RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 TINF2Q9BSI4 451 aa3.51□□□□□ -1.85
LINC02540-201ENST00000455554 DHRS4Q9BTZ2 278 aa3.51□□□□□ -1.85
LINC02540-201ENST00000455554 ANKFY1Q9P2R3 1169 aa3.51□□□□□ -1.85
LINC02540-201ENST00000455554 ARHGEF17Q96PE2 2063 aaPredicted RBP3.51□□□□□ -1.85
LINC02540-201ENST00000455554 TMEM200CA6NKL6 621 aa3.5□□□□□ -1.85
LINC02540-201ENST00000455554 PDPK1O15530 556 aa3.5□□□□□ -1.85
LINC02540-201ENST00000455554 EFCAB14O75071 495 aa3.5□□□□□ -1.85
LINC02540-201ENST00000455554 ZBTB48P10074 688 aaPredicted RBP3.5□□□□□ -1.85
LINC02540-201ENST00000455554 HNRNPLP14866 589 aaKnown RBP eCLIP3.5□□□□□ -1.85
LINC02540-201ENST00000455554 FAM189BP81408 668 aa3.5□□□□□ -1.85
LINC02540-201ENST00000455554 ERCC6LQ2NKX8 1250 aa3.5□□□□□ -1.85
LINC02540-201ENST00000455554 FAM214AQ32MH5 1076 aa3.5□□□□□ -1.85
LINC02540-201ENST00000455554 MTERF2Q49AM1 385 aa3.5□□□□□ -1.85
LINC02540-201ENST00000455554 PRR16Q569H4 304 aa3.5□□□□□ -1.85
LINC02540-201ENST00000455554 METTL24Q5JXM2 366 aa3.5□□□□□ -1.85
LINC02540-201ENST00000455554 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
LINC02540-201ENST00000455554 HDGFL2Q7Z4V5 671 aaPredicted RBP3.5□□□□□ -1.85
LINC02540-201ENST00000455554 NPM2Q86SE8 214 aaKnown RBP3.5□□□□□ -1.85
LINC02540-201ENST00000455554 ARHGEF19Q8IW93 802 aa3.5□□□□□ -1.85
LINC02540-201ENST00000455554 CPPED1Q9BRF8 314 aaPredicted RBP3.5□□□□□ -1.85
LINC02540-201ENST00000455554 BOCQ9BWV1 1114 aa3.5□□□□□ -1.85
LINC02540-201ENST00000455554 TRIM55Q9BYV6 548 aa3.5□□□□□ -1.85
LINC02540-201ENST00000455554 HAPLN2Q9GZV7 340 aa3.5□□□□□ -1.85
LINC02540-201ENST00000455554 SLC52A2Q9HAB3 445 aa3.5□□□□□ -1.85
LINC02540-201ENST00000455554 SYBUQ9NX95 663 aa3.5□□□□□ -1.85
LINC02540-201ENST00000455554 NDOR1Q9UHB4 597 aa3.5□□□□□ -1.85
LINC02540-201ENST00000455554 PFDN2Q9UHV9 154 aa3.5□□□□□ -1.85
LINC02540-201ENST00000455554 MRPS23Q9Y3D9 190 aaKnown RBP3.5□□□□□ -1.85
LINC02540-201ENST00000455554 COL11A2P13942 1736 aaPredicted RBP3.5□□□□□ -1.85
LINC02540-201ENST00000455554 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.49□□□□□ -1.85
LINC02540-201ENST00000455554 UBA6A0AVT1 1052 aaPredicted RBP3.49□□□□□ -1.85
LINC02540-201ENST00000455554 RNASET2O00584 256 aaKnown RBP3.49□□□□□ -1.85
LINC02540-201ENST00000455554 ZNF185O15231 689 aa3.49□□□□□ -1.85
LINC02540-201ENST00000455554 HOXA3O43365 443 aaPredicted RBP3.49□□□□□ -1.85
LINC02540-201ENST00000455554 APOBEC3AP31941 199 aaPredicted RBP3.49□□□□□ -1.85
LINC02540-201ENST00000455554 ELLP55199 621 aaPredicted RBP3.49□□□□□ -1.85
LINC02540-201ENST00000455554 RASGRF1Q13972 1273 aa3.49□□□□□ -1.85
LINC02540-201ENST00000455554 VPS72Q15906 364 aa3.49□□□□□ -1.85
LINC02540-201ENST00000455554 TMEM177Q53S58 311 aa3.49□□□□□ -1.85
LINC02540-201ENST00000455554 TTC38Q5R3I4 469 aa3.49□□□□□ -1.85
LINC02540-201ENST00000455554 PRAMEF9Q5VWM5 478 aa3.49□□□□□ -1.85
LINC02540-201ENST00000455554 CMTR2Q8IYT2 770 aaKnown RBP3.49□□□□□ -1.85
LINC02540-201ENST00000455554 GLB1L3Q8NCI6 653 aaPredicted RBP3.49□□□□□ -1.85
LINC02540-201ENST00000455554 GSTCDQ8NEC7 633 aa3.49□□□□□ -1.85
LINC02540-201ENST00000455554 OR52N2Q8NGI0 321 aa3.49□□□□□ -1.85
LINC02540-201ENST00000455554 RPGRQ92834 1020 aaKnown RBP3.49□□□□□ -1.85
LINC02540-201ENST00000455554 CAVIN3Q969G5 261 aa3.49□□□□□ -1.85
LINC02540-201ENST00000455554 MAGEB10Q96LZ2 347 aaPredicted RBP3.49□□□□□ -1.85
LINC02540-201ENST00000455554 COQ10AQ96MF6 247 aa3.49□□□□□ -1.85
LINC02540-201ENST00000455554 PDCD2LQ9BRP1 358 aa3.49□□□□□ -1.85
LINC02540-201ENST00000455554 NDC1Q9BTX1 674 aa3.49□□□□□ -1.85
LINC02540-201ENST00000455554 EPC1Q9H2F5 836 aa3.49□□□□□ -1.85
LINC02540-201ENST00000455554 TRPM5Q9NZQ8 1165 aa3.49□□□□□ -1.85
LINC02540-201ENST00000455554 SYNPO2Q9UMS6 1093 aa3.49□□□□□ -1.85
LINC02540-201ENST00000455554 MSRB2Q9Y3D2 182 aa3.49□□□□□ -1.85
LINC02540-201ENST00000455554 EPN1Q9Y6I3 576 aaPredicted RBP3.49□□□□□ -1.85
LINC02540-201ENST00000455554 PROB1E7EW31 1015 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 NRP1O14786 923 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 DIAPH1O60610 1272 aaKnown RBP3.48□□□□□ -1.85
LINC02540-201ENST00000455554 NPTXRO95502 500 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 C1RP00736 705 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 CFBP00751 764 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 FAM153BP0C7A2 387 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 HKR1P10072 659 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 CXCR5P32302 372 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 KIF11P52732 1056 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 SEC24CP53992 1094 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 BCAR1P56945 870 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 MICALCLQ6ZW33 695 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 OTOP1Q7RTM1 612 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 GDF7Q7Z4P5 450 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 LILRA3Q8N6C8 439 aaPredicted RBP3.48□□□□□ -1.85
LINC02540-201ENST00000455554 IGSF22Q8N9C0 903 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 BOLLQ8N9W6 283 aaKnown RBP3.48□□□□□ -1.85
LINC02540-201ENST00000455554 SIMC1Q8NDZ2 872 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 LINC00476Q8WZB0 136 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 UIMC1Q96RL1 719 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 TUBGCP5Q96RT8 1024 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 DCLRE1CQ96SD1 692 aaKnown RBP3.48□□□□□ -1.85
LINC02540-201ENST00000455554 GMLQ99445 158 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 SPATA5L1Q9BVQ7 753 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 CPEB1Q9BZB8 566 aaKnown RBP3.48□□□□□ -1.85
LINC02540-201ENST00000455554 AKIP1Q9NQ31 210 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 TESQ9UGI8 421 aaKnown RBP3.48□□□□□ -1.85
LINC02540-201ENST00000455554 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.48□□□□□ -1.85
LINC02540-201ENST00000455554 FRMD4BQ9Y2L6 1034 aa3.48□□□□□ -1.85
LINC02540-201ENST00000455554 GAGE12BA1L429 117 aa3.47□□□□□ -1.85
LINC02540-201ENST00000455554 GAGE12HA6NDE8 117 aa3.47□□□□□ -1.85
LINC02540-201ENST00000455554 DNAJC6O75061 913 aa3.47□□□□□ -1.85
LINC02540-201ENST00000455554 KRT37O76014 449 aa3.47□□□□□ -1.85
LINC02540-201ENST00000455554 NCR1O76036 304 aa3.47□□□□□ -1.85
LINC02540-201ENST00000455554 NDUFA10O95299 355 aa3.47□□□□□ -1.85
LINC02540-201ENST00000455554 MAN2A1Q16706 1144 aa3.47□□□□□ -1.85
LINC02540-201ENST00000455554 ARHGAP44Q17R89 818 aa3.47□□□□□ -1.85
LINC02540-201ENST00000455554 LONRF2Q1L5Z9 754 aa3.47□□□□□ -1.85
LINC02540-201ENST00000455554 SP5Q6BEB4 398 aaPredicted RBP3.47□□□□□ -1.85
LINC02540-201ENST00000455554 ABHD17CQ6PCB6 329 aa3.47□□□□□ -1.85
LINC02540-201ENST00000455554 FAM83AQ86UY5 434 aa3.47□□□□□ -1.85
LINC02540-201ENST00000455554 FAM98AQ8NCA5 519 aaKnown RBP3.47□□□□□ -1.85
LINC02540-201ENST00000455554 LRFN3Q9BTN0 628 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms