RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 LRFN2Q9ULH4 789 aa17.89■□□□□ 0.45
SCAMP4-205ENST00000452128 ARHGEF35A5YM69 484 aa17.88■□□□□ 0.45
SCAMP4-205ENST00000452128 VWA3AA6NCI4 1184 aa17.88■□□□□ 0.45
SCAMP4-205ENST00000452128 MEIS3P2A8K0S8 358 aa17.88■□□□□ 0.45
SCAMP4-205ENST00000452128 E9PMD0 336 aa17.88■□□□□ 0.45
SCAMP4-205ENST00000452128 SLC26A4O43511 780 aa17.88■□□□□ 0.45
SCAMP4-205ENST00000452128 STX6O43752 255 aa17.88■□□□□ 0.45
SCAMP4-205ENST00000452128 TSPAN1O60635 241 aa17.88■□□□□ 0.45
SCAMP4-205ENST00000452128 BMP15O95972 392 aa17.88■□□□□ 0.45
SCAMP4-205ENST00000452128 MAPK7Q13164 816 aa17.88■□□□□ 0.45
SCAMP4-205ENST00000452128 GPM6BQ13491 265 aa17.88■□□□□ 0.45
SCAMP4-205ENST00000452128 P2RX5Q93086 422 aa17.88■□□□□ 0.45
SCAMP4-205ENST00000452128 MRPL38Q96DV4 380 aaKnown RBP17.88■□□□□ 0.45
SCAMP4-205ENST00000452128 AK8Q96MA6 479 aa17.88■□□□□ 0.45
SCAMP4-205ENST00000452128 FZD8Q9H461 694 aa17.88■□□□□ 0.45
SCAMP4-205ENST00000452128 FAM105AQ9NUU6 356 aa17.88■□□□□ 0.45
SCAMP4-205ENST00000452128 TYW1Q9NV66 732 aaKnown RBP17.88■□□□□ 0.45
SCAMP4-205ENST00000452128 PLAGL2Q9UPG8 496 aa17.88■□□□□ 0.45
SCAMP4-205ENST00000452128 DNM3Q9UQ16 869 aa17.88■□□□□ 0.45
SCAMP4-205ENST00000452128 RWDD3Q9Y3V2 267 aa17.88■□□□□ 0.45
SCAMP4-205ENST00000452128 BRWD1Q9NSI6 2320 aa17.87■□□□□ 0.45
SCAMP4-205ENST00000452128 TBKBP1A7MCY6 615 aa17.87■□□□□ 0.45
SCAMP4-205ENST00000452128 GRM6O15303 877 aa17.87■□□□□ 0.45
SCAMP4-205ENST00000452128 DNAJB1P25685 340 aa17.87■□□□□ 0.45
SCAMP4-205ENST00000452128 TFDP1Q14186 410 aa17.87■□□□□ 0.45
SCAMP4-205ENST00000452128 COL19A1Q14993 1142 aa17.87■□□□□ 0.45
SCAMP4-205ENST00000452128 CCDC85BQ15834 202 aaPredicted RBP17.87■□□□□ 0.45
SCAMP4-205ENST00000452128 FAM187BQ17R55 369 aa17.87■□□□□ 0.45
SCAMP4-205ENST00000452128 PAN2Q504Q3 1202 aaKnown RBP17.87■□□□□ 0.45
SCAMP4-205ENST00000452128 NAALADL2Q58DX5 795 aa17.87■□□□□ 0.45
SCAMP4-205ENST00000452128 RINT1Q6NUQ1 792 aa17.87■□□□□ 0.45
SCAMP4-205ENST00000452128 PPP4R3CPQ6ZMV5 832 aa17.87■□□□□ 0.45
SCAMP4-205ENST00000452128 MAEAQ7L5Y9 396 aa17.87■□□□□ 0.45
SCAMP4-205ENST00000452128 SLC17A8Q8NDX2 589 aa17.87■□□□□ 0.45
SCAMP4-205ENST00000452128 SPPL3Q8TCT6 385 aa17.87■□□□□ 0.45
SCAMP4-205ENST00000452128 POLD4Q9HCU8 107 aa17.87■□□□□ 0.45
SCAMP4-205ENST00000452128 PIN4Q9Y237 131 aaKnown RBP17.87■□□□□ 0.45
SCAMP4-205ENST00000452128 TTC28Q96AY4 2481 aa17.86■□□□□ 0.45
SCAMP4-205ENST00000452128 TTLL13PA6NNM8 815 aa17.86■□□□□ 0.45
SCAMP4-205ENST00000452128 GTPBP6O43824 516 aaPredicted RBP17.86■□□□□ 0.45
SCAMP4-205ENST00000452128 ITGB1P05556 798 aa17.86■□□□□ 0.45
SCAMP4-205ENST00000452128 AXLP30530 894 aa17.86■□□□□ 0.45
SCAMP4-205ENST00000452128 CTNNB1P35222 781 aa17.86■□□□□ 0.45
SCAMP4-205ENST00000452128 SLC12A3P55017 1021 aa17.86■□□□□ 0.45
SCAMP4-205ENST00000452128 AGMOQ6ZNB7 445 aa17.86■□□□□ 0.45
SCAMP4-205ENST00000452128 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.86■□□□□ 0.45
SCAMP4-205ENST00000452128 SMG8Q8ND04 991 aaKnown RBP17.86■□□□□ 0.45
SCAMP4-205ENST00000452128 RUSC1Q9BVN2 902 aa17.86■□□□□ 0.45
SCAMP4-205ENST00000452128 CCDC113Q9H0I3 377 aa17.86■□□□□ 0.45
SCAMP4-205ENST00000452128 ZSCAN16Q9H4T2 348 aaPredicted RBP17.86■□□□□ 0.45
SCAMP4-205ENST00000452128 FBXO2Q9UK22 296 aaPredicted RBP17.86■□□□□ 0.45
SCAMP4-205ENST00000452128 PCDHB2Q9Y5E7 798 aa17.86■□□□□ 0.45
SCAMP4-205ENST00000452128 A0A1B0GUA9 196 aa17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 INPPL1O15357 1258 aa17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 B4GALT5O43286 388 aa17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 HOXA2O43364 376 aa17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 OFD1O75665 1012 aa17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 SKIP12755 728 aa17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 ARF4P18085 180 aaPredicted RBP17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 LONP1P36776 959 aaKnown RBP17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 FNDC1Q4ZHG4 1894 aaPredicted RBP17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 ARSHQ5FYA8 562 aa17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 TWF2Q6IBS0 349 aaKnown RBP17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 USP49Q70CQ1 688 aa17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 SYT2Q8N9I0 419 aaPredicted RBP17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 KLHL23Q8NBE8 558 aa17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 LPPQ93052 612 aa17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 USP28Q96RU2 1077 aa17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 NTPCRQ9BSD7 190 aaKnown RBP17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 C11orf84Q9BUA3 381 aaPredicted RBP17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 BLOC1S4Q9NUP1 217 aa17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 SRPRBQ9Y5M8 271 aaKnown RBP17.85■□□□□ 0.45
SCAMP4-205ENST00000452128 INO80B-WBP1J3KQ70 363 aa17.84■□□□□ 0.45
SCAMP4-205ENST00000452128 EDN1P05305 212 aa17.84■□□□□ 0.45
SCAMP4-205ENST00000452128 NCLP19338 710 aaKnown RBP17.84■□□□□ 0.45
SCAMP4-205ENST00000452128 GUCY2CP25092 1073 aa17.84■□□□□ 0.45
SCAMP4-205ENST00000452128 NAMPTP43490 491 aa17.84■□□□□ 0.45
SCAMP4-205ENST00000452128 NASPP49321 788 aaPredicted RBP17.84■□□□□ 0.45
SCAMP4-205ENST00000452128 RAB27AP51159 221 aa17.84■□□□□ 0.45
SCAMP4-205ENST00000452128 AFF1P51825 1210 aaKnown RBP17.84■□□□□ 0.45
SCAMP4-205ENST00000452128 SLC39A14Q15043 492 aa17.84■□□□□ 0.45
SCAMP4-205ENST00000452128 HSCBQ8IWL3 235 aa17.84■□□□□ 0.45
SCAMP4-205ENST00000452128 PPM1EQ8WY54 764 aa17.84■□□□□ 0.45
SCAMP4-205ENST00000452128 KIFAP3Q92845 792 aa17.84■□□□□ 0.45
SCAMP4-205ENST00000452128 CCDC51Q96ER9 411 aa17.84■□□□□ 0.45
SCAMP4-205ENST00000452128 CCDC43Q96MW1 224 aaKnown RBP17.84■□□□□ 0.45
SCAMP4-205ENST00000452128 EIF2AQ9BY44 585 aaKnown RBP17.84■□□□□ 0.45
SCAMP4-205ENST00000452128 CCSER1Q9C0I3 900 aa17.84■□□□□ 0.45
SCAMP4-205ENST00000452128 LMAN2LQ9H0V9 348 aa17.84■□□□□ 0.45
SCAMP4-205ENST00000452128 COL4A4P53420 1690 aaPredicted RBP17.83■□□□□ 0.45
SCAMP4-205ENST00000452128 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.83■□□□□ 0.44
SCAMP4-205ENST00000452128 CABP7Q86V35 215 aa17.83■□□□□ 0.44
SCAMP4-205ENST00000452128 COLGALT1Q8NBJ5 622 aa17.83■□□□□ 0.44
SCAMP4-205ENST00000452128 HELQQ8TDG4 1101 aa17.83■□□□□ 0.44
SCAMP4-205ENST00000452128 RSPH1Q8WYR4 309 aa17.83■□□□□ 0.44
SCAMP4-205ENST00000452128 KCNN1Q92952 543 aa17.83■□□□□ 0.44
SCAMP4-205ENST00000452128 CPB2Q96IY4 423 aa17.83■□□□□ 0.44
SCAMP4-205ENST00000452128 NT5C3AQ9H0P0 336 aa17.83■□□□□ 0.44
SCAMP4-205ENST00000452128 CSRNP2Q9H175 543 aa17.83■□□□□ 0.44
SCAMP4-205ENST00000452128 RNF39Q9H2S5 420 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms