWX8 454 aa16.47■□□□□ 0.23
PLOD3-207ENST00000456079 SMG8Q8ND04 991 aaKnown RBP16.47■□□□□ 0.23
PLOD3-207ENST00000456079 CLP1Q92989 425 aaKnown RBP16.47■□□□□ 0.23
PLOD3-207ENST00000456079 TGS1Q96RS0 853 aaKnown RBP16.47■□□□□ 0.23
PLOD3-207ENST00000456079 NT5C3AQ9H0P0 336 aa16.47■□□□□ 0.23
PLOD3-207ENST00000456079 ELAC1Q9H777 363 aaKnown RBP16.47■□□□□ 0.23
PLOD3-207ENST00000456079 PCDHA7Q9UN72 937 aa16.47■□□□□ 0.23
PLOD3-207ENST00000456079 STXBP5LQ9Y2K9 1186 aa16.47■□□□□ 0.23
PLOD3-207ENST00000456079 TBKBP1A7MCY6 615 aa16.46■□□□□ 0.23
PLOD3-207ENST00000456079 B4GALT3O60512 393 aa16.46■□□□□ 0.23
PLOD3-207ENST00000456079 PPP6R2O75170 966 aa16.46■□□□□ 0.23
PLOD3-207ENST00000456079 NAMPTP43490 491 aa16.46■□□□□ 0.23
PLOD3-207ENST00000456079 NPTX2P47972 431 aa16.46■□□□□ 0.23
PLOD3-207ENST00000456079 PEX3P56589 373 aa16.46■□□□□ 0.23
PLOD3-207ENST00000456079 BTG3Q14201 252 aaPredicted RBP16.46■□□□□ 0.23
PLOD3-207ENST00000456079 AGMOQ6ZNB7 445 aa16.46■□□□□ 0.23
PLOD3-207ENST00000456079 RNF169Q8NCN4 708 aa16.46■□□□□ 0.23
PLOD3-207ENST00000456079 CALML4Q96GE6 196 aa16.46■□□□□ 0.23
PLOD3-207ENST00000456079 CDK5RAP3Q96JB5 506 aa16.46■□□□□ 0.23
PLOD3-207ENST00000456079 CXCL16Q9H2A7 254 aa16.46■□□□□ 0.23
PLOD3-207ENST00000456079 CWH43Q9H720 699 aa16.46■□□□□ 0.23
PLOD3-207ENST00000456079 FAM105AQ9NUU6 356 aa16.46■□□□□ 0.23
PLOD3-207ENST00000456079 RCOR1Q9UKL0 485 aa16.46■□□□□ 0.23
PLOD3-207ENST00000456079 HES2Q9Y543 173 aa16.46■□□□□ 0.23
PLOD3-207ENST00000456079 PRRC2BQ5JSZ5 2229 aaKnown RBP16.46■□□□□ 0.23
PLOD3-207ENST00000456079 SLC26A4O43511 780 aa16.45■□□□□ 0.22
PLOD3-207ENST00000456079 STAG3L1P0CL83 205 aa16.45■□□□□ 0.22
PLOD3-207ENST00000456079 GIT2Q14161 759 aa16.45■□□□□ 0.22
PLOD3-207ENST00000456079 BECN1Q14457 450 aa16.45■□□□□ 0.22
PLOD3-207ENST00000456079 NT5DC1Q5TFE4 455 aa16.45■□□□□ 0.22
PLOD3-207ENST00000456079 EEF1DP3Q658K8 133 aa16.45■□□□□ 0.22
PLOD3-207ENST00000456079 TWF2Q6IBS0 349 aaKnown RBP16.45■□□□□ 0.22
PLOD3-207ENST00000456079 PPP4R3CPQ6ZMV5 832 aa16.45■□□□□ 0.22
PLOD3-207ENST00000456079 MRPL10Q7Z7H8 261 aaKnown RBP16.45■□□□□ 0.22
PLOD3-207ENST00000456079 GPBP1Q86WP2 473 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms