RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 RNASELQ05823 741 aaKnown RBP13.1□□□□□ -0.31
GARNL3-210ENST00000453030 TCF15Q12870 199 aa13.1□□□□□ -0.31
GARNL3-210ENST00000453030 NONOQ15233 471 aaKnown RBP eCLIP13.1□□□□□ -0.31
GARNL3-210ENST00000453030 LETM2Q2VYF4 491 aa13.1□□□□□ -0.31
GARNL3-210ENST00000453030 GLB1LQ6UWU2 654 aa13.1□□□□□ -0.31
GARNL3-210ENST00000453030 ANO5Q75V66 913 aa13.1□□□□□ -0.31
GARNL3-210ENST00000453030 ZNF410Q86VK4 478 aa13.1□□□□□ -0.31
GARNL3-210ENST00000453030 C12orf76Q8N812 135 aaPredicted RBP13.1□□□□□ -0.31
GARNL3-210ENST00000453030 TMEM87AQ8NBN3 555 aa13.1□□□□□ -0.31
GARNL3-210ENST00000453030 DAGLBQ8NCG7 672 aa13.1□□□□□ -0.31
GARNL3-210ENST00000453030 KREMEN2Q8NCW0 462 aa13.1□□□□□ -0.31
GARNL3-210ENST00000453030 BCL7CQ8WUZ0 217 aaPredicted RBP13.1□□□□□ -0.31
GARNL3-210ENST00000453030 ZBP1Q9H171 429 aa13.1□□□□□ -0.31
GARNL3-210ENST00000453030 CHST12Q9NRB3 414 aa13.1□□□□□ -0.31
GARNL3-210ENST00000453030 FAM105AQ9NUU6 356 aa13.1□□□□□ -0.31
GARNL3-210ENST00000453030 TBC1D13Q9NVG8 400 aa13.1□□□□□ -0.31
GARNL3-210ENST00000453030 FAM86C1Q9NVL1 165 aa13.1□□□□□ -0.31
GARNL3-210ENST00000453030 KCNJ14Q9UNX9 436 aa13.1□□□□□ -0.31
GARNL3-210ENST00000453030 CYP46A1Q9Y6A2 500 aa13.1□□□□□ -0.31
GARNL3-210ENST00000453030 ZFHX2Q9C0A1 2572 aaPredicted RBP13.1□□□□□ -0.31
GARNL3-210ENST00000453030 EML1O00423 815 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 B4GALT3O60512 393 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 DTNBO60941 627 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 MAFO75444 373 aaPredicted RBP13.09□□□□□ -0.31
GARNL3-210ENST00000453030 CXCL14O95715 111 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 EPCAMP16422 314 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 NPEPPSP55786 919 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 PSMC5P62195 406 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 CDC42EP1Q00587 391 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 ITIH3Q06033 890 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 BMS1Q14692 1282 aaKnown RBP13.09□□□□□ -0.31
GARNL3-210ENST00000453030 NOMO2Q5JPE7 1267 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 KANK3Q6NY19 840 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 CPLX2Q6PUV4 134 aaKnown RBP13.09□□□□□ -0.31
GARNL3-210ENST00000453030 MOXD1Q6UVY6 613 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 KRT25Q7Z3Z0 450 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 IGSF21Q96ID5 467 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 MBOAT7Q96N66 472 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 NECTIN4Q96NY8 510 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 PRRX2Q99811 253 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 INO80BQ9C086 356 aaPredicted RBP13.09□□□□□ -0.31
GARNL3-210ENST00000453030 SLKQ9H2G2 1235 aaPredicted RBP13.09□□□□□ -0.31
GARNL3-210ENST00000453030 ADAM7Q9H2U9 754 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 SMOC2Q9H3U7 446 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 NRDE2Q9H7Z3 1164 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 ZSWIM6Q9HCJ5 1215 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 DNAJB4Q9UDY4 337 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 VAV3Q9UKW4 847 aa13.09□□□□□ -0.31
GARNL3-210ENST00000453030 CCDC194A0A1B0GVG4 234 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 BRD1O95696 1058 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 GALTP07902 379 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 CTSAP10619 480 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 SKIP12755 728 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 MTHFRP42898 656 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 SLC11A1P49279 550 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 RAB27AP51159 221 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 POLGP54098 1239 aaPredicted RBP13.08□□□□□ -0.32
GARNL3-210ENST00000453030 MTMR3Q13615 1198 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 KIAA1841Q6NSI8 718 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 TDRD5Q8NAT2 981 aaKnown RBP13.08□□□□□ -0.32
GARNL3-210ENST00000453030 FEZF2Q8TBJ5 459 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 SLC7A3Q8WY07 619 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 ZNF274Q96GC6 653 aaPredicted RBP13.08□□□□□ -0.32
GARNL3-210ENST00000453030 RIPOR3Q96MK2 946 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 JPH2Q9BR39 696 aaPredicted RBP13.08□□□□□ -0.32
GARNL3-210ENST00000453030 TRAIPQ9BWF2 469 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 VN1R3Q9BXE9 311 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 CYP26B1Q9NR63 512 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 AGPAT5Q9NUQ2 364 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 DZANK1Q9NVP4 752 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 WRAP73Q9P2S5 460 aaPredicted RBP13.08□□□□□ -0.32
GARNL3-210ENST00000453030 DBR1Q9UK59 544 aaKnown RBP13.08□□□□□ -0.32
GARNL3-210ENST00000453030 SORCS3Q9UPU3 1222 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 COL4A3BPQ9Y5P4 624 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 DOCK8Q8NF50 2099 aa13.08□□□□□ -0.32
GARNL3-210ENST00000453030 MTCL1Q9Y4B5 1905 aaKnown RBP13.07□□□□□ -0.32
GARNL3-210ENST00000453030 SPDYE4A6NLX3 237 aa13.07□□□□□ -0.32
GARNL3-210ENST00000453030 OFD1O75665 1012 aa13.07□□□□□ -0.32
GARNL3-210ENST00000453030 SSBP05455 408 aaKnown RBP eCLIP13.07□□□□□ -0.32
GARNL3-210ENST00000453030 ASGR2P07307 311 aa13.07□□□□□ -0.32
GARNL3-210ENST00000453030 AVPR2P30518 371 aa13.07□□□□□ -0.32
GARNL3-210ENST00000453030 QARSP47897 775 aaKnown RBP13.07□□□□□ -0.32
GARNL3-210ENST00000453030 PPP2R5CQ13362 524 aa13.07□□□□□ -0.32
GARNL3-210ENST00000453030 PTPN14Q15678 1187 aa13.07□□□□□ -0.32
GARNL3-210ENST00000453030 GALNT17Q6IS24 598 aa13.07□□□□□ -0.32
GARNL3-210ENST00000453030 TMC5Q6UXY8 1006 aa13.07□□□□□ -0.32
GARNL3-210ENST00000453030 NEK8Q86SG6 692 aa13.07□□□□□ -0.32
GARNL3-210ENST00000453030 DDX53Q86TM3 631 aaKnown RBP13.07□□□□□ -0.32
GARNL3-210ENST00000453030 ZNF280BQ86YH2 543 aa13.07□□□□□ -0.32
GARNL3-210ENST00000453030 ZNF579Q8NAF0 562 aaKnown RBP13.07□□□□□ -0.32
GARNL3-210ENST00000453030 URGCPQ8TCY9 931 aa13.07□□□□□ -0.32
GARNL3-210ENST00000453030 PSPC1Q8WXF1 523 aaKnown RBP13.07□□□□□ -0.32
GARNL3-210ENST00000453030 RSPH1Q8WYR4 309 aa13.07□□□□□ -0.32
GARNL3-210ENST00000453030 TMEM143Q96AN5 459 aa13.07□□□□□ -0.32
GARNL3-210ENST00000453030 CEP170P1Q96L14 293 aa13.07□□□□□ -0.32
GARNL3-210ENST00000453030 LXNQ9BS40 222 aa13.07□□□□□ -0.32
GARNL3-210ENST00000453030 IFT122Q9HBG6 1241 aa13.07□□□□□ -0.32
GARNL3-210ENST00000453030 PCDHB2Q9Y5E7 798 aa13.07□□□□□ -0.32
GARNL3-210ENST00000453030 SPTBN4Q9H254 2564 aa13.06□□□□□ -0.32
GARNL3-210ENST00000453030 CCNT1O60563 726 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms