RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.19□□□□□ -0.94
HCG18-238ENST00000449544 NCAM2O15394 837 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 MSNP26038 577 aaKnown RBP9.19□□□□□ -0.94
HCG18-238ENST00000449544 ACTN2P35609 894 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 GRIK1P39086 918 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 EPHB3P54753 998 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 EVX2Q03828 476 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 ZNF280DQ6N043 979 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 LRRC43Q8N309 656 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 USP25Q9UHP3 1055 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 Q9Y3F1 56 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 CLIC2O15247 247 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 MSH4O15457 936 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 PTPN11Q06124 597 aaPredicted RBP9.19□□□□□ -0.94
HCG18-238ENST00000449544 PTPAQ15257 358 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 SPA17Q15506 151 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 RAD9AQ99638 391 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 CCDC113Q9H0I3 377 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 NRAPQ86VF7 1730 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 MYOM1P52179 1685 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 CASTOR2A6NHX0 329 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 CYBBP04839 570 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 CD58P19256 250 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 DCAF4L1Q3SXM0 396 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 CCDC70Q6NSX1 233 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 SLC24A5Q71RS6 500 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 CEP68Q76N32 757 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 TEX2Q8IWB9 1127 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 OXER1Q8TDS5 423 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 CTNNBL1Q8WYA6 563 aaPredicted RBP9.19□□□□□ -0.94
HCG18-238ENST00000449544 KIAA1586Q9HCI6 787 aa9.19□□□□□ -0.94
HCG18-238ENST00000449544 THG1LQ9NWX6 298 aaKnown RBP9.19□□□□□ -0.94
HCG18-238ENST00000449544 ANKRD26Q9UPS8 1709 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 HIP1RO75146 1068 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 GJA9P57773 515 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 RRP1BQ14684 758 aaKnown RBP9.18□□□□□ -0.94
HCG18-238ENST00000449544 NOMO2Q5JPE7 1267 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 MFSD5Q6N075 450 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 DCUN1D2Q6PH85 259 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 CCDC149Q6ZUS6 474 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 FLCNQ8NFG4 579 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 HELQQ8TDG4 1101 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 ARID3AQ99856 593 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 AGO2Q9UKV8 859 aaKnown RBP9.18□□□□□ -0.94
HCG18-238ENST00000449544 PADI3Q9ULW8 664 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 C5P01031 1676 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 A8MXQ7 604 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 NT5C1B-RDH14C9J2C7 533 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 PLCG1P19174 1290 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 PCSK1P29120 753 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 CDR1P51861 262 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 RNASE9P60153 205 aaKnown RBP9.18□□□□□ -0.94
HCG18-238ENST00000449544 ABI2Q9NYB9 513 aaPredicted RBP9.18□□□□□ -0.94
HCG18-238ENST00000449544 SH3BP1Q9Y3L3 701 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 SNX9Q9Y5X1 595 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 YEATS4O95619 227 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 ORC2Q13416 577 aaPredicted RBP9.18□□□□□ -0.94
HCG18-238ENST00000449544 ADAM9Q13443 819 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 ARHGAP44Q17R89 818 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 NEK11Q8NG66 645 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.18□□□□□ -0.94
HCG18-238ENST00000449544 DDX27Q96GQ7 796 aaKnown RBP9.18□□□□□ -0.94
HCG18-238ENST00000449544 HEXIM2Q96MH2 286 aaKnown RBP9.18□□□□□ -0.94
HCG18-238ENST00000449544 SLITRK1Q96PX8 696 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 ALS2CR12Q96Q35 445 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 GAD1Q99259 594 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 UNC45AQ9H3U1 944 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 FAM217BQ9NTX9 383 aaPredicted RBP9.18□□□□□ -0.94
HCG18-238ENST00000449544 HAUS2Q9NVX0 235 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 CPSF3Q9UKF6 684 aaKnown RBP9.18□□□□□ -0.94
HCG18-238ENST00000449544 PCDHB6Q9Y5E3 794 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 CNTNAP5Q8WYK1 1306 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 STK36Q9NRP7 1315 aa9.18□□□□□ -0.94
HCG18-238ENST00000449544 SPTLC1O15269 473 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 SEC24BO95487 1268 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 GLUD1P00367 558 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 ANTXR2P58335 489 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 TMEM132DQ14C87 1099 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 ZNF410Q86VK4 478 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 CYP2W1Q8TAV3 490 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 SMG7Q92540 1137 aaKnown RBP9.17□□□□□ -0.94
HCG18-238ENST00000449544 ARMC5Q96C12 935 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 MIS12Q9H081 205 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 AGAP1Q9UPQ3 857 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 NEMP1O14524 444 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 AKR1B10O60218 316 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 TIMP1P01033 207 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 GUCY1A2P33402 732 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 ARL6IP4Q66PJ3 421 aaKnown RBP9.17□□□□□ -0.94
HCG18-238ENST00000449544 LMBR1Q8WVP7 490 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 TARS2Q9BW92 718 aaKnown RBP9.17□□□□□ -0.94
HCG18-238ENST00000449544 CUEDC2Q9H467 287 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 FARP1Q9Y4F1 1045 aaPredicted RBP9.17□□□□□ -0.94
HCG18-238ENST00000449544 N4BP1O75113 896 aaKnown RBP9.17□□□□□ -0.94
HCG18-238ENST00000449544 EYA4O95677 639 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 CRYBB1P53674 252 aaPredicted RBP9.17□□□□□ -0.94
HCG18-238ENST00000449544 ZNF792Q3KQV3 632 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.17□□□□□ -0.94
HCG18-238ENST00000449544 STKLD1Q8NE28 680 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 CLIC6Q96NY7 704 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms