RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 PTCRAQ6ISU1 281 aaPredicted RBP9.71□□□□□ -0.86
RFX3-209ENST00000451859 ADGRD2Q7Z7M1 963 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 TPH2Q8IWU9 490 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 ABI1Q8IZP0 508 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 TNFRSF25Q93038 417 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 TMEM143Q96AN5 459 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 ZNF775Q96BV0 537 aaPredicted RBP9.71□□□□□ -0.86
RFX3-209ENST00000451859 CEP170P1Q96L14 293 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 CEP89Q96ST8 783 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 FDXACB1Q9BRP7 624 aaPredicted RBP9.71□□□□□ -0.86
RFX3-209ENST00000451859 PLVAPQ9BX97 442 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 GCOM2Q9BZD3 368 aaPredicted RBP9.71□□□□□ -0.86
RFX3-209ENST00000451859 IL21Q9HBE4 155 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 CYP26B1Q9NR63 512 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 TMEM161AQ9NX61 479 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 SUCLA2Q9P2R7 463 aaPredicted RBP9.71□□□□□ -0.86
RFX3-209ENST00000451859 PLAGL2Q9UPG8 496 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 LIMCH1Q9UPQ0 1083 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 PCDHGC5Q9Y5F6 944 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.7□□□□□ -0.86
RFX3-209ENST00000451859 ZBTB39O15060 712 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 TBX3O15119 743 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 LINC01565O15544 149 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 DKC1O60832 514 aaKnown RBP eCLIP9.7□□□□□ -0.86
RFX3-209ENST00000451859 P4HBP07237 508 aaKnown RBP9.7□□□□□ -0.86
RFX3-209ENST00000451859 IRS1P35568 1242 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 PBX3P40426 434 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 TXKP42681 527 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 HYAL1Q12794 435 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 EPHA7Q15375 998 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 SAFBQ15424 915 aaKnown RBP eCLIP9.7□□□□□ -0.86
RFX3-209ENST00000451859 TSR1Q2NL82 804 aaKnown RBP9.7□□□□□ -0.86
RFX3-209ENST00000451859 C8orf34Q49A92 452 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 XKR9Q5GH70 373 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 TWF2Q6IBS0 349 aaKnown RBP9.7□□□□□ -0.86
RFX3-209ENST00000451859 RBM23Q86U06 439 aaKnown RBP9.7□□□□□ -0.86
RFX3-209ENST00000451859 PACS2Q86VP3 889 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 SLFN12Q8IYM2 578 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 THNSL1Q8IYQ7 743 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 HELQQ8TDG4 1101 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 MICAL1Q8TDZ2 1067 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 POF1BQ8WVV4 589 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 SLC7A3Q8WY07 619 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 ZNF516Q92618 1163 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 C8orf76Q96K31 380 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 CCDC43Q96MW1 224 aaKnown RBP9.7□□□□□ -0.86
RFX3-209ENST00000451859 LMAN2LQ9H0V9 348 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 TYW1Q9NV66 732 aaKnown RBP9.7□□□□□ -0.86
RFX3-209ENST00000451859 PIN4Q9Y237 131 aaKnown RBP9.7□□□□□ -0.86
RFX3-209ENST00000451859 PCDHB12Q9Y5F1 795 aa9.7□□□□□ -0.86
RFX3-209ENST00000451859 A0A087WWV3 80 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 IGKV6-21A0A0C4DH24 114 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 C3orf80F5H4A9 247 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 FGF18O76093 207 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 SRGAP2CP0DJJ0 459 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 SFPQP23246 707 aaKnown RBP eCLIP9.69□□□□□ -0.862e-6■■■□□ 15.1
RFX3-209ENST00000451859 YWHABP31946 246 aaKnown RBP9.69□□□□□ -0.86
RFX3-209ENST00000451859 MCM7P33993 719 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 DLX2Q07687 328 aaPredicted RBP9.69□□□□□ -0.86
RFX3-209ENST00000451859 SPIRE1Q08AE8 756 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 GNL2Q13823 731 aaKnown RBP9.69□□□□□ -0.86
RFX3-209ENST00000451859 CAMK1Q14012 370 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 EMC2Q15006 297 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 LEXMQ3ZCV2 418 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 CLLU1OSQ5K130 101 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 CATSPER4Q7RTX7 472 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 ECHDC2Q86YB7 292 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 FAM184AQ8NB25 1140 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 COLGALT1Q8NBJ5 622 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.69□□□□□ -0.86
RFX3-209ENST00000451859 SPPL3Q8TCT6 385 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 DDX12PQ92771 950 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 LPPQ93052 612 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 P2RX5Q93086 422 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 PABPC5Q96DU9 382 aaKnown RBP9.69□□□□□ -0.86
RFX3-209ENST00000451859 KIF2CQ99661 725 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 EIF2AK1Q9BQI3 630 aaKnown RBP9.69□□□□□ -0.86
RFX3-209ENST00000451859 JPH2Q9BR39 696 aaPredicted RBP9.69□□□□□ -0.86
RFX3-209ENST00000451859 TMEM117Q9H0C3 514 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 ELAC1Q9H777 363 aaKnown RBP9.69□□□□□ -0.86
RFX3-209ENST00000451859 TTC12Q9H892 705 aaPredicted RBP9.69□□□□□ -0.86
RFX3-209ENST00000451859 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.69□□□□□ -0.86
RFX3-209ENST00000451859 AAASQ9NRG9 546 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 RNF19AQ9NV58 838 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 PCDHA12Q9UN75 941 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 COL4A3BPQ9Y5P4 624 aa9.69□□□□□ -0.86
RFX3-209ENST00000451859 HOXA2O43364 376 aa9.68□□□□□ -0.86
RFX3-209ENST00000451859 TBX10O75333 385 aa9.68□□□□□ -0.86
RFX3-209ENST00000451859 ATF7P17544 494 aaPredicted RBP9.68□□□□□ -0.86
RFX3-209ENST00000451859 LAG3P18627 525 aa9.68□□□□□ -0.86
RFX3-209ENST00000451859 SSTR3P32745 418 aaPredicted RBP9.68□□□□□ -0.86
RFX3-209ENST00000451859 CA8P35219 290 aa9.68□□□□□ -0.86
RFX3-209ENST00000451859 NRIP1P48552 1158 aa9.68□□□□□ -0.86
RFX3-209ENST00000451859 NDUFV1P49821 464 aa9.68□□□□□ -0.86
RFX3-209ENST00000451859 FAM189BP81408 668 aa9.68□□□□□ -0.86
RFX3-209ENST00000451859 LRRC55Q6ZSA7 311 aa9.68□□□□□ -0.86
RFX3-209ENST00000451859 OTUD6AQ7L8S5 288 aa9.68□□□□□ -0.86
RFX3-209ENST00000451859 ZNF410Q86VK4 478 aa9.68□□□□□ -0.86
RFX3-209ENST00000451859 C4orf19Q8IY42 314 aa9.68□□□□□ -0.86
RFX3-209ENST00000451859 LRRC43Q8N309 656 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms