RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 MXD4Q14582 209 aaPredicted RBP17.01■□□□□ 0.31
CHD3-205ENST00000449744 TTC38Q5R3I4 469 aa17.01■□□□□ 0.31
CHD3-205ENST00000449744 PDE12Q6L8Q7 609 aaKnown RBP17.01■□□□□ 0.31
CHD3-205ENST00000449744 ADGRD2Q7Z7M1 963 aa17.01■□□□□ 0.31
CHD3-205ENST00000449744 RBM23Q86U06 439 aaKnown RBP17.01■□□□□ 0.31
CHD3-205ENST00000449744 NOSTRINQ8IVI9 506 aa17.01■□□□□ 0.31
CHD3-205ENST00000449744 ERMNQ8TAM6 284 aa17.01■□□□□ 0.31
CHD3-205ENST00000449744 MRPS27Q92552 414 aaKnown RBP17.01■□□□□ 0.31
CHD3-205ENST00000449744 PGBD4Q96DM1 585 aa17.01■□□□□ 0.31
CHD3-205ENST00000449744 XPNPEP1Q9NQW7 623 aa17.01■□□□□ 0.31
CHD3-205ENST00000449744 AGPAT5Q9NUQ2 364 aa17.01■□□□□ 0.31
CHD3-205ENST00000449744 LZTS1Q9Y250 596 aa17.01■□□□□ 0.31
CHD3-205ENST00000449744 KIF3AQ9Y496 699 aa17.01■□□□□ 0.31
CHD3-205ENST00000449744 PLXNA4Q9HCM2 1894 aa17.01■□□□□ 0.31
CHD3-205ENST00000449744 LINC01565O15544 149 aa17■□□□□ 0.31
CHD3-205ENST00000449744 ERLIN2O94905 339 aa17■□□□□ 0.31
CHD3-205ENST00000449744 XRCC6P12956 609 aaKnown RBP eCLIP17■□□□□ 0.31
CHD3-205ENST00000449744 SSTR3P32745 418 aaPredicted RBP17■□□□□ 0.31
CHD3-205ENST00000449744 LTBRP36941 435 aa17■□□□□ 0.31
CHD3-205ENST00000449744 TRAPPC10P48553 1259 aa17■□□□□ 0.31
CHD3-205ENST00000449744 RARRES1P49788 294 aa17■□□□□ 0.31
CHD3-205ENST00000449744 PLCB3Q01970 1234 aa17■□□□□ 0.31
CHD3-205ENST00000449744 NCBP1Q09161 790 aaKnown RBP17■□□□□ 0.31
CHD3-205ENST00000449744 ADAM15Q13444 863 aa17■□□□□ 0.31
CHD3-205ENST00000449744 CLUL1Q15846 466 aa17■□□□□ 0.31
CHD3-205ENST00000449744 LONRF3Q496Y0 759 aa17■□□□□ 0.31
CHD3-205ENST00000449744 GLB1LQ6UWU2 654 aa17■□□□□ 0.31
CHD3-205ENST00000449744 FAM178BQ8IXR5 827 aa17■□□□□ 0.31
CHD3-205ENST00000449744 PIGOQ8TEQ8 1089 aa17■□□□□ 0.31
CHD3-205ENST00000449744 LPPQ93052 612 aa17■□□□□ 0.31
CHD3-205ENST00000449744 C1QTNF1Q9BXJ1 281 aa17■□□□□ 0.31
CHD3-205ENST00000449744 TLE6Q9H808 572 aa17■□□□□ 0.31
CHD3-205ENST00000449744 TUFT1Q9NNX1 390 aa17■□□□□ 0.31
CHD3-205ENST00000449744 SPG21Q9NZD8 308 aa17■□□□□ 0.31
CHD3-205ENST00000449744 PCDHGC5Q9Y5F6 944 aa17■□□□□ 0.31
CHD3-205ENST00000449744 ARID2Q68CP9 1835 aa17■□□□□ 0.31
CHD3-205ENST00000449744 ZNF623O75123 536 aa16.99■□□□□ 0.31
CHD3-205ENST00000449744 PBX3P40426 434 aa16.99■□□□□ 0.31
CHD3-205ENST00000449744 ALDH7A1P49419 539 aaKnown RBP16.99■□□□□ 0.31
CHD3-205ENST00000449744 ERVFC1P60507 584 aa16.99■□□□□ 0.31
CHD3-205ENST00000449744 DLX2Q07687 328 aaPredicted RBP16.99■□□□□ 0.31
CHD3-205ENST00000449744 CATSPER3Q86XQ3 398 aa16.99■□□□□ 0.31
CHD3-205ENST00000449744 GJD3Q8N144 294 aa16.99■□□□□ 0.31
CHD3-205ENST00000449744 EFHBQ8N7U6 833 aa16.99■□□□□ 0.31
CHD3-205ENST00000449744 TCF25Q9BQ70 676 aa16.99■□□□□ 0.31
CHD3-205ENST00000449744 MINDY3Q9H8M7 445 aa16.99■□□□□ 0.31
CHD3-205ENST00000449744 ENTPD7Q9NQZ7 604 aa16.99■□□□□ 0.31
CHD3-205ENST00000449744 INPP5FQ9Y2H2 1132 aa16.99■□□□□ 0.31
CHD3-205ENST00000449744 PCDHB2Q9Y5E7 798 aa16.99■□□□□ 0.31
CHD3-205ENST00000449744 MUC3AQ02505 3323 aa16.99■□□□□ 0.31
CHD3-205ENST00000449744 A0A087WWV3 80 aa16.98■□□□□ 0.31
CHD3-205ENST00000449744 FSD2A1L4K1 749 aa16.98■□□□□ 0.31
CHD3-205ENST00000449744 CARNS1A5YM72 827 aa16.98■□□□□ 0.31
CHD3-205ENST00000449744 INO80B-WBP1J3KQ70 363 aa16.98■□□□□ 0.31
CHD3-205ENST00000449744 USO1O60763 962 aaKnown RBP16.98■□□□□ 0.31
CHD3-205ENST00000449744 TBX10O75333 385 aa16.98■□□□□ 0.31
CHD3-205ENST00000449744 PTENP60484 403 aa16.98■□□□□ 0.31
CHD3-205ENST00000449744 RNASELQ05823 741 aaKnown RBP16.98■□□□□ 0.31
CHD3-205ENST00000449744 PCBP1Q15365 356 aaKnown RBP eCLIP16.98■□□□□ 0.31
CHD3-205ENST00000449744 NOMO2Q5JPE7 1267 aa16.98■□□□□ 0.31
CHD3-205ENST00000449744 PLPP4Q5VZY2 271 aa16.98■□□□□ 0.31
CHD3-205ENST00000449744 TMC7Q7Z402 723 aa16.98■□□□□ 0.31
CHD3-205ENST00000449744 NACC1Q96RE7 527 aa16.98■□□□□ 0.31
CHD3-205ENST00000449744 CDCA3Q99618 268 aaPredicted RBP16.98■□□□□ 0.31
CHD3-205ENST00000449744 POLR3CQ9BUI4 534 aaPredicted RBP16.98■□□□□ 0.31
CHD3-205ENST00000449744 NGRNQ9NPE2 291 aaKnown RBP16.98■□□□□ 0.31
CHD3-205ENST00000449744 CD207Q9UJ71 328 aa16.98■□□□□ 0.31
CHD3-205ENST00000449744 FSCN2O14926 492 aa16.97■□□□□ 0.31
CHD3-205ENST00000449744 PER2O15055 1255 aa16.97■□□□□ 0.31
CHD3-205ENST00000449744 MBTPS2O43462 519 aa16.97■□□□□ 0.31
CHD3-205ENST00000449744 ZC3H11AO75152 810 aaKnown RBP eCLIP16.97■□□□□ 0.31
CHD3-205ENST00000449744 MED24O75448 989 aa16.97■□□□□ 0.31
CHD3-205ENST00000449744 SPATA31C1P0DKV0 1188 aa16.97■□□□□ 0.31
CHD3-205ENST00000449744 AXLP30530 894 aa16.97■□□□□ 0.31
CHD3-205ENST00000449744 ARL2P36404 184 aa16.97■□□□□ 0.31
CHD3-205ENST00000449744 BCAR1P56945 870 aa16.97■□□□□ 0.31
CHD3-205ENST00000449744 POU5F1BQ06416 359 aa16.97■□□□□ 0.31
CHD3-205ENST00000449744 SMAD4Q13485 552 aaKnown RBP16.97■□□□□ 0.31
CHD3-205ENST00000449744 BMS1Q14692 1282 aaKnown RBP16.97■□□□□ 0.31
CHD3-205ENST00000449744 HAUS3Q68CZ6 603 aa16.97■□□□□ 0.31
CHD3-205ENST00000449744 MAEAQ7L5Y9 396 aa16.97■□□□□ 0.31
CHD3-205ENST00000449744 SLC39A11Q8N1S5 342 aa16.97■□□□□ 0.31
CHD3-205ENST00000449744 CNNM3Q8NE01 707 aa16.97■□□□□ 0.31
CHD3-205ENST00000449744 URGCPQ8TCY9 931 aa16.97■□□□□ 0.31
CHD3-205ENST00000449744 ASAP3Q8TDY4 903 aa16.97■□□□□ 0.31
CHD3-205ENST00000449744 TMEM169Q96HH4 297 aa16.97■□□□□ 0.31
CHD3-205ENST00000449744 POLR3FQ9H1D9 316 aaPredicted RBP16.97■□□□□ 0.31
CHD3-205ENST00000449744 PRKAG3Q9UGI9 489 aa16.97■□□□□ 0.31
CHD3-205ENST00000449744 MEIS3P2A8K0S8 358 aa16.96■□□□□ 0.31
CHD3-205ENST00000449744 NT5C1B-RDH14C9J2C7 533 aa16.96■□□□□ 0.31
CHD3-205ENST00000449744 OFD1O75665 1012 aa16.96■□□□□ 0.31
CHD3-205ENST00000449744 SRGAP2BP0DMP2 458 aa16.96■□□□□ 0.31
CHD3-205ENST00000449744 GLRA2P23416 452 aa16.96■□□□□ 0.31
CHD3-205ENST00000449744 U2AF2P26368 475 aaKnown RBP eCLIP16.96■□□□□ 0.31
CHD3-205ENST00000449744 RPA1P27694 616 aa16.96■□□□□ 0.31
CHD3-205ENST00000449744 HOXA11P31270 313 aaPredicted RBP16.96■□□□□ 0.31
CHD3-205ENST00000449744 CA8P35219 290 aa16.96■□□□□ 0.31
CHD3-205ENST00000449744 MCM2P49736 904 aa16.96■□□□□ 0.31
CHD3-205ENST00000449744 CAPSQ13938 189 aa16.96■□□□□ 0.31
CHD3-205ENST00000449744 NBR1Q14596 966 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms