RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 EMBQ6PCB8 327 aa10.78□□□□□ -0.68
CSGALNACT1-203ENST00000454498 RASGRP2Q7LDG7 609 aa10.78□□□□□ -0.68
CSGALNACT1-203ENST00000454498 SIX6OS1Q8N1H7 587 aa10.78□□□□□ -0.68
CSGALNACT1-203ENST00000454498 KCTD6Q8NC69 237 aa10.78□□□□□ -0.68
CSGALNACT1-203ENST00000454498 WHAMMQ8TF30 809 aa10.78□□□□□ -0.68
CSGALNACT1-203ENST00000454498 OSBPL9Q96SU4 736 aa10.78□□□□□ -0.68
CSGALNACT1-203ENST00000454498 LRRC4BQ9NT99 713 aa10.78□□□□□ -0.68
CSGALNACT1-203ENST00000454498 KBTBD4Q9NVX7 518 aa10.78□□□□□ -0.68
CSGALNACT1-203ENST00000454498 PSMA2P25787 234 aa10.78□□□□□ -0.68
CSGALNACT1-203ENST00000454498 GPC3P51654 580 aa10.78□□□□□ -0.68
CSGALNACT1-203ENST00000454498 CDO1Q16878 200 aa10.78□□□□□ -0.68
CSGALNACT1-203ENST00000454498 EARS2Q5JPH6 523 aaKnown RBP10.78□□□□□ -0.68
CSGALNACT1-203ENST00000454498 RAD9BQ6WBX8 426 aa10.78□□□□□ -0.68
CSGALNACT1-203ENST00000454498 DSTYKQ6XUX3 929 aa10.78□□□□□ -0.68
CSGALNACT1-203ENST00000454498 ENOSF1Q7L5Y1 443 aa10.78□□□□□ -0.68
CSGALNACT1-203ENST00000454498 FUCA2Q9BTY2 467 aa10.78□□□□□ -0.68
CSGALNACT1-203ENST00000454498 MTFR1LQ9H019 292 aa10.78□□□□□ -0.68
CSGALNACT1-203ENST00000454498 SSU72P8A0A1W2PR75 194 aa10.77□□□□□ -0.68
CSGALNACT1-203ENST00000454498 SLC16A3O15427 465 aaKnown RBP10.77□□□□□ -0.68
CSGALNACT1-203ENST00000454498 ACTN1P12814 892 aa10.77□□□□□ -0.68
CSGALNACT1-203ENST00000454498 PLS3P13797 630 aa10.77□□□□□ -0.68
CSGALNACT1-203ENST00000454498 ZNF18P17022 549 aa10.77□□□□□ -0.68
CSGALNACT1-203ENST00000454498 ARHGAP25P42331 645 aa10.77□□□□□ -0.68
CSGALNACT1-203ENST00000454498 IFNAR2P48551 515 aa10.77□□□□□ -0.68
CSGALNACT1-203ENST00000454498 FMO5P49326 533 aa10.77□□□□□ -0.68
CSGALNACT1-203ENST00000454498 BASP1P80723 227 aaKnown RBP10.77□□□□□ -0.68
CSGALNACT1-203ENST00000454498 RIC1Q4ADV7 1423 aa10.77□□□□□ -0.68
CSGALNACT1-203ENST00000454498 APOBEC3HQ6NTF7 200 aaKnown RBP10.77□□□□□ -0.68
CSGALNACT1-203ENST00000454498 SYNGAP1Q96PV0 1343 aa10.77□□□□□ -0.68
CSGALNACT1-203ENST00000454498 GINM1Q9NU53 330 aa10.77□□□□□ -0.68
CSGALNACT1-203ENST00000454498 PACSIN2Q9UNF0 486 aaPredicted RBP10.77□□□□□ -0.68
CSGALNACT1-203ENST00000454498 GIPC1O14908 333 aa10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 SLC9A1P19634 815 aa10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 SREBF1P36956 1147 aa10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 ACOT2P49753 483 aa10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 PRKCEQ02156 737 aa10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 GRIK5Q16478 980 aa10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 DACT2Q5SW24 774 aa10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 PNMA8AQ86V59 439 aaPredicted RBP10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 KSR1Q8IVT5 923 aa10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 ANKRD13AQ8IZ07 590 aa10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 CACNA2D3Q8IZS8 1091 aa10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 KCTD17Q8N5Z5 321 aa10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 SYT2Q8N9I0 419 aaPredicted RBP10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 RAB3IL1Q8TBN0 382 aa10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 RFFLQ8WZ73 363 aa10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 POLR3CQ9BUI4 534 aaPredicted RBP10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 ARHGEF37A1IGU5 675 aa10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 PPP2R5CQ13362 524 aa10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 ZNF211Q13398 564 aaPredicted RBP10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 SLC18A3Q16572 532 aa10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 MOXD1Q6UVY6 613 aa10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 ZNF564Q8TBZ8 553 aaPredicted RBP10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 INTS9Q9NV88 658 aaKnown RBP10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 IFT172Q9UG01 1749 aa10.77□□□□□ -0.69
CSGALNACT1-203ENST00000454498 CD44P16070 742 aaKnown RBP10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 GNA15P30679 374 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 PSMC4P43686 418 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 ZNF131P52739 623 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 TGFB2P61812 414 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 ITKQ08881 620 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 TTC31Q49AM3 519 aaPredicted RBP10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 GKAP1Q5VSY0 366 aaPredicted RBP10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 TTC19Q6DKK2 380 aaPredicted RBP10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 XRRA1Q6P2D8 792 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 HEMGNQ9BXL5 484 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 MOV10L1Q9BXT6 1211 aaKnown RBP10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 EPC1Q9H2F5 836 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 RASSF4Q9H2L5 321 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 SNX24Q9Y343 169 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 CYP26A1O43174 497 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 MED24O75448 989 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 ATP1A1P05023 1023 aaKnown RBP10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 INHBAP08476 426 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 SLCO1A2P46721 670 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 SNAPC2Q13487 334 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 DARS2Q6PI48 645 aaKnown RBP10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 FAM83AQ86UY5 434 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 DDX47Q9H0S4 455 aaKnown RBP10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 ZWILCHQ9H900 591 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 APEX2Q9UBZ4 518 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 LRFN2Q9ULH4 789 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 PRKCBP05771 671 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 CIITAP33076 1130 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 BACE1P56817 501 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 CUL1Q13616 776 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 SLMAPQ14BN4 828 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 SNRNP35Q16560 246 aaKnown RBP10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 GLE1Q53GS7 698 aaKnown RBP10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 PPP6R3Q5H9R7 873 aaPredicted RBP10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 NBPF12Q5TAG4 269 aaPredicted RBP10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 KIAA1841Q6NSI8 718 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 NUP85Q9BW27 656 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 KCNQ5Q9NR82 932 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 CYTH3O43739 400 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 LPXNO60711 386 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 CALB1P05937 261 aa10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 TROVE2P10155 538 aaKnown RBP eCLIP10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 ILDR1Q86SU0 546 aaPredicted RBP10.76□□□□□ -0.69
CSGALNACT1-203ENST00000454498 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms