RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 LAG3P18627 525 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 CCT6AP40227 531 aaKnown RBP10.77□□□□□ -0.69
USP54-207ENST00000451492 NRIP1P48552 1158 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 FAM189BP81408 668 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 CAPSQ13938 189 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 CAMK1Q14012 370 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 PTCRAQ6ISU1 281 aaPredicted RBP10.77□□□□□ -0.69
USP54-207ENST00000451492 CATSPER3Q86XQ3 398 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 EXOC8Q8IYI6 725 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.77□□□□□ -0.69
USP54-207ENST00000451492 HSD17B14Q9BPX1 270 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 APOL6Q9BWW8 343 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 ENTPD7Q9NQZ7 604 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 TLR9Q9NR96 1032 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 ANKEF1Q9NU02 776 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 AGPAT5Q9NUQ2 364 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 FAM105AQ9NUU6 356 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 SMC3Q9UQE7 1217 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 KIF3AQ9Y496 699 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 PPME1Q9Y570 386 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.76□□□□□ -0.69
USP54-207ENST00000451492 ARHGEF35A5YM69 484 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 LRRIQ4A6NIV6 560 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 PP2D1A8MPX8 630 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 PER2O15055 1255 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 TBX10O75333 385 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 LYPLA2O95372 231 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 SPATA31C1P0DKV0 1188 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 LIG1P18858 919 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 NDUFV1P49821 464 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 RNASELQ05823 741 aaKnown RBP10.76□□□□□ -0.69
USP54-207ENST00000451492 DLX2Q07687 328 aaPredicted RBP10.76□□□□□ -0.69
USP54-207ENST00000451492 PTGDRQ13258 359 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 TFDP1Q14186 410 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 ZRSR1Q15695 479 aaKnown RBP10.76□□□□□ -0.69
USP54-207ENST00000451492 NAALADL2Q58DX5 795 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 HAUS3Q68CZ6 603 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 KCNT2Q6UVM3 1135 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 SRGAP1Q7Z6B7 1085 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 ZNF598Q86UK7 904 aaKnown RBP10.76□□□□□ -0.69
USP54-207ENST00000451492 CDR2LQ86X02 465 aaPredicted RBP10.76□□□□□ -0.69
USP54-207ENST00000451492 SNX29Q8TEQ0 813 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 PABPC5Q96DU9 382 aaKnown RBP10.76□□□□□ -0.69
USP54-207ENST00000451492 ZNF558Q96NG5 402 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 POLD4Q9HCU8 107 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 TUFT1Q9NNX1 390 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 CHST12Q9NRB3 414 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 LRWD1Q9UFC0 647 aa10.76□□□□□ -0.69
USP54-207ENST00000451492 TSPAN1O60635 241 aa10.75□□□□□ -0.69
USP54-207ENST00000451492 EOMESO95936 686 aa10.75□□□□□ -0.69
USP54-207ENST00000451492 GLRA2P23416 452 aa10.75□□□□□ -0.69
USP54-207ENST00000451492 U2AF2P26368 475 aaKnown RBP eCLIP10.75□□□□□ -0.69
USP54-207ENST00000451492 SSTR3P32745 418 aaPredicted RBP10.75□□□□□ -0.69
USP54-207ENST00000451492 TRAPPC10P48553 1259 aa10.75□□□□□ -0.69
USP54-207ENST00000451492 TOB1P50616 345 aaPredicted RBP10.75□□□□□ -0.69
USP54-207ENST00000451492 RAB27AP51159 221 aa10.75□□□□□ -0.69
USP54-207ENST00000451492 BCAR1P56945 870 aa10.75□□□□□ -0.69
USP54-207ENST00000451492 ERVFC1P60507 584 aa10.75□□□□□ -0.69
USP54-207ENST00000451492 RBM10P98175 930 aaKnown RBP10.75□□□□□ -0.69
USP54-207ENST00000451492 ORC2Q13416 577 aaPredicted RBP10.75□□□□□ -0.69
USP54-207ENST00000451492 MXD4Q14582 209 aaPredicted RBP10.75□□□□□ -0.69
USP54-207ENST00000451492 ECM1Q16610 540 aa10.75□□□□□ -0.69
USP54-207ENST00000451492 TMEM132AQ24JP5 1023 aa10.75□□□□□ -0.69
USP54-207ENST00000451492 LEXMQ3ZCV2 418 aa10.75□□□□□ -0.69
USP54-207ENST00000451492 LLGL2Q6P1M3 1020 aa10.75□□□□□ -0.69
USP54-207ENST00000451492 PPP2R3CQ969Q6 453 aa10.75□□□□□ -0.69
USP54-207ENST00000451492 TCF25Q9BQ70 676 aa10.75□□□□□ -0.69
USP54-207ENST00000451492 POLR3CQ9BUI4 534 aaPredicted RBP10.75□□□□□ -0.69
USP54-207ENST00000451492 EIF2AQ9BY44 585 aaKnown RBP10.75□□□□□ -0.69
USP54-207ENST00000451492 MRPL9Q9BYD2 267 aaKnown RBP10.75□□□□□ -0.69
USP54-207ENST00000451492 FOXD4L1Q9NU39 408 aa10.75□□□□□ -0.69
USP54-207ENST00000451492 DDX19AQ9NUU7 478 aaKnown RBP10.75□□□□□ -0.69
USP54-207ENST00000451492 BARX2Q9UMQ3 279 aaPredicted RBP10.75□□□□□ -0.69
USP54-207ENST00000451492 HES2Q9Y543 173 aa10.75□□□□□ -0.69
USP54-207ENST00000451492 PCDHB2Q9Y5E7 798 aa10.75□□□□□ -0.69
USP54-207ENST00000451492 TRIP11Q15643 1979 aa10.75□□□□□ -0.69
USP54-207ENST00000451492 PLXNA3P51805 1871 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 VPS37CA5D8V6 355 aaPredicted RBP10.74□□□□□ -0.69
USP54-207ENST00000451492 ASAP2O43150 1006 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 B4GALT5O43286 388 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 NPTXRO95502 500 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 POMCP01189 267 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 SKIP12755 728 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 RPA1P27694 616 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 CDC25AP30304 524 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 ARL2P36404 184 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 FXR2P51116 673 aaKnown RBP eCLIP10.74□□□□□ -0.69
USP54-207ENST00000451492 PTENP60484 403 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 MBTD1Q05BQ5 628 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 CSPP1Q1MSJ5 1256 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 NOMO2Q5JPE7 1267 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 UBXN11Q5T124 520 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 NOTUMQ6P988 496 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 PADI6Q6TGC4 694 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 GLB1LQ6UWU2 654 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 TMC7Q7Z402 723 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 C4orf32Q8N8J7 132 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 URGCPQ8TCY9 931 aa10.74□□□□□ -0.69
USP54-207ENST00000451492 MRPS27Q92552 414 aaKnown RBP10.74□□□□□ -0.69
USP54-207ENST00000451492 PGBD4Q96DM1 585 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms