RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 PPIGQ13427 754 aaKnown RBP eCLIP26.56■■□□□ 1.842e-6■□□□□ 10.7
CPSF4-207ENST00000451876 USP38Q8NB14 1042 aa26.56■■□□□ 1.84
CPSF4-207ENST00000451876 DBF4BQ8NFT6 615 aa26.56■■□□□ 1.84
CPSF4-207ENST00000451876 DEPTORQ8TB45 409 aa26.56■■□□□ 1.84
CPSF4-207ENST00000451876 KMT5AQ9NQR1 393 aa26.56■■□□□ 1.84
CPSF4-207ENST00000451876 PANK4Q9NVE7 773 aa26.56■■□□□ 1.84
CPSF4-207ENST00000451876 SLC16A4O15374 487 aa26.55■■□□□ 1.84
CPSF4-207ENST00000451876 MCM4P33991 863 aa26.55■■□□□ 1.84
CPSF4-207ENST00000451876 PAK2Q13177 524 aa26.55■■□□□ 1.84
CPSF4-207ENST00000451876 SRGAP1Q7Z6B7 1085 aa26.55■■□□□ 1.84
CPSF4-207ENST00000451876 GPT2Q8TD30 523 aa26.55■■□□□ 1.84
CPSF4-207ENST00000451876 ERVK-5Q9HDB9 667 aa26.55■■□□□ 1.84
CPSF4-207ENST00000451876 ST3GAL5Q9UNP4 418 aa26.55■■□□□ 1.84
CPSF4-207ENST00000451876 INO80B-WBP1J3KQ70 363 aa26.54■■□□□ 1.84
CPSF4-207ENST00000451876 GTPBP6O43824 516 aaPredicted RBP26.54■■□□□ 1.84
CPSF4-207ENST00000451876 TRAK2O60296 914 aa26.54■■□□□ 1.84
CPSF4-207ENST00000451876 NFX1Q12986 1120 aaKnown RBP26.54■■□□□ 1.84
CPSF4-207ENST00000451876 COASYQ13057 564 aa26.54■■□□□ 1.84
CPSF4-207ENST00000451876 POSTNQ15063 836 aa26.54■■□□□ 1.84
CPSF4-207ENST00000451876 SPIRE2Q8WWL2 714 aa26.54■■□□□ 1.84
CPSF4-207ENST00000451876 NTPCRQ9BSD7 190 aaKnown RBP26.54■■□□□ 1.84
CPSF4-207ENST00000451876 INO80BQ9C086 356 aaPredicted RBP26.54■■□□□ 1.84
CPSF4-207ENST00000451876 ARHGAP28Q9P2N2 729 aa26.54■■□□□ 1.84
CPSF4-207ENST00000451876 NCKAP1LP55160 1127 aa26.54■■□□□ 1.84
CPSF4-207ENST00000451876 DPYDQ12882 1025 aa26.54■■□□□ 1.84
CPSF4-207ENST00000451876 PNOCQ13519 176 aa26.54■■□□□ 1.84
CPSF4-207ENST00000451876 ZBTB8OSQ8IWT0 167 aa26.54■■□□□ 1.84
CPSF4-207ENST00000451876 RPUSD2Q8IZ73 545 aaKnown RBP26.54■■□□□ 1.84
CPSF4-207ENST00000451876 TMEM161BQ8NDZ6 487 aa26.54■■□□□ 1.84
CPSF4-207ENST00000451876 ERCC4Q92889 916 aaPredicted RBP26.54■■□□□ 1.84
CPSF4-207ENST00000451876 HPS3Q969F9 1004 aa26.54■■□□□ 1.84
CPSF4-207ENST00000451876 GDF15Q99988 308 aa26.54■■□□□ 1.84
CPSF4-207ENST00000451876 CCDC113Q9H0I3 377 aa26.54■■□□□ 1.84
CPSF4-207ENST00000451876 TBC1D7Q9P0N9 293 aa26.54■■□□□ 1.84
CPSF4-207ENST00000451876 PTPRSQ13332 1948 aa26.53■■□□□ 1.84
CPSF4-207ENST00000451876 KLRC4O43908 158 aa26.53■■□□□ 1.84
CPSF4-207ENST00000451876 EDN1P05305 212 aa26.53■■□□□ 1.84
CPSF4-207ENST00000451876 MYL1P05976 194 aa26.53■■□□□ 1.84
CPSF4-207ENST00000451876 PFKMP08237 780 aa26.53■■□□□ 1.84
CPSF4-207ENST00000451876 SFPQP23246 707 aaKnown RBP eCLIP26.53■■□□□ 1.84
CPSF4-207ENST00000451876 NMT1P30419 496 aaKnown RBP26.53■■□□□ 1.84
CPSF4-207ENST00000451876 HERC4Q5GLZ8 1057 aaPredicted RBP26.53■■□□□ 1.84
CPSF4-207ENST00000451876 KANK3Q6NY19 840 aa26.53■■□□□ 1.84
CPSF4-207ENST00000451876 UNC13DQ70J99 1090 aa26.53■■□□□ 1.84
CPSF4-207ENST00000451876 TAS1R3Q7RTX0 852 aa26.53■■□□□ 1.84
CPSF4-207ENST00000451876 FAM178BQ8IXR5 827 aa26.53■■□□□ 1.84
CPSF4-207ENST00000451876 CCDC65Q8IXS2 484 aa26.53■■□□□ 1.84
CPSF4-207ENST00000451876 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.53■■□□□ 1.841e-6■■■□□ 19
CPSF4-207ENST00000451876 FGFBP2Q9BYJ0 223 aa26.53■■□□□ 1.84
CPSF4-207ENST00000451876 C2orf40Q9H1Z8 148 aa26.53■■□□□ 1.84
CPSF4-207ENST00000451876 TMX1Q9H3N1 280 aa26.53■■□□□ 1.84
CPSF4-207ENST00000451876 GPR182O15218 404 aa26.52■■□□□ 1.84
CPSF4-207ENST00000451876 GAP43P17677 238 aa26.52■■□□□ 1.84
CPSF4-207ENST00000451876 EHHADHQ08426 723 aa26.52■■□□□ 1.84
CPSF4-207ENST00000451876 AMHR2Q16671 573 aa26.52■■□□□ 1.84
CPSF4-207ENST00000451876 CNKSR3Q6P9H4 555 aa26.52■■□□□ 1.84
CPSF4-207ENST00000451876 SEPT8Q92599 483 aa26.52■■□□□ 1.84
CPSF4-207ENST00000451876 K7ENM7 598 aa26.51■■□□□ 1.83
CPSF4-207ENST00000451876 B4GALT5O43286 388 aa26.51■■□□□ 1.83
CPSF4-207ENST00000451876 SMTNP53814 917 aa26.51■■□□□ 1.83
CPSF4-207ENST00000451876 TMEM240Q5SV17 173 aa26.51■■□□□ 1.83
CPSF4-207ENST00000451876 ZNF365Q70YC5 407 aa26.51■■□□□ 1.83
CPSF4-207ENST00000451876 CATSPER4Q7RTX7 472 aa26.51■■□□□ 1.83
CPSF4-207ENST00000451876 OLFML3Q9NRN5 406 aa26.51■■□□□ 1.83
CPSF4-207ENST00000451876 SEL1LQ9UBV2 794 aa26.51■■□□□ 1.83
CPSF4-207ENST00000451876 USP20Q9Y2K6 914 aa26.51■■□□□ 1.83
CPSF4-207ENST00000451876 PHLPP2Q6ZVD8 1323 aa26.51■■□□□ 1.83
CPSF4-207ENST00000451876 PVALEFA0A1B0GWK0 134 aa26.5■■□□□ 1.83
CPSF4-207ENST00000451876 DENND3A2RUS2 1198 aa26.5■■□□□ 1.83
CPSF4-207ENST00000451876 TTLL13PA6NNM8 815 aa26.5■■□□□ 1.83
CPSF4-207ENST00000451876 MAPTP10636 758 aaKnown RBP26.5■■□□□ 1.83
CPSF4-207ENST00000451876 OTOP2Q7RTS6 562 aa26.5■■□□□ 1.83
CPSF4-207ENST00000451876 HAUS6Q7Z4H7 955 aa26.5■■□□□ 1.83
CPSF4-207ENST00000451876 GLIS3Q8NEA6 775 aa26.5■■□□□ 1.83
CPSF4-207ENST00000451876 CCDC34Q96HJ3 373 aa26.5■■□□□ 1.83
CPSF4-207ENST00000451876 FZD8Q9H461 694 aa26.5■■□□□ 1.83
CPSF4-207ENST00000451876 MRPL44Q9H9J2 332 aaKnown RBP26.5■■□□□ 1.83
CPSF4-207ENST00000451876 LAMA3Q16787 3333 aa26.5■■□□□ 1.83
CPSF4-207ENST00000451876 MGEA5O60502 916 aa26.5■■□□□ 1.83
CPSF4-207ENST00000451876 TSPAN1O60635 241 aa26.5■■□□□ 1.83
CPSF4-207ENST00000451876 CASP5P51878 434 aa26.5■■□□□ 1.83
CPSF4-207ENST00000451876 EFNA5P52803 228 aa26.5■■□□□ 1.83
CPSF4-207ENST00000451876 LINC01599Q8WXQ3 324 aa26.5■■□□□ 1.83
CPSF4-207ENST00000451876 APBB2Q92870 758 aa26.5■■□□□ 1.83
CPSF4-207ENST00000451876 AGPAT5Q9NUQ2 364 aa26.5■■□□□ 1.83
CPSF4-207ENST00000451876 K7ERI5 159 aa26.49■■□□□ 1.83
CPSF4-207ENST00000451876 ERLIN2O94905 339 aa26.49■■□□□ 1.83
CPSF4-207ENST00000451876 RPN1P04843 607 aaKnown RBP26.49■■□□□ 1.83
CPSF4-207ENST00000451876 PRKCBP05771 671 aa26.49■■□□□ 1.83
CPSF4-207ENST00000451876 CAMK4Q16566 473 aa26.49■■□□□ 1.83
CPSF4-207ENST00000451876 MAPK6Q16659 721 aa26.49■■□□□ 1.83
CPSF4-207ENST00000451876 KMT5BQ4FZB7 885 aa26.49■■□□□ 1.83
CPSF4-207ENST00000451876 ZC2HC1CQ53FD0 456 aaPredicted RBP26.49■■□□□ 1.83
CPSF4-207ENST00000451876 PSRC1Q6PGN9 363 aaPredicted RBP26.49■■□□□ 1.83
CPSF4-207ENST00000451876 PRMT7Q9NVM4 692 aaPredicted RBP26.49■■□□□ 1.83
CPSF4-207ENST00000451876 KCNG1Q9UIX4 513 aa26.49■■□□□ 1.83
CPSF4-207ENST00000451876 C9orf50Q5SZB4 431 aa26.48■■□□□ 1.83
CPSF4-207ENST00000451876 PPP4R3CPQ6ZMV5 832 aa26.48■■□□□ 1.83
CPSF4-207ENST00000451876 ZNF720Q7Z2F6 126 aa26.48■■□□□ 1.83
CPSF4-207ENST00000451876 ELOA2Q8IYF1 753 aaPredicted RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms