RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 MRPS25P82663 173 aaKnown RBP13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 CETN1Q12798 172 aa13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 TKFCQ3LXA3 575 aa13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 MSL1Q68DK7 614 aa13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 PHLDB3Q6NSJ2 640 aa13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 FOXR1Q6PIV2 292 aa13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 SPATS2Q86XZ4 545 aaKnown RBP13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 GLYCTKQ8IVS8 523 aa13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 PRPF38AQ8NAV1 312 aaKnown RBP13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 IFT81Q8WYA0 676 aa13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 AGPAT1Q99943 283 aa13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 MAF1Q9H063 256 aa13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 KCNH7Q9NS40 1196 aa13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 ANKEF1Q9NU02 776 aa13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 WDR81Q562E7 1941 aa13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 ESYT3A0FGR9 886 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 FDX1P10109 184 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 MAGEA9P43362 315 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 QARSP47897 775 aaKnown RBP13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 CYP2J2P51589 502 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 VAMP7P51809 220 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 NCKAP1LP55160 1127 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 BIRC3Q13489 604 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 C1orf220Q5T0J3 134 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 AGBL2Q5U5Z8 902 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 XRRA1Q6P2D8 792 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 KLHL7Q8IXQ5 586 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 OGFOD1Q8N543 542 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 BANK1Q8NDB2 785 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 RPS6KC1Q96S38 1066 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 TXLNGYQ9BZA5 131 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 KIAA1683Q9H0B3 1180 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 IKZF4Q9H2S9 585 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 LCMT1Q9UIC8 334 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 GGA2Q9UJY4 613 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 COQ4Q9Y3A0 265 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 ZHX2Q9Y6X8 837 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 ARID2Q68CP9 1835 aa13.56□□□□□ -0.24
ECHDC1-209ENST00000454591 TMCO5BA8MYB1 307 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 K7ENM7 598 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 GGPS1O95749 300 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 CPP00450 1065 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 TRIM49P0CI25 452 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 TRIM49CP0CI26 452 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 GNGT1P63211 74 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 DHX34Q14147 1143 aaKnown RBP13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 UAP1Q16222 522 aaPredicted RBP13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 SYCP3Q8IZU3 236 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 ARFGAP2Q8N6H7 521 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 XXYLT1Q8NBI6 393 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 C3orf20Q8ND61 904 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 KCNN1Q92952 543 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 HINFPQ9BQA5 517 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 SENP7Q9BQF6 1050 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 RAB17Q9H0T7 212 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 RASSF4Q9H2L5 321 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 COL20A1Q9P218 1284 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 CCPG1Q9ULG6 757 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 PLAAQ9Y263 795 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 IGSF9BQ9UPX0 1349 aa13.55□□□□□ -0.24
ECHDC1-209ENST00000454591 CLRN2A0PK11 232 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 PHF20L1A8MW92 1017 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 FOXN3O00409 490 aaPredicted RBP13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 RTN2O75298 545 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 KRT14P02533 472 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 NR1D1P20393 614 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 SFNP31947 248 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 GBP1P32455 592 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 HSD17B3P37058 310 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 JAK3P52333 1124 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 ITGB3BPQ13352 177 aaPredicted RBP13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 RASA3Q14644 834 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 DCAF12L1Q5VU92 463 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 ZNF772Q68DY9 489 aaPredicted RBP13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 SLC30A10Q6XR72 485 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 RUFY4Q6ZNE9 571 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 KSR1Q8IVT5 923 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 TMC2Q8TDI7 906 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 FAM129AQ9BZQ8 928 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 GOLPH3Q9H4A6 298 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 SLC38A10Q9HBR0 1119 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 POLD4Q9HCU8 107 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 FBXO28Q9NVF7 368 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 RSPH14Q9UHP6 348 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 PPP1R9AQ9ULJ8 1098 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 ASTN2O75129 1339 aaPredicted RBP13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 EMSYQ7Z589 1322 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 SYNGAP1Q96PV0 1343 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 PPFIA2O75334 1257 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 VCAM1P19320 739 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 INPP5BP32019 993 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 GTF2H1P32780 548 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 GUCY2FP51841 1108 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 EIF3BP55884 814 aaKnown RBP13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 UBXN2AP68543 259 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 MRPS9P82933 396 aaKnown RBP13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 TRADDQ15628 312 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 DUPD1Q68J44 220 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 TMC3Q7Z5M5 1100 aa13.54□□□□□ -0.24
ECHDC1-209ENST00000454591 FAM71AQ8IYT1 594 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms