RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 WRAP73Q9P2S5 460 aaPredicted RBP6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CEP131Q9UPN4 1083 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CHD8Q9HCK8 2581 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ACACBO00763 2458 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 A0A0U1RQF3 1178 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 FAM205CA6NFA0 338 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 EML1O00423 815 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 MAGEB2O15479 319 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 RFPL2O75678 378 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 DDHD2O94830 711 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 EOMESO95936 686 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 POMCP01189 267 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CFHP08603 1231 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CNPP09543 421 aaKnown RBP6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 SPATA31D3P0C874 917 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 NPR3P17342 541 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 SFPQP23246 707 aaKnown RBP eCLIP6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 TMOD1P28289 359 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 MLH1P40692 756 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 STK3Q13188 491 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 TARBP2Q15633 366 aaKnown RBP6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 NPY5RQ15761 445 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 NOMO2Q5JPE7 1267 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 RNF20Q5VTR2 975 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ASTLQ6HA08 431 aaPredicted RBP6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 PDE12Q6L8Q7 609 aaKnown RBP6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 SPATA31D4Q6ZUB0 917 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CCDC149Q6ZUS6 474 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CATSPER4Q7RTX7 472 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 MIER3Q7Z3K6 550 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 TMEM87AQ8NBN3 555 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 TBCKQ8TEA7 893 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 SLC22A17Q8WUG5 538 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 SLC5A5Q92911 643 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 TMEM143Q96AN5 459 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 APOL6Q9BWW8 343 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 TEKT3Q9BXF9 490 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 MRPL9Q9BYD2 267 aaKnown RBP6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 SFXN1Q9H9B4 322 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 C6orf50Q9HD87 102 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 MAN1C1Q9NR34 630 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 GJB4Q9NTQ9 266 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 TBC1D22BQ9NU19 505 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 FAM105AQ9NUU6 356 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 MARCH5Q9NX47 278 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 SUCLA2Q9P2R7 463 aaPredicted RBP6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 FBXL21Q9UKT6 434 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CA14Q9ULX7 337 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 HES2Q9Y543 173 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 R4GN57 208 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CACNA1IQ9P0X4 2223 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 TDRD15B5MCY1 1934 aaKnown RBP6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 MYH15Q9Y2K3 1946 aa6.74□□□□□ -1.33
HLA-DPA3-207ENST00000454398 MAP1BP46821 2468 aaKnown RBP6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 FSD2A1L4K1 749 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 DDX11L8A8MPP1 907 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 LRRN2O75325 713 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CDC45O75419 566 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 OFD1O75665 1012 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 PSMD10O75832 226 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 GALTP07902 379 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CTSAP10619 480 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 RPL17P18621 184 aaKnown RBP6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CIITAP33076 1130 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 MTHFRP42898 656 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CLCN4P51793 760 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 JAK3P52333 1124 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 FOSBP53539 338 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 AK2P54819 239 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 FOXK2Q01167 660 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CYP4A11Q02928 519 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ITIH3Q06033 890 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 NTRK3Q16288 839 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 INF2Q27J81 1249 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 BMP2KLQ5H9B9 411 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 SPECC1Q5M775 1068 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ODR4Q5SWX8 454 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 UBXN11Q5T124 520 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 B3GNT9Q6UX72 402 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 AGMOQ6ZNB7 445 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ANO5Q75V66 913 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 GET4Q7L5D6 327 aaPredicted RBP6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 TAS1R1Q7RTX1 841 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CDR2LQ86X02 465 aaPredicted RBP6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 UBALD2Q8IYN6 164 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ADSSL1Q8N142 457 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ETNPPLQ8TBG4 499 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 HASPINQ8TF76 798 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CPB2Q96IY4 423 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ZFP42Q96MM3 310 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 NECTIN4Q96NY8 510 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 MYADMQ96S97 322 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 PRRX2Q99811 253 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 EIF2AQ9BY44 585 aaKnown RBP6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 GCOM2Q9BZD3 368 aaPredicted RBP6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 NXF3Q9H4D5 531 aaKnown RBP6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 AGPAT5Q9NUQ2 364 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 DZANK1Q9NVP4 752 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 DACT1Q9NYF0 836 aa6.73□□□□□ -1.33
HLA-DPA3-207ENST00000454398 KCNJ14Q9UNX9 436 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms