RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 SPON1Q9HCB6 807 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 ADARB2Q9NS39 739 aaKnown RBP12.81□□□□□ -0.36
VTA1-203ENST00000452973 TBX20Q9UMR3 447 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 HYOU1Q9Y4L1 999 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 DOCK5Q9H7D0 1870 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 MAFGO15525 162 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 CNGA1P29973 690 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 SOX5P35711 763 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 PLA2G4AP47712 749 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 JAM2P57087 298 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 MAP2K1Q02750 393 aaPredicted RBP12.81□□□□□ -0.36
VTA1-203ENST00000452973 BRD3Q15059 726 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 PPP2R5AQ15172 486 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 NFIL3Q16649 462 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 INTS8Q75QN2 995 aaKnown RBP12.81□□□□□ -0.36
VTA1-203ENST00000452973 TMEM161BQ8NDZ6 487 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 APEX2Q9UBZ4 518 aa12.81□□□□□ -0.36
VTA1-203ENST00000452973 BZW2Q9Y6E2 419 aaKnown RBP12.81□□□□□ -0.36
VTA1-203ENST00000452973 POTEB2H3BUK9 544 aa12.8□□□□□ -0.36
VTA1-203ENST00000452973 GSPT2Q8IYD1 628 aaKnown RBP12.8□□□□□ -0.36
VTA1-203ENST00000452973 RNF10Q8N5U6 811 aaKnown RBP12.8□□□□□ -0.36
VTA1-203ENST00000452973 PLEKHO2Q8TD55 490 aa12.8□□□□□ -0.36
VTA1-203ENST00000452973 POMGNT1Q8WZA1 660 aa12.8□□□□□ -0.36
VTA1-203ENST00000452973 TMEM143Q96AN5 459 aa12.8□□□□□ -0.36
VTA1-203ENST00000452973 KIAA1217Q5T5P2 1943 aa12.8□□□□□ -0.36
VTA1-203ENST00000452973 FOXN3O00409 490 aaPredicted RBP12.8□□□□□ -0.36
VTA1-203ENST00000452973 DDX3XO00571 662 aaKnown RBP eCLIP12.8□□□□□ -0.365e-15■■■■□ 20.3
VTA1-203ENST00000452973 HNRNPDLO14979 420 aaKnown RBP12.8□□□□□ -0.36
VTA1-203ENST00000452973 ERLIN1O75477 346 aa12.8□□□□□ -0.36
VTA1-203ENST00000452973 ADRB2P07550 413 aa12.8□□□□□ -0.36
VTA1-203ENST00000452973 DLATP10515 647 aaKnown RBP12.8□□□□□ -0.36
VTA1-203ENST00000452973 ADSSP30520 456 aa12.8□□□□□ -0.36
VTA1-203ENST00000452973 NOL9Q5SY16 702 aaKnown RBP12.8□□□□□ -0.36
VTA1-203ENST00000452973 SLC9A9Q8IVB4 645 aa12.8□□□□□ -0.36
VTA1-203ENST00000452973 SMAP1Q8IYB5 467 aaPredicted RBP12.8□□□□□ -0.36
VTA1-203ENST00000452973 UPF1Q92900 1129 aaKnown RBP eCLIP12.8□□□□□ -0.361e-6■□□□□ 9.2
VTA1-203ENST00000452973 FUT8Q9BYC5 575 aa12.8□□□□□ -0.36
VTA1-203ENST00000452973 STK33Q9BYT3 514 aa12.8□□□□□ -0.36
VTA1-203ENST00000452973 SPATA31C2B4DYI2 1134 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 PGK2P07205 417 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 FERP16591 822 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 TCP1P17987 556 aaKnown RBP12.79□□□□□ -0.36
VTA1-203ENST00000452973 PAFAH1B1P43034 410 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 SLC7A5Q01650 507 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 CETN1Q12798 172 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 ALCAMQ13740 583 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 SNRNP35Q16560 246 aaKnown RBP12.79□□□□□ -0.36
VTA1-203ENST00000452973 ARHGEF19Q8IW93 802 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 KAT5Q92993 513 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 CDHR1Q96JP9 859 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 CYP26B1Q9NR63 512 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 RLFQ13129 1914 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 PFASO15067 1338 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 ADGRA3Q8IWK6 1321 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 ATP2A1O14983 1001 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 POLGP54098 1239 aaPredicted RBP12.79□□□□□ -0.36
VTA1-203ENST00000452973 NCKAP1LP55160 1127 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 MIS18BP1Q6P0N0 1132 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 LBX2Q6XYB7 198 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 POLR3FQ9H1D9 316 aaPredicted RBP12.79□□□□□ -0.36
VTA1-203ENST00000452973 ZCCHC17Q9NP64 241 aaKnown RBP12.79□□□□□ -0.36
VTA1-203ENST00000452973 TOPORSQ9NS56 1045 aaPredicted RBP12.79□□□□□ -0.36
VTA1-203ENST00000452973 GRID2IPA4D2P6 1211 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 CLSTN1O94985 981 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 MAPTP10636 758 aaKnown RBP12.79□□□□□ -0.36
VTA1-203ENST00000452973 TNNT3P45378 269 aaPredicted RBP12.79□□□□□ -0.36
VTA1-203ENST00000452973 MXI1P50539 228 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 BEND6Q5SZJ8 279 aaPredicted RBP12.79□□□□□ -0.36
VTA1-203ENST00000452973 C9orf131Q5VYM1 1079 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 ABHD15Q6UXT9 468 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 PPM1KQ8N3J5 372 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 SPATA4Q8NEY3 305 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 HDAC7Q8WUI4 952 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 ACP6Q9NPH0 428 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 XPNPEP1Q9NQW7 623 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 EXOC7Q9UPT5 735 aa12.79□□□□□ -0.36
VTA1-203ENST00000452973 H2AFZP0C0S5 128 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 PRKCIP41743 596 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 IREB2P48200 963 aaKnown RBP12.78□□□□□ -0.36
VTA1-203ENST00000452973 TUBB4BP68371 445 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 KCTD19Q17RG1 926 aaPredicted RBP12.78□□□□□ -0.36
VTA1-203ENST00000452973 EAPPQ56P03 285 aaPredicted RBP12.78□□□□□ -0.36
VTA1-203ENST00000452973 H2AFVQ71UI9 128 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 LNX1Q8TBB1 728 aaPredicted RBP12.78□□□□□ -0.36
VTA1-203ENST00000452973 KIFAP3Q92845 792 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 IWS1Q96ST2 819 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 LRRC1Q9BTT6 524 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 SPATC1LQ9H0A9 340 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 FBXL5Q9UKA1 691 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 RAB21Q9UL25 225 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 PARP14Q460N5 1801 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 EIF3JO75822 258 aaKnown RBP12.78□□□□□ -0.36
VTA1-203ENST00000452973 DGAT1O75907 488 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 ALDH5A1P51649 535 aaPredicted RBP12.78□□□□□ -0.36
VTA1-203ENST00000452973 SH3D19Q5HYK7 790 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 C1orf220Q5T0J3 134 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 PALB2Q86YC2 1186 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 CHST13Q8NET6 341 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 RDM1Q8NG50 284 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 IFT74Q96LB3 600 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms